Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N05
         (635 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q965X3 Cluster: Putative uncharacterized protein Y39A3C...    36   1.1  
UniRef50_A3DC12 Cluster: Putative uncharacterized protein; n=1; ...    34   2.5  
UniRef50_Q7S2D5 Cluster: Putative uncharacterized protein NCU059...    34   2.5  
UniRef50_Q553Q2 Cluster: Putative uncharacterized protein; n=1; ...    34   3.3  
UniRef50_Q54UG5 Cluster: G-protein alpha subunit family protein;...    33   4.4  
UniRef50_Q12151 Cluster: Sterol uptake control protein 2; n=2; S...    33   7.6  

>UniRef50_Q965X3 Cluster: Putative uncharacterized protein
           Y39A3CL.4; n=4; Caenorhabditis|Rep: Putative
           uncharacterized protein Y39A3CL.4 - Caenorhabditis
           elegans
          Length = 411

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 28/108 (25%), Positives = 45/108 (41%)
 Frame = +3

Query: 309 NNSSINDVSNKCQNLQIESDSDNGETEQVTPTTPSKGKNAXKKERLKKLEIXXXXXXXXX 488
           N+SS +    K + +  E +  +  T +   T  S GKN    E+LK +           
Sbjct: 10  NDSSKHKSDVKTEKVGSEIEKASNPTLEAYFTRISDGKNEISAEKLKSI----------- 58

Query: 489 XXXRVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLYASTSSTYLENL 632
              +   S  L  Y    TNS    H+ F  + TPLY +++  Y++ L
Sbjct: 59  --FQQDLSGSLMKYLTGDTNSNLVTHQQFMDKFTPLYGTSTDIYVKIL 104


>UniRef50_A3DC12 Cluster: Putative uncharacterized protein; n=1;
           Clostridium thermocellum ATCC 27405|Rep: Putative
           uncharacterized protein - Clostridium thermocellum
           (strain ATCC 27405 / DSM 1237)
          Length = 383

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = -2

Query: 454 NFFSRSFXLAFFPFDGVVGVT-CSVSPLSLSLSICKFWHLLETSLIDELLNTMVGTVTSD 278
           N  S  F     PFD  + +  C + P+++S+ I K   L E  +++  +  ++  + + 
Sbjct: 89  NGVSVFFFWILLPFDPQLKLAGCGIIPITVSIIIYKISKLYENRMLEGEIIKIISYLMAG 148

Query: 277 LCFFFDFLGV----RLGESTLFSFIAL 209
              +F F  +    RLG  TL+SFI L
Sbjct: 149 FSAYFMFKTLWPESRLGNLTLYSFIVL 175


>UniRef50_Q7S2D5 Cluster: Putative uncharacterized protein NCU05943.1;
            n=2; Sordariales|Rep: Putative uncharacterized protein
            NCU05943.1 - Neurospora crassa
          Length = 1050

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +1

Query: 142  QHAVNQQHRWSPRRQYHKKHQVTKQ*MKTKSIHLNEHPXXXXXXXXXXLQYLPWYSTIHQ 321
            Q+   Q H     +Q+H +HQV +Q  + +  HL +HP           Q  P +   HQ
Sbjct: 832  QNQQQQMHHQPHHQQHHPQHQVQQQQQQQQQQHLPQHPPQHQPHHQAHFQPQPQHQQQHQ 891


>UniRef50_Q553Q2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 702

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
 Frame = +3

Query: 309 NNSSINDVSNKCQNLQIESDSDNGETEQV-----TPTTPSKGKNAXKKERLKKL 455
           NN++I+D +N C NLQ + D +  + E++     TPTTP+  +N  ++  + +L
Sbjct: 209 NNNNIDDSNNSCNNLQ-KKDEELKKKEEIISTTTTPTTPAIVENIEEESEVDQL 261


>UniRef50_Q54UG5 Cluster: G-protein alpha subunit family protein;
           n=2; Dictyostelium discoideum|Rep: G-protein alpha
           subunit family protein - Dictyostelium discoideum AX4
          Length = 581

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +3

Query: 282 EVTVPTMVFNNSSINDVS---NKCQNLQIESDSDNGETEQVTPTTPSKGKNAXKKERLK 449
           + + PT   NN++ N+ S   N   N    S+++N ET +V  TT + G NA   + L+
Sbjct: 8   DTSTPTNTSNNNNNNNSSSSNNNNNNNSSSSNNNNNETTKVATTTATHGGNASDSQLLE 66


>UniRef50_Q12151 Cluster: Sterol uptake control protein 2; n=2;
           Saccharomyces cerevisiae|Rep: Sterol uptake control
           protein 2 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 913

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = -2

Query: 472 GTVGISNFFSRSFXLAFFPFDGVVGVTCSVSPLSLSLSICKFWHLLETSLID--ELLNTM 299
           GTVG  +  S S     F   G   +  +V PLS      KF +++   L D  +++N  
Sbjct: 717 GTVGNQSLNSMSPSAWIFHVKGAATILTAVWPLS---ERSKFHNIISVDLSDLGDVINPD 773

Query: 298 VGTVTSDLCF 269
           VGT+T  +CF
Sbjct: 774 VGTITELVCF 783


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,755,274
Number of Sequences: 1657284
Number of extensions: 10313446
Number of successful extensions: 31274
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31204
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)