Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M16
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    26   0.89 
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    26   0.89 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   4.8  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 53  NQYHSKNNGRNRYNEDHRKY 112
           N ++S+NN  N  NE H  Y
Sbjct: 139 NWFYSRNNNNNNNNEHHNTY 158


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 26.2 bits (55), Expect = 0.89
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 53  NQYHSKNNGRNRYNEDHRKY 112
           N ++S+NN  N  NE H  Y
Sbjct: 139 NWFYSRNNNNNNNNEHHNTY 158


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 228 SENFYRDWVNEELSSQNVDEE 290
           ++ F  D++NE L   N DEE
Sbjct: 874 AKQFANDYINEVLHEDNEDEE 894


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,295
Number of Sequences: 2352
Number of extensions: 8188
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)