Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_M21
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 266 1e-71
Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like pro... 28 6.6
AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical ... 28 6.6
Z93386-3|CAB07648.1| 230|Caenorhabditis elegans Hypothetical pr... 27 8.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 27 8.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 27 8.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 27 8.7
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 266 bits (651), Expect = 1e-71
Identities = 122/161 (75%), Positives = 132/161 (81%)
Frame = +1
Query: 148 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQL 327
MGRRPARCYRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E L
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHL 60
Query: 328 SSXALEAGRICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFG 507
SS ALEA RIC NKY+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+G
Sbjct: 61 SSEALEAARICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYG 120
Query: 508 KPQGTVXRVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPG 630
KPQG V RV IG + S+R + IEA RRAKFKFPG
Sbjct: 121 KPQGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPG 161
>Z66511-7|CAD57693.1| 567|Caenorhabditis elegans Hypothetical
protein F07A11.6d protein.
Length = 567
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 582 LPPVTRAHGHDGLSNANTXYSTLRLAKRTTHPSLEPISSSA 460
+P VT A + LSN T ST LA T +L P+S A
Sbjct: 46 VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 512 GLPNAPRIPVWSLSAPA 462
G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>AF099919-10|AAC68792.1| 205|Caenorhabditis elegans Max-like
protein 2 protein.
Length = 205
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 208 RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSXALEAGR 354
R C + K I D K+ A ++ + +++ EYEQ++S +AG+
Sbjct: 93 RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141
>AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical
protein T05H4.9 protein.
Length = 539
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 14 GAYDXVFHLKSTLNLYLCFTCFLLNSKH*ICEN 112
G Y+ F + Y+CF+ F+++ KH +C N
Sbjct: 496 GCYNLAFIFCARCKEYICFSHFIVDEKH-LCPN 527
>Z93386-3|CAB07648.1| 230|Caenorhabditis elegans Hypothetical
protein R11H6.4 protein.
Length = 230
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +2
Query: 23 DXVFHLK-----STLNLYLCFTCFLLNSKH*ICENY*VSFCVYFRS 145
D VFHLK S +L LCFT FLL + C VS ++++S
Sbjct: 20 DFVFHLKTKKKRSGRSLRLCFTMFLLCNN--FCRLLVVSIILFYQS 63
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 270 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 169
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 270 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 169
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 593 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 270 RSLLTQIED--TDLGIRYTPTEPRFRIRFIFAVPVA 169
RS + IE +D+ + TP +P+ +F+F VPVA
Sbjct: 176 RSYMKLIETAISDILLHRTPIDPQADYKFVFEVPVA 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,365,374
Number of Sequences: 27780
Number of extensions: 341572
Number of successful extensions: 902
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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