Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M14
         (575 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CCA83 Cluster: hypothetical protein TTHERM_0028...    33   4.8  
UniRef50_A1VMS8 Cluster: Putative uncharacterized protein; n=2; ...    33   4.8  
UniRef50_Q9MZ01 Cluster: Melanin-concentrating hormone receptor ...    33   4.8  
UniRef50_Q99705 Cluster: Melanin-concentrating hormone receptor ...    33   4.8  
UniRef50_Q5ULL6 Cluster: Orf98; n=1; Lactobacillus phage LP65|Re...    33   6.4  

>UniRef50_UPI00006CCA83 Cluster: hypothetical protein
           TTHERM_00283770; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00283770 - Tetrahymena
           thermophila SB210
          Length = 408

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +1

Query: 238 EKSSFTEGNIFNGFLNVEIXRNAMEATLAVCLVFFVLWMLFSWLLLVGLFKNKPCLVLSY 417
           +KSS   G+I N   + +   N + A+  + ++ ++LW +F  L + GL  +K   V  Y
Sbjct: 223 DKSSTGFGSINNNSNDGDSPNNLLRASAVISIIEYILWFIFIILAIHGLTSSKLHFVRYY 282

Query: 418 LSYGII 435
           +  G+I
Sbjct: 283 IK-GLI 287


>UniRef50_A1VMS8 Cluster: Putative uncharacterized protein; n=2;
           Betaproteobacteria|Rep: Putative uncharacterized protein
           - Polaromonas naphthalenivorans (strain CJ2)
          Length = 459

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +1

Query: 280 LNVEIXRNAMEATLAVCLVFFVLWMLFSWLLL 375
           LNV    +  +A L +CL+FFV   LFSWL L
Sbjct: 383 LNVLFYLDQRQAALGLCLLFFVSNTLFSWLSL 414


>UniRef50_Q9MZ01 Cluster: Melanin-concentrating hormone receptor 1;
           n=4; Eutheria|Rep: Melanin-concentrating hormone
           receptor 1 - Sus scrofa (Pig)
          Length = 121

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 298 RNAMEATLAVCLVFFVLWMLFSWLLLVGLFKNKPCLVLSYL 420
           +      +A+CLVFFV W  +  L L  L  ++P L   YL
Sbjct: 28  KRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVYL 68


>UniRef50_Q99705 Cluster: Melanin-concentrating hormone receptor 1;
           n=33; Euteleostomi|Rep: Melanin-concentrating hormone
           receptor 1 - Homo sapiens (Human)
          Length = 422

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 298 RNAMEATLAVCLVFFVLWMLