Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N05
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   0.92 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   4.9  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   6.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.6  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.6  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 595 NGVICWVKYSCTENVLFVGDP 533
           +G+  WV Y C+   L VG P
Sbjct: 247 DGLQLWVDYGCSPKKLIVGIP 267


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 523 NKYCEFCTLFVL 488
           NKYC F  LF L
Sbjct: 319 NKYCNFIILFYL 330


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +3

Query: 504 QNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           Q+    FN+  +      S H Y+ Q   P Y
Sbjct: 278 QHEYNSFNWTANGHGHNTSSHNYYAQNYAPTY 309


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 375 YHCRFQFANS 346
           +HCRF+F++S
Sbjct: 75  HHCRFKFSSS 84


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 384 SPRYHCRFQFANS 346
           SPR+H  F  ANS
Sbjct: 73  SPRFHAYFPTANS 85


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 498 RVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           R Q S    +Y+    NST+    Y   Q+ P Y
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQY 52


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 498 RVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           R Q S    +Y+    NST+    Y   Q+ P Y
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQY 52


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 498 RVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           R Q S    +Y+    NST+    Y   Q+ P Y
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQY 52


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 498 RVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           R Q S    +Y+    NST+    Y   Q+ P Y
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQY 52


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 498 RVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           R Q S    +Y+    NST+    Y   Q+ P Y
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQY 52


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 498 RVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           R Q S    +Y+    NST+    Y   Q+ P Y
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQY 52


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 498 RVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           R Q S    +Y+    NST+    Y   Q+ P Y
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQY 52


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +3

Query: 498 RVQNSQYLFNYFGSPTNSTFSVHEYFTQQITPLY 599
           R Q S    +Y+    NST+    Y   Q+ P Y
Sbjct: 19  RDQQSSPGTDYYNPNANSTYPPACYSPPQVAPQY 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,579
Number of Sequences: 336
Number of extensions: 3036
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)