Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M19
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   1.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   3.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   3.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   3.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   3.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   3.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   3.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   3.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   3.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 175 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 80
           K PG S     GD + + V  H     T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 584 IIHKFPXSNLMKSIIXVVAMSNWMESL 504
           II +F    L   +  VV +SNW E L
Sbjct: 239 IIARFNIERLCNGLKRVVKLSNWREPL 265


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 20  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 74


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/55 (21%), Positives = 22/55 (40%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A+     P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 169 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 80
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 37  MARGPKKHLKRLNAPKAWMLDKLG 108
           + R P +++K++N   A  LD+ G
Sbjct: 609 IGRSPDQNVKKINLKHALDLDRRG 632


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 169 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 80
           PG S +   GD++ + V  H +    ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201



 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 37  MARGPKKHLKRLNAPKAWMLDKLG 108
           + R P +++K++N   A  LD+ G
Sbjct: 609 IGRSPDQNVKKINLKHALDLDRQG 632


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +3

Query: 90  DVGQTWRCVCTETVNRSPQVARVLAPGDFPXESSEVCFD 206
           D+G + RC C++  + S     +      P ++   C D
Sbjct: 163 DIGNSHRCHCSDGYSGSYCQTEINECDSAPCQNGGTCLD 201


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 12/55 (21%), Positives = 21/55 (38%)
 Frame = +1

Query: 370 HRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIAT 534
           H + P    Y   + +R+A      P   TH   + +Y D       +   D++T
Sbjct: 64  HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLST 118


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 446 GTLLGPVATRLTLHNLXLASSGVIRW 369
           GT++GP    L L    +A+ G+ +W
Sbjct: 892 GTVIGPGTIFLMLVGAFVAAFGLDQW 917


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 446 GTLLGPVATRLTLHNLXLASSGVIRW 369
           GT++GP    L L    +A+ G+ +W
Sbjct: 892 GTVIGPGTIFLMLVGAFVAAFGLDQW 917


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,367
Number of Sequences: 336
Number of extensions: 3114
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)