Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_M19
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 278 3e-75
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 277 7e-75
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 276 1e-74
09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078 31 0.75
12_02_0513 - 19906147-19906271,19906470-19906791,19907091-199076... 29 4.0
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 28 5.3
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 28 5.3
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 28 7.0
02_04_0415 + 22706964-22707072,22707784-22708077,22708304-227084... 28 7.0
02_01_0285 - 1913425-1914065,1914094-1914177,1914249-1915140,191... 28 7.0
08_02_1359 + 26382605-26382815,26382907-26382998,26383722-263837... 27 9.2
04_01_0252 - 3329712-3331061 27 9.2
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 27 9.2
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 27 9.2
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 278 bits (681), Expect = 3e-75
Identities = 125/184 (67%), Positives = 149/184 (80%)
Frame = +1
Query: 40 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLXNRLKYALTGNEV 219
ARG KKHLKRLNAP WMLDKLGG +AP+PS+GPHK RECLPL++ L NRLKYALT EV
Sbjct: 18 ARGLKKHLKRLNAPSHWMLDKLGGAFAPKPSSGPHKARECLPLILILRNRLKYALTYREV 77
Query: 220 LKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAXY 399
+ I+ QR + VDGKVRTD TYPAGFMDVVSI KT E FRL+YD KGRF +H I E+A +
Sbjct: 78 ISILMQRHVMVDGKVRTDKTYPAGFMDVVSIAKTGENFRLLYDTKGRFRLHSIKDEDAKF 137
Query: 400 KLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFEXGNLC 579
KLCKV+ V G +P+L T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+
Sbjct: 138 KLCKVRSVQFGQKGIPFLNTNDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNIV 197
Query: 580 MITG 591
M+TG
Sbjct: 198 MVTG 201
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 277 bits (678), Expect = 7e-75
Identities = 123/185 (66%), Positives = 150/185 (81%)
Frame = +1
Query: 37 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLXNRLKYALTGNE 216
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ + NRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 217 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAX 396
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+A
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 397 YKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFEXGNL 576
+KLCKV+ V G +PYL T+DGRTIRYPDPLIK ND+I++D+ T KI+DFIKF+ GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 577 CMITG 591
M+TG
Sbjct: 181 VMVTG 185
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 276 bits (676), Expect = 1e-74
Identities = 122/185 (65%), Positives = 150/185 (81%)
Frame = +1
Query: 37 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLXNRLKYALTGNE 216
MARG KKHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPL++ + NRLKYALT E
Sbjct: 1 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60
Query: 217 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIXKTNELFRLIYDVKGRFTIHRITPEEAX 396
V+ I+ QR + VDGKVRTD TYPAGFMDV+SI KT E +RL+YD KGRF + + E+A
Sbjct: 61 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120
Query: 397 YKLCKVKRVATGPNNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFEXGNL 576
+KLCKV+ V G +PYL T+DGRTIRYPDP+IK ND+I++D+ T KI+DFIKF+ GN+
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180
Query: 577 CMITG 591
M+TG
Sbjct: 181 VMVTG 185
>09_04_0672 + 19367940-19368203,19368307-19368399,19368711-19370078
Length = 574
Score = 31.1 bits (67), Expect = 0.75
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 181 SGKSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 80
+G+SPG + RA GD L V+VH T++ W
Sbjct: 50 NGESPGPTIRAAQGDTLVVTVHNMLDTENTAIHW 83
>12_02_0513 -
19906147-19906271,19906470-19906791,19907091-19907695,
19908569-19908617
Length = 366
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 153 AQLVGTG*RSRCIHTAK-FVQHPCFGSV*ALQMLLRASR 40
++ V G R+RC+H A V+ P FG + ++L ASR
Sbjct: 39 SRAVKAGRRARCVHHASALVRPPSFGRLAMFVLILSASR 77
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +1
Query: 457 THDGRTIRYPDPLIKVNDSI-QLDIA---TTKIMDFIKFEXGNLCMITGR 594
+HD + + PDPL ND I ++ IA T ++D+ + + C + G+
Sbjct: 599 SHDDKVVSEPDPLPVHNDKIDEVTIAAIQTCALVDYQQSQQNKPCSVNGK 648
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = -1
Query: 146 LWGPVDGLGAYTPPSLSNIHALGAFKR 66
L G G+G Y PPSLSN + AFKR
Sbjct: 51 LLGHGHGVGVYYPPSLSNA-LVAAFKR 76
>08_02_0864 + 21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 78 SQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPXESS----EVCFDRKRSPENCETTP 242
+QS+ V + RCV ETV + P + R+ G+F + FD+ + +CE P
Sbjct: 894 NQSILVSLSSRCVWKETVCQRPHLLRIKYYGNFDKPLGRFLRDQLFDQNNNCISCELPP 952
>02_04_0415 +
22706964-22707072,22707784-22708077,22708304-22708416,
22708504-22709002,22709106-22709144,22709228-22709515,
22709766-22709905,22710468-22710960,22711082-22711356
Length = 749
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 343 YDVKGRFTIHRITPEEAXYKLCKVKRVATGPNNVPYLVTHDGRTIRYPD 489
+ V G T ITP EA + T N P +++H+G + YPD
Sbjct: 321 FSVDGVLTDFPITPSEAIGCFSNLNNSKTD-NAKPLIISHNGASGDYPD 368
>02_01_0285 -
1913425-1914065,1914094-1914177,1914249-1915140,
1915205-1915249,1915335-1915870,1915987-1916041
Length = 750
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 331 FRLIYDVKGRFTIHRITPEEAXYKLCKVKRVATGP 435
+ LIYD++G + + P++A L ++ V T P
Sbjct: 147 YALIYDIQGSLALPILDPDDASSPLAVLELVTTAP 181
>08_02_1359 +
26382605-26382815,26382907-26382998,26383722-26383791,
26383895-26384013,26384580-26384676,26384781-26384860,
26384986-26385180,26385460-26385520,26386408-26386468,
26386900-26386993,26387085-26387157,26387158-26387270,
26387444-26387587
Length = 469
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 226 FSGLRFRSKHTSDDSSGKSPGASTRATCG 140
FSGLR S+ S S SP A++ CG
Sbjct: 9 FSGLRLDSRRLSSSSLPTSPSAASSNGCG 37
>04_01_0252 - 3329712-3331061
Length = 449
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 145 CGDRLTVSVHTHRQVCPTSMLWERLSASNAS*GLAPCWTSIKS 17
C D+ V TH+ V P S W+R AS G W S
Sbjct: 112 CTDQERVGFATHQLVGPASEWWDRYEASRPE-GHTITWNEFSS 153
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 133 TGPHKL-RECLPLVIFLXNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 309
TGP+KL R C I + L LTG+ + + +++ G DP G V++
Sbjct: 365 TGPYKLVRRCEVTAILILYGLPRLLTGSILAHEMMHAYLRLKGYQTLDPKVEEGICQVLA 424
>02_05_0672 + 30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -3
Query: 300 IHKSSRISRVSPNFPINLYEALFHNFQDFVSG 205
+H+SS ++R++P F + Y L H + ++ G
Sbjct: 1024 LHRSSSVARIAPEFVV--YSELLHTKRSYMHG 1053
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,683,098
Number of Sequences: 37544
Number of extensions: 361206
Number of successful extensions: 1029
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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