Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_N03
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0038 + 375893-376093,376758-376883,376978-377177,377411-37... 61 9e-10
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 52 5e-07
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 50 2e-06
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 50 2e-06
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 49 4e-06
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 44 8e-05
09_03_0035 - 11765108-11765376,11765909-11766005,11766505-117665... 32 0.35
02_02_0106 + 6814391-6817007,6817086-6817462 30 1.4
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 30 1.4
02_02_0109 + 6830802-6833412,6833491-6833861 30 1.9
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 29 2.4
05_05_0352 + 24328117-24328303,24328451-24328559,24330634-243306... 29 3.2
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 28 5.6
03_06_0075 - 31481395-31481452,31481675-31481964,31482068-314821... 27 9.9
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 27 9.9
>06_01_0038 +
375893-376093,376758-376883,376978-377177,377411-377502,
377966-378222,378610-378846,378986-379063,380422-380571,
380646-380720,381109-381205,381289-381341
Length = 521
Score = 60.9 bits (141), Expect = 9e-10
Identities = 29/79 (36%), Positives = 50/79 (63%)
Frame = +3
Query: 414 LSIMAAKSGADTIVACEAFQPMAECCLXILECNGVADKVTVIPKRSTELTVGENGDMKQK 593
L+ + ++ ++ ACE++ PM + +L NG+ ++V V KRS EL V + D+
Sbjct: 6 LAAVGGETRGGSVSACESYLPMGKLMRRVLRANGMENRVKVFHKRSDELKVRD--DLDSP 63
Query: 594 ANILVTEVFDTELIGEGAL 650
A+ILV+E+ D+EL+GEG +
Sbjct: 64 ADILVSEILDSELLGEGLI 82
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 51.6 bits (118), Expect = 5e-07
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +3
Query: 291 DMLHDTXRNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAF 470
+ML D R Y A + + +D + V+D+G G+G+LS+ AA++GA + A EA
Sbjct: 183 NMLQDFVRTGTYYAA----VMENRSDFEGRVVVDVGAGSGILSLFAAQAGARHVYAVEAS 238
Query: 471 QPMAECCLXILECN-GVADKVTVIPKRSTELTVGENGDMKQKANILVTEVFDTELIGEGA 647
+ MAE ++ N + ++TVI + E+ ++ +KA+IL++E T L+ E
Sbjct: 239 E-MAEHAQRLISGNPSLGQRITVIKGKVEEV------ELPEKADILISEPMGTLLVNERM 291
Query: 648 L 650
L
Sbjct: 292 L 292
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +3
Query: 291 DMLHDTXRNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAF 470
+ML D R + Y AL L + N A VLD+G GTG+LS+ AAK+GA ++A +
Sbjct: 268 EMLGDKVRTEAYRDAL-LGNPSLMNG---ATVLDVGCGTGILSLFAAKAGASRVIAVDGS 323
Query: 471 QPMAECCLXILECNGVA--DKVTVIPKRSTEL 560
M + + NG + + + KR T++
Sbjct: 324 AKMVSVATEVAKSNGFLYDENMEMQQKRDTQV 355
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/97 (32%), Positives = 52/97 (53%)
Frame = +3
Query: 294 MLHDTXRNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQ 473
M+ D R Y A+ + +GK V+D+G GTG+LS+ A++GA + A EA +
Sbjct: 61 MIKDRVRTDAYRSAIMH--HQKFIEGKV--VMDVGCGTGILSVFCARAGAKCVYAVEASE 116
Query: 474 PMAECCLXILECNGVADKVTVIPKRSTELTVGENGDM 584
MA I++ N + DKV V+ R ++ V + D+
Sbjct: 117 -MATQAREIVKANNLDDKVVVVHGRVEDVEVEDKVDV 152
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 48.8 bits (111), Expect = 4e-06
Identities = 35/98 (35%), Positives = 51/98 (52%)
Frame = +3
Query: 291 DMLHDTXRNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAF 470
+ML D R Y A+ H+ K VLD+GTG+G+L+I +A++GA + A EA
Sbjct: 44 EMLCDRVRMDAYHSAV---FRNAHHFRGKV-VLDVGTGSGILAIWSAQAGARKVYAVEAT 99
