Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_M16
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0655 - 19621717-19622594,19623186-19623227,19624323-196244... 81 1e-15
01_07_0269 - 42414345-42415328,42415419-42415551,42415939-424160... 36 0.021
10_08_0528 + 18562504-18562568,18563058-18563208,18563296-185633... 30 1.8
04_04_0998 - 29996117-29996242,29996345-29996486,29996613-299968... 30 1.8
04_04_1607 + 34750114-34750193,34750472-34750622,34750730-347507... 29 2.4
07_03_1576 - 27862043-27862129,27862935-27862988,27863042-278632... 29 3.2
06_03_0339 - 19687749-19690805 29 4.2
02_02_0211 + 7898434-7898574,7898759-7899349,7899575-7899821,790... 29 4.2
11_01_0223 + 1746203-1746228,1746344-1746463,1746942-1747062,174... 28 7.4
11_03_0093 - 9852075-9852871,9852911-9853009,9853208-9853646,985... 27 9.7
07_01_0711 + 5374717-5374992,5375022-5375277,5375317-5375384,537... 27 9.7
06_02_0335 - 14591512-14591772,14594021-14594215,14594379-145946... 27 9.7
05_03_0632 - 16404169-16405043,16405248-16405983,16406113-164065... 27 9.7
02_05_1213 - 34963971-34964658,34965030-34965270,34965347-349657... 27 9.7
>10_08_0655 -
19621717-19622594,19623186-19623227,19624323-19624479,
19625333-19625405,19625483-19625595
Length = 420
Score = 80.6 bits (190), Expect = 1e-15
Identities = 42/144 (29%), Positives = 68/144 (47%)
Frame = +3
Query: 123 ICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHLXCSENFYRDWVNEELSSQNVDEESKRK 302
IC +C++Q ++Y CP+C YCSL CYK + C+E+F R+ V +EL ++ESK+K
Sbjct: 35 ICRVCQKQFAQYTCPRCNARYCSLPCYKGHS-VQCTESFMRENVMDELKQMQPEDESKKK 93
Query: 303 MIEILKKMQNESXXXXXXXXXXXXXXXXXXXXXXXXXRIKNLXINDADAIWSALTEXEKN 482
M++ILK+ E IK + D L++ E
Sbjct: 94 MLDILKRFHLEEEDMDSEGEDESILSEELIQKVMSGDEIK---LED-------LSDDEIK 143
Query: 483 EFEALISQXDVGSILPQWEPWWTK 554
F ++ ++ ++ W PWW K
Sbjct: 144 RFRQALASGELSKMIEPWTPWWKK 167
>01_07_0269 -
42414345-42415328,42415419-42415551,42415939-42416007,
42416459-42416672,42416785-42417040
Length = 551
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 126 CGLCEEQKSKYCCPKCGILYCSLGCYKSDK 215
C C EQ KY CP C L CSL C +S K
Sbjct: 29 CEECGEQPWKYRCPGCSRLTCSLPCVQSHK 58
>10_08_0528 +
18562504-18562568,18563058-18563208,18563296-18563362,
18563470-18563704,18564655-18564865
Length = 242
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +3
Query: 66 RRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHLXCSENFYR 245
RR DE + + + CG+C E SK P C C L CY+ S F R
Sbjct: 126 RRDEDERNILSEIDAEREEECGICMEMNSKVVLPNCTHNMC-LRCYQDWNSRSQSCPFCR 184
Query: 246 D 248
D
Sbjct: 185 D 185
>04_04_0998 -
29996117-29996242,29996345-29996486,29996613-29996812,
29997112-29997497,29997769-29998318,29998949-29999296
Length = 583
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 123 ICGLCEEQKSKYCCPKCGILYCSL---GCYKSDKHLXCSENFYRDWVNEELSSQNVDEE 290
+ G E++ + CPKC +CS C+ + L E R + +S + V +E
Sbjct: 383 VIGCLEDEDNNAQCPKCSFFFCSFCKEPCHPRRQCLTPEEKLQRRQASGRMSEREVAQE 441
>04_04_1607 +
34750114-34750193,34750472-34750622,34750730-34750796,
34750905-34751142,34751903-34752113
Length = 248
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 126 CGLCEEQKSKYCCPKCGILYCSLGCYKSDKHLXCSENFYRD 248
CG+C E +K P C C + CY+ + S F RD
Sbjct: 152 CGICMEMNNKVVLPNCSHAMC-MKCYRQWRSRSQSCPFCRD 191
>07_03_1576 -
27862043-27862129,27862935-27862988,27863042-27863243,
27865015-27865249,27865338-27865404,27865489-27865639,
27866898-27866957,27867402-27867466
Length = 306
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +3
