Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M15
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.8  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   6.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.3  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   6.3  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 442 QHYPNKGQNICYDHKNGTRYSPTDPSSPR 356
           Q + ++GQ+    H NGT + P+  SS R
Sbjct: 651 QAHQHQGQHHAQHHSNGTHHGPSLMSSAR 679


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 183  PRYMVPQNTPTPRQHIIVAIRVAC 112
            P YM  +  P  R H+   I++AC
Sbjct: 970  PDYMFLRQVPIRRVHLFTMIQLAC 993


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 185 SALSILMFDEVFHFRLIWIEALQ 253
           SA +ILM     +FR +W EA Q
Sbjct: 107 SADTILMIVNTLYFRGLWEEAFQ 129


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 58  KN*QNNGGRVSSLSNTGATCNPYRYNNVLS 147
           K   NN    ++ SNTGAT N    N  LS
Sbjct: 96  KTNNNNNNNNNNGSNTGATVNSGSSNAALS 125


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 637 FNVIFAKKFYFVWFAYFHVFL 575
           FN  F + F+ ++  YFH FL
Sbjct: 8   FNKFFLEFFFDIFQLYFHSFL 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,996
Number of Sequences: 2352
Number of extensions: 17310
Number of successful extensions: 74
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)