Query: 471 QPMAECCLXILECNGVADKVTVIPKRSTELTVGENGDM 584
MAE + N VAD V VI ++ + E D+
Sbjct: 100 N-MAEHARELARANDVADIVEVIQGSMEDVVLPEKVDV 136
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Frame = +3
Query: 384 VLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLXILECNGVADKVTVIPKRST--E 557
VLD+G GTG+LSI A +GA + A +A +A + I+ N ++DKV V+ R
Sbjct: 85 VLDVGCGTGVLSIFCAFAGAARVYAVDA-SDIALQAMEIVRENELSDKVIVLHGRIEYYY 143
Query: 558 LTVGENGD--MKQKANILVTEVFDTELIGEGAL 650
+ + EN D +++K +++++E L+ E L
Sbjct: 144 IRIFENQDVEIEEKVDVIISEWMGYMLLYESML 176
>09_03_0035 -
11765108-11765376,11765909-11766005,11766505-11766579,
11767367-11767650,11768466-11768562
Length = 273
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
Frame = +2
Query: 368 WKESQCLGYWHRYRA---PLHNG 427
W + C+G WH+YRA LHNG
Sbjct: 110 WHKDDCVGEWHKYRACLEKLHNG 132
>02_02_0106 + 6814391-6817007,6817086-6817462
Length = 997
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 138 SHKRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDM 239
S+ RF + + KMKVF N L+G WD+
Sbjct: 466 SNNRFSGPIPTLAGKMKVFRAANNLLSGEIPWDL 499
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 360 HNDGKKANVLDIGTGTGLLSIMAAKSG 440
+ D + +VLDIGTG+G LS AK G
Sbjct: 167 NKDLRSCSVLDIGTGSGRLSQQLAKQG 193
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 KYMNTIYKVTFFNYL-LASSHKRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDM 239
++ T K +N+ L S+ +F + + KMKVF N L+G WD+
Sbjct: 447 RFSGTFPKQLPWNFTRLDISNNKFSGPIPTLAGKMKVFIAANNLLSGEIPWDL 499
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +3
Query: 324 YSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLX-- 497
+S+A + H D K GT ++ A K G+ T+ A A+ CL
Sbjct: 211 FSQATPASNALSHEDIKALTKRTQDGGTEVVEAKAGK-GSATLSMAYAGAVFADACLKGL 269
Query: 498 -----ILECNGVADKVTVIPKRSTELTVGENG 578
++EC+ V VT +P ++++ +G+NG
Sbjct: 270 NGVPDVVECSFVQSTVTELPFFASKVRLGKNG 301
>05_05_0352 +
24328117-24328303,24328451-24328559,24330634-24330692,
24331139-24331220,24331361-24331481,24331751-24332278,
24332724-24332831,24332934-24333131,24334043-24334234,
24336116-24336199,24336385-24336525,24336683-24336748,
24336880-24337047,24337134-24337463,24337568-24337666
Length = 823
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 387 LDIGTGTGLLSIMAAKSGA 443
LD GTGTG+L I A K GA
Sbjct: 666 LDYGTGTGVLGIAALKMGA 684
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 345 AIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVAC-EAFQPMAECCLXILECNGVA 521
A+ K DG V++ G G ++ A +GA AC + + + ++EC+ V
Sbjct: 229 ALTKRTQDGG-TEVVEAKAGKGSATLSMAYAGAVFANACLKGLNGVPD----VVECSFVQ 283
Query: 522 DKVTVIPKRSTELTVGENG 578
VT +P ++++ +G+NG
Sbjct: 284 STVTELPFFASKVKLGKNG 302
>03_06_0075 -
31481395-31481452,31481675-31481964,31482068-31482141,
31483099-31483351
Length = 224
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 222 CTEWDMQDEXNDYHQEIARSAFADMLHDTXRNQKY 326
C+ WD E N QE+ + A M+ D+ + +Y
Sbjct: 96 CSCWDAYFELNKLEQELPKEEIARMVKDSEGDPRY 130
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 378 ANVLDIGTGTGLLSIMAAKSGAD 446
+ V+++G GT L ++AAK GAD
Sbjct: 83 STVVELGAGTSLPGLVAAKVGAD 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,576,068
Number of Sequences: 37544
Number of extensions: 290535
Number of successful extensions: 694
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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