Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_N03
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical ... 140 1e-33
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 43 2e-04
U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical pr... 32 0.41
M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein. 31 0.94
AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical ... 31 0.94
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 30 1.2
CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical... 30 1.6
CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical... 30 1.6
AF016420-6|AAB65311.3| 530|Caenorhabditis elegans Udp-glucurono... 30 1.6
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 29 2.2
Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical p... 29 3.8
AL009246-2|CAA15836.3| 362|Caenorhabditis elegans Hypothetical ... 28 6.7
AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm rece... 28 6.7
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 27 8.8
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 27 8.8
>AL034364-2|CAA22252.1| 630|Caenorhabditis elegans Hypothetical
protein W06D4.4 protein.
Length = 630
Score = 140 bits (338), Expect = 1e-33
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 2/156 (1%)
Frame = +3
Query: 189 VFTQKRNPLTGCTEWDMQDEXNDYHQEIARSAFADMLHDTXRNQKYSKALKLAIX--KMH 362
+F +K N TG EW + +E D QE+ARS F DM+ D RN K+ LK I K
Sbjct: 1 MFLEKINQKTGEREWVVAEEDYDMAQELARSRFGDMILDFDRNDKFLAGLKTTIAEKKHE 60
Query: 363 NDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECCLXILECNGVADKVTVIP 542
N K +VLDIGTGTGLLS+MAA+ GAD + A E F+PM +C I + +DK+TVI
Sbjct: 61 NTDGKVHVLDIGTGTGLLSLMAAREGADKVTALEVFKPMGDCARHITSNSPWSDKITVIS 120
Query: 543 KRSTELTVGENGDMKQKANILVTEVFDTELIGEGAL 650
+RST+ V + G +A+I+V EVFDTELIGEGAL
Sbjct: 121 ERSTD--VSQIGG--SRADIIVAEVFDTELIGEGAL 152
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/116 (33%), Positives = 59/116 (50%)
Frame = +3
Query: 294 MLHDTXRNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQ 473
M++D RN+ ++KAL I + V DIG+GTG+LS +AA+ + + A E
Sbjct: 145 MINDVKRNEAFAKALNDTIKS-----RITVVFDIGSGTGILSAIAARK-TNLVTALEENM 198
Query: 474 PMAECCLXILECNGVADKVTVIPKRSTELTVGENGDMKQKANILVTEVFDTELIGE 641
+ +L+ NGV +V V K ST E KA+I+V+E D + GE
Sbjct: 199 CLTMISKEVLKRNGVESRVNVHAKNSTYFETCE------KADIVVSETLDCCVFGE 248
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 291 DMLHDTXRNQKYSKALKLAIXKMHNDG--KKANVLDIGTGTGLLSIMAAKSGADTIVACE 464
+ML D R Y ++ HN K V+D+G+GTG+LS+ AAK+GA + A E
Sbjct: 39 EMLKDEVRTTTYRNSI------YHNSHLFKDKVVMDVGSGTGILSMFAAKAGAKKVFAME 92
Query: 465 AFQPMAECCLXILECNGVADKVTVIPKRSTELTVGENGDMKQKANILVTE 614
F MA I+ N + V VI + + V E +K +I+++E
Sbjct: 93 -FSNMALTSRKIIADNNLDHIVEVIQAKVED--VHELPGGIEKVDIIISE 139
>U40419-1|AAA81422.1| 283|Caenorhabditis elegans Hypothetical
protein C27F2.4 protein.
Length = 283
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 258 YHQEIARSAFADMLHDTX-RNQKYSKALKLAIXKMHNDGKKANVLDIGTGTGLLSIMAAK 434
Y+ E + +A H T +++ +AL+L +GK +LDIG GTG+ S +
Sbjct: 17 YYNETEAAKYASNSHITAIQHEMAERALELLALP---EGKSGFLLDIGCGTGMSSEVILD 73
Query: 435 SGADTIVACEAFQPMAE 485
+G V + +PM E
Sbjct: 74 AG-HMFVGVDVSRPMLE 89
>M93256-1|AAB59181.1| 1110|Caenorhabditis elegans tra-1 protein.
Length = 1110
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 583 ISPFSPTVSSVDLFGITVTLSATPLHSNIXRQHSAIG*KASQATIVSAPDFAAIMERSPV 404
+SPFSP + + L P +++ + +A A +VSAP A + +PV
Sbjct: 520 LSPFSPLLPPSRAPNVMAMLQTPPTPTSVAPMFDIMTSRAPMAPVVSAPTAPAPLVPAPV 579
Query: 403 P 401
P
Sbjct: 580 P 580
>AL117202-5|CAB61040.2| 1109|Caenorhabditis elegans Hypothetical
protein Y47D3A.6a protein.
