Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N05
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457104-1|CAG33385.1|  606|Homo sapiens ABCD4 protein.                32   2.0  
BT007412-1|AAP36080.1|  606|Homo sapiens ATP-binding cassette, s...    32   2.0  
BC012815-1|AAH12815.1|  606|Homo sapiens ATP-binding cassette, s...    32   2.0  
Y14318-1|CAA74699.1|  606|Homo sapiens peroxisomal ABC-transport...    31   2.6  
AF009746-1|AAB83967.1|  606|Homo sapiens peroxisomal membrane pr...    31   2.6  
BC030140-1|AAH30140.1|  271|Homo sapiens PQ loop repeat containi...    31   4.5  
AK026031-1|BAB15329.1|  170|Homo sapiens protein ( Homo sapiens ...    31   4.5  

>CR457104-1|CAG33385.1|  606|Homo sapiens ABCD4 protein.
          Length = 606

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
 Frame = -2

Query: 223 SFIALSLDVFCGTD--DVETT--DVVGSLHAASILNELWLDMAQKNKNCKIL-ISRYGV 62
           +F+ + L + C T   D+ TT  DV G  H    L E  LDM+ K+++C+IL  S++G+
Sbjct: 314 AFVCIYL-ISCFTQLIDLSTTLSDVAGYTHRIGQLRETLLDMSLKSQDCEILGESKWGL 371


>BT007412-1|AAP36080.1|  606|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 4 protein.
          Length = 606

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
 Frame = -2

Query: 223 SFIALSLDVFCGTD--DVETT--DVVGSLHAASILNELWLDMAQKNKNCKIL-ISRYGV 62
           +F+ + L + C T   D+ TT  DV G  H    L E  LDM+ K+++C+IL  S++G+
Sbjct: 314 AFVCIYL-ISCFTQLIDLSTTLSDVAGYTHRIGQLRETLLDMSLKSQDCEILGESKWGL 371


>BC012815-1|AAH12815.1|  606|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 4 protein.
          Length = 606

 Score = 31.9 bits (69), Expect = 2.0
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
 Frame = -2

Query: 223 SFIALSLDVFCGTD--DVETT--DVVGSLHAASILNELWLDMAQKNKNCKIL-ISRYGV 62
           +F+ + L + C T   D+ TT  DV G  H    L E  LDM+ K+++C+IL  S++G+
Sbjct: 314 AFVCIYL-ISCFTQLIDLSTTLSDVAGYTHRIGQLRETLLDMSLKSQDCEILGESKWGL 371


>Y14318-1|CAA74699.1|  606|Homo sapiens peroxisomal ABC-transporter
           protein.
          Length = 606

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = -2

Query: 223 SFIALSLDVFCGTD--DVETT--DVVGSLHAASILNELWLDMAQKNKNCKIL 80
           +F+ + L + C T   D+ TT  DV G  H    L E  LDM+ K+++C+IL
Sbjct: 314 AFVCIYL-ISCFTQLIDLSTTLSDVAGYTHRIGQLRETLLDMSLKSQDCEIL 364


>AF009746-1|AAB83967.1|  606|Homo sapiens peroxisomal membrane
           protein 69 protein.
          Length = 606

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = -2

Query: 223 SFIALSLDVFCGTD--DVETT--DVVGSLHAASILNELWLDMAQKNKNCKIL 80
           +F+ + L + C T   D+ TT  DV G  H    L E  LDM+ K+++C+IL
Sbjct: 314 AFVCIYL-ISCFTQLIDLSTTLSDVAGYTHRIGQLRETLLDMSLKSQDCEIL 364


>BC030140-1|AAH30140.1|  271|Homo sapiens PQ loop repeat containing
           1 protein.
          Length = 271

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 628 FSKYVELVLAYNGVICWVKYSCTENVLFV 542
           FS YV+ VLA+ GV  ++ Y   ++ LFV
Sbjct: 143 FSDYVQCVLAFTGVAGYITYLSIDSALFV 171


>AK026031-1|BAB15329.1|  170|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22378 fis, clone HRC07430. ).
          Length = 170

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 628 FSKYVELVLAYNGVICWVKYSCTENVLFV 542
           FS YV+ VLA+ GV  ++ Y   ++ LFV
Sbjct: 42  FSDYVQCVLAFTGVAGYITYLSIDSALFV 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,688,566
Number of Sequences: 237096
Number of extensions: 1565024
Number of successful extensions: 3182
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3179
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)