Query: 66 RRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHLXCSENFYR 245
RR D+ ++ + CG+C E K P C C + CY+ + S F R
Sbjct: 146 RRDEDQKMVISEIDDNIEEECGICMEINGKVVLPTCSHAMC-IKCYRDWRSRSQSCPFCR 204
Query: 246 D 248
D
Sbjct: 205 D 205
>06_03_0339 - 19687749-19690805
Length = 1018
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +3
Query: 477 KNEFEALISQXDVGSILPQWEPWWTKRTKSKLXTXVCDDELDK---NVDTCXQLKNVQKL 647
+NE+E + Q D+ ++ W WT + K CD EL + + D+ Q++ ++K+
Sbjct: 899 RNEYEIVPCQGDIWAVFKNWRTGWTAKDYKK-----CDYELVEIFGHTDSSIQVQLLRKV 953
>02_02_0211 +
7898434-7898574,7898759-7899349,7899575-7899821,
7900020-7900118,7900158-7900321,7900371-7900870,
7901007-7901256,7901461-7901549,7901823-7902064,
7902175-7902479,7902798-7902906,7903150-7903313
Length = 966
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 57 STTRRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHL 221
ST +R + T+ K+TE I E+K P C + CS+G + D+ L
Sbjct: 426 STNKRPLPTTEVVKLTEQCSDLILHKLAEKKKD---PGCPTITCSIGAQQFDQAL 477
>11_01_0223 +
1746203-1746228,1746344-1746463,1746942-1747062,
1747441-1747572,1748266-1748375,1748465-1748648,
1749153-1749305,1749672-1749818
Length = 330
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +3
Query: 156 YCCPKCGILYCSLGCYKSDKHLXCSENFYRDWVNEELS 269
Y CP C Y SL H+ NF+ NEELS
Sbjct: 162 YVCPNCERRYSSLNALDLVSHI--DNNFHCKHCNEELS 197
>11_03_0093 -
9852075-9852871,9852911-9853009,9853208-9853646,
9853803-9854129
Length = 553
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 54 ISTTRRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHL 221
I +R++ T+ K+TE I E+K P+C + CS+ ++ D+ L
Sbjct: 370 ILNNKRLLPTTEVVKLTEQCNDVILHKLPEKKKD---PRCPTITCSIRAHQFDRAL 422
>07_01_0711 +
5374717-5374992,5375022-5375277,5375317-5375384,
5375556-5376287,5377013-5377270
Length = 529
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +3
Query: 54 ISTTRRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHL 221
I +R++ + K+TE I E+K P C ++ CS+G + DK L
Sbjct: 202 ILNNKRLLPTMEVVKLTEQCNNVILHKLPEKKKD---PGCPMITCSIGAQQFDKAL 254
>06_02_0335 -
14591512-14591772,14594021-14594215,14594379-14594679,
14594930-14595051,14595287-14595466,14595514-14596337,
14596377-14596435,14596480-14597075
Length = 845
Score = 27.5 bits (58), Expect = 9.7
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 LQTKVVQT-AKYSDTVVISTTRRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGIL 182
L T V T A+Y ++ +R + T+ K+TE++ I E+K P C +
Sbjct: 285 LDTMQVPTYARYLKDIL--NNKRPLPTTEVVKLTEHSSNIILPKLPEKKKD---PGCPTI 339
Query: 183 YCSLGCYKSDKHL 221
CS+G + D+ L
Sbjct: 340 TCSIGAQRFDQAL 352
>05_03_0632 -
16404169-16405043,16405248-16405983,16406113-16406512,
16406717-16406727
Length = 673
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 54 ISTTRRIMDETDTTKITENTFAKICGLCEEQKSKYCCPKCGILYCSLGCYKSDKHL 221
I +R + T+ K+TE+ I E+K P C ++ CS+G + D+ L
Sbjct: 409 ILNNKRPLPTTEVVKLTEHCSNVILNKFPEKKKD---PGCPMITCSIGAQQFDQAL 461
>02_05_1213 -
34963971-34964658,34965030-34965270,34965347-34965736,
34966515-34966781,34966881-34967249,34967931-34968014,
34968113-34968226,34969952-34970018
Length = 739
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 246 HDRNFLNTXNVCLIYNNRANNIIYHILGNNTCFSVLH 136
H RN + +C+ +N R ++Y ++ N + S LH
Sbjct: 396 HHRNLVKLIGICIEHNKRC--LVYELIRNGSVESHLH 430
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,474,402
Number of Sequences: 37544
Number of extensions: 204200
Number of successful extensions: 599
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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