Length = 1109
Score = 30.7 bits (66), Expect = 0.94
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 583 ISPFSPTVSSVDLFGITVTLSATPLHSNIXRQHSAIG*KASQATIVSAPDFAAIMERSPV 404
+SPFSP + + L P +++ + +A A +VSAP A + +PV
Sbjct: 519 LSPFSPLLPPSRAPNVMAMLQTPPTPTSVAPMFDIMTSRAPMAPVVSAPTAPAPLVPAPV 578
Query: 403 P 401
P
Sbjct: 579 P 579
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 372 KKANVLDIGTGTGLLSIMAAKSGADTIVACEAFQPMAECC 491
K VLDIG G GL S + GA +V + Q M E C
Sbjct: 37 KDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIENC 76
>CU457741-20|CAO82033.1| 206|Caenorhabditis elegans Hypothetical
protein C42C1.13b protein.
Length = 206
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 366 DGKKANVLDIGTGTGLLSIMAAKSGADTIV 455
+GKK VL++G+GTG+ I A GAD I+
Sbjct: 53 EGKK--VLELGSGTGVGGIALAALGADVII 80
>CU457741-19|CAM36356.1| 167|Caenorhabditis elegans Hypothetical
protein C42C1.13a protein.
Length = 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 366 DGKKANVLDIGTGTGLLSIMAAKSGADTIV 455
+GKK VL++G+GTG+ I A GAD I+
Sbjct: 14 EGKK--VLELGSGTGVGGIALAALGADVII 41
>AF016420-6|AAB65311.3| 530|Caenorhabditis elegans
Udp-glucuronosyltransferase protein7 protein.
Length = 530
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = -2
Query: 451 IVSAPDFAAIMERSPVPVPISKTLAFFPSLCIXSIASF------KALLYFWFLSVSCSIS 290
+V +FAA ++ P P S+ L FF + +A+ AL +W V CS+
Sbjct: 465 LVKHAEFAAEFKKLPELDPYSRHLNFFQFFFLDIVATLLILFMLSALFVYWITYVICSVR 524
Query: 289 AKADL 275
+K+ +
Sbjct: 525 SKSKM 529
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 399 TGTGLLSIMAAKSGAD-TIVACEAFQPMAECCLXILECNGVADKVTVIPKRSTELTV 566
T L+ I+ + G D TI+ A +P E C+ L + +V V+P R T ++V
Sbjct: 263 TANNLVFIIVSLHGIDSTIIMLWAHKPYREFCMRALAKLKLPVRVRVLPTRPTTISV 319
>Z99281-40|CAB16512.1| 268|Caenorhabditis elegans Hypothetical
protein Y57G11C.11a protein.
Length = 268
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 384 VLDIGTGTGLLSIMAAKSGAD 446
++D+G+G GLLSI A+SG D
Sbjct: 79 LVDVGSGGGLLSIPLARSGFD 99
>AL009246-2|CAA15836.3| 362|Caenorhabditis elegans Hypothetical
protein C47F8.2 protein.
Length = 362
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +3
Query: 72 RYACKYMNTIYKVTFFNYLLASSHKRFKSCVSRIGSKMKVFTQKRNPLTGCTEWDMQDEX 251
RY CK N +T R++SCV + G K + F Q+R ++ +
Sbjct: 45 RYLCKNSNNC--ITSPGQRTFCKACRYESCVDKAGMK-RDFVQQRRSTNATPKYILNSTS 101
Query: 252 NDYHQEIARSAFAD 293
++E+ R D
Sbjct: 102 GSSNREVVRGFITD 115
>AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm
receptor protein 68 protein.
Length = 337
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 575 IFTNSQFCRSFWDNSYLISHTIAF 504
+FT QFC +F NS+LI T+ +
Sbjct: 9 VFTKIQFCATFLINSFLILLTLCY 32
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 628 SVSNTSVTRMLAFCFISPFSPTVSSVDLFGIT 533
S+ +S + AF F +P +PT SS LFG T
Sbjct: 2 SLFGSSTPQKQAFTFPTPNAPTTSSGTLFGST 33
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 628 SVSNTSVTRMLAFCFISPFSPTVSSVDLFGIT 533
S+ +S + AF F +P +PT SS LFG T
Sbjct: 2 SLFGSSTPQKQAFTFPTPNAPTTSSGTLFGST 33
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,930,949
Number of Sequences: 27780
Number of extensions: 271849
Number of successful extensions: 769
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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