Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N05
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    26   1.1  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   2.0  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.0  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   3.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   4.6  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   6.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   8.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.1  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 381 ETEQVTPTTPSKGKNAXKKERLKKLE 458
           ETE++  T    GK++ +  RLKKLE
Sbjct: 337 ETEKLRRTVEQTGKSSAELVRLKKLE 362


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 333 SNKCQNLQIESDSDNGETEQVTPTTPSKGKNAXKK 437
           SNKC N Q+ +   +    Q   ++ S  KN+ ++
Sbjct: 79  SNKCSNQQLANTGSSNTQLQAAASSSSSKKNSSRR 113


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 109  PCQAITH*EWMQHAVNQQHRWSPRRQYHKKHQ 204
            P Q + H ++ Q    QQ +   ++Q H++HQ
Sbjct: 1296 PLQTLQH-QYQQQLQQQQQQQQQQQQQHQQHQ 1326


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
 Frame = -2

Query: 292 TVTSDLCFFFDFLGVRLGESTLFSFI--------ALSLDVFCGTDDVETTDVVGSLHAAS 137
           T+T  L   F F+ V +G +   SFI         L+  + C  D          L  A+
Sbjct: 208 TITILLLATFVFVSVSMGHAYRISFIESSATVQNILTHKIVCSWDYGIANGKAARLKHAT 267

Query: 136 ILNELWLDMAQKNK 95
           IL+EL   +AQ+N+
Sbjct: 268 ILSELRDYLAQRNR 281


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = -2

Query: 526 LNKYCEFCTLFVLLKLFTGTVGISNFFSRSFXLAFFPFDGVVGVTCSVSPLSLSLSICKF 347
           + ++C FC LF L  LF        F   SF +  + F     + CS  PL ++      
Sbjct: 3   VTQFCPFCLLFNLYFLFVVRGTGKPFLPTSFLI--YCFVSPSCLECSSVPLFINFIFMFL 60

Query: 346 WHLL 335
            H +
Sbjct: 61  LHFV 64


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 309 NNSSINDVSNKCQNLQIESDSDNGETEQVTPTTPSKGKNAXKK 437
           NN++ ++ S+ C N    + ++NG T      T   G N   K
Sbjct: 156 NNNNNSNSSSSCNNHVSSNTNNNGTTNGGGELTTGGGTNGCTK 198


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 133 EWMQHAVNQQHRWSPRRQYHKKHQVTKQ 216
           EW Q    QQH+   ++Q  +  Q  +Q
Sbjct: 259 EWQQQQQQQQHQQREQQQQQRVQQQNQQ 286


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 484 KLFTGTVGISNFFSRSFXLAF 422
           +LFT T G+S+F S  + +AF
Sbjct: 112 QLFTYTSGVSSFLSVWYVVAF 132


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 620 IRRAGTCIQWCNLLGKIFMHRECT 549
           +R  G  +Q CN+L   F  RE T
Sbjct: 591 LRDKGVPLQLCNILQDYFTDRELT 614


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,598
Number of Sequences: 2352
Number of extensions: 11758
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)