Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N05
         (635 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0115 + 20288220-20288303,20289223-20289706,20290160-202903...    30   1.3  
03_02_0087 + 5553730-5553842,5555221-5555353,5555887-5556023,555...    29   3.1  
03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394     28   5.4  
10_07_0139 + 13327851-13327880,13327999-13329049,13329089-133296...    27   9.4  
03_01_0256 - 1992298-1993878                                           27   9.4  
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    27   9.4  

>11_06_0115 +
           20288220-20288303,20289223-20289706,20290160-20290393,
           20291811-20292770,20292931-20293404,20293406-20294664
          Length = 1164

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/63 (23%), Positives = 29/63 (46%)
 Frame = -2

Query: 364 LSICKFWHLLETSLIDELLNTMVGTVTSDLCFFFDFLGVRLGESTLFSFIALSLDVFCGT 185
           L+ C FW+L     +D   N +VG++ + +  F     + L E+ LF  +   + +    
Sbjct: 48  LASCWFWNLTSLKYLDLSGNNIVGSLPAAVSKFTSLDTLDLSENQLFGSVPYEISMLTSL 107

Query: 184 DDV 176
            D+
Sbjct: 108 TDI 110


>03_02_0087 +
           5553730-5553842,5555221-5555353,5555887-5556023,
           5556254-5556311,5556403-5556642
          Length = 226

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 256 LGVRLGESTLFSFIALSLDVFCGTDDVETTDVVGSLHAASILNELW 119
           LG+RL +   F+F A++L V   T+D  +      L AA+IL  LW
Sbjct: 8   LGLRLAQ---FAFAAVALAVMASTNDFPSVTSFCFLVAAAILQCLW 50


>03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394
          Length = 1456

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 28/80 (35%), Positives = 37/80 (46%)
 Frame = -2

Query: 370  LSLSICKFWHLLETSLIDELLNTMVGTVTSDLCFFFDFLGVRLGESTLFSFIALSLDVFC 191
            L +S+CKF  LL TSL++E        VT+    F D L  RL   TLF+ IA     + 
Sbjct: 849  LVVSLCKFTTLLNTSLVEE-------PVTA----FGDDLKARLATETLFT-IANRYGDYI 896

Query: 190  GTDDVETTDVVGSLHAASIL 131
             T      D +  LH   +L
Sbjct: 897  RTGWRNVLDCILRLHKLGLL 916


>10_07_0139 +
           13327851-13327880,13327999-13329049,13329089-13329648,
           13329757-13329904,13330935-13331024,13331148-13331208,
           13331301-13331450,13331571-13331629,13332148-13332282,
           13333028-13333119,13333210-13333278
          Length = 814

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 324 NDVSNKCQNLQIESDSDNGETEQVTPTTPSKGK 422
           +  +NK  +  IESDSD+ +  +V P T S G+
Sbjct: 224 SQTANKPSSDPIESDSDSPQVVEVRPITRSLGR 256


>03_01_0256 - 1992298-1993878
          Length = 526

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -2

Query: 298 VGTVTSDLCFFFDFLGVRLGESTLFSFIALSLDVFCGTDDVETTDVVGSLHAASILNELW 119
           VGT+T  L  FF +LG R+G  +++    L + +      +   D   S+ A       W
Sbjct: 79  VGTLTGQL--FFGWLGDRVGRKSVYGMTLLLMIICSVASGLSFGDTPTSVMATLCFFRFW 136

Query: 118 L 116
           L
Sbjct: 137 L 137


>02_01_0369 +
           2649178-2655291,2655773-2656601,2656737-2657425,
           2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 282 EVTVPTMVFNNSSINDVSNKCQNLQIESDSDNGETEQV 395
           E+TV ++      IN  +NKC++L+ E  S    T+Q+
Sbjct: 448 ELTVASLT---DRINTSNNKCEHLEFELQSSKENTQQI 482


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,864,048
Number of Sequences: 37544
Number of extensions: 264448
Number of successful extensions: 757
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)