Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_M15
(647 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.58
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 28 1.0
SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1 ... 26 5.4
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 26 5.4
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 26 5.4
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 25 7.1
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 25 7.1
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 25 9.4
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ... 25 9.4
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 29.1 bits (62), Expect = 0.58
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = -3
Query: 441 NTIQTKVKIYVMIIKTAHDILPP-----TRALHAR-*TFWRVAPVVKQPRQSNINPSAAM 280
N I T V++Y I+KT I PP ++ L AR T R V+Q QS + A+
Sbjct: 72 NDISTIVQLYEEIVKTGFFINPPPFESYSQTLVARITTLGRPKLQVQQEAQSEVYQRAST 131
Query: 279 HALPTMNIICRASIQINRKWNTSSN 205
+ ++ + + + N NT N
Sbjct: 132 NTQQQVSNVSHGNFKPNSSVNTEPN 156
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 28.3 bits (60), Expect = 1.0
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
Frame = +1
Query: 301 VTLSRLFDYRCNSPESLSGVESSGRWENIVCRFYDHNIYFDLCL-------DSVAXISS- 456
++ S+ F+Y+ N+ S S V S + E +V + + N FDL + D V SS
Sbjct: 355 LSASKEFNYKLNALISWSNVMESIQVETLVLQKWVGNDEFDLTMRTPQFNYDGVENTSSF 414
Query: 457 NNNIFVHNILEIMFKTRKYCIINLYRFHSIRLHVSFNGEARXHENMRTTQNK 612
IF + L+ F+ R +N H + +S N +A + T ++K
Sbjct: 415 VERIFRQSGLQRTFEQRTLTTLNRI-IHQAKQTISENAQAFEEMKLPTYEDK 465
>SPBC17D11.04c |||histone acetyltransferase complex subunit Nto1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 193 LHPYVRRSIPLSIDLD 240
+HPY + S P+S DLD
Sbjct: 119 IHPYSKTSFPVSYDLD 134
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 609 ILCGSHIFMXSCFTVEGNMKSN*VKSIQVDDTIFSGFE 496
I G H C+++ N S+ + I TIF G E
Sbjct: 354 IFSGGHDGTIRCWSLPANQTSDSISKILTGSTIFQGHE 391
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 468 FCSQYSGNYVQNQKILYHQLV*ISLNST 551
FC+Q S N Q +L+ L LNST
Sbjct: 325 FCNQLSNNLAYQQNLLFTSLNVSDLNST 352
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 85 VSSLSNTGATCNPYRYNNVLSRRGCVLWDHVPWICTLHPYVRRSIPLSIDLD 240
+ SL + A+ N Y Y NV S G V+ W+ +L Y + L+ +L+
Sbjct: 296 LESLRHYTASLNEYYYQNVYSANGMVM---SRWVDSLSAYFPGLLVLAGELE 344
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 498 EHNFQNIVNKNVVITRNXSNTI 433
+ +QN VNK +V TRN N +
Sbjct: 633 DEKWQNFVNKTLVETRNRDNQL 654
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1
Query: 343 ESLSGVESSGRWENIVCRFYDHNIYFDLCLDSVAXISSNNNIFVHNILEIMFK 501
E+++ E+ W + + F H + +CL + +NN FV L +F+
Sbjct: 163 ETMTLKEAEQAWRDQMAAFSPHRMMVQVCLYFLCWGEANNVRFVPECLCFIFE 215
>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 9.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 49 KVNKN*QNNGGRVSSLSNTGATCNPYRYNNVLSR 150
K NKN +N RV L+ + ++ + Y+ VLSR
Sbjct: 37 KENKNLLSNAARVKLLTFSSSSPYSFSYSPVLSR 70
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,853,232
Number of Sequences: 5004
Number of extensions: 62237
Number of successful extensions: 181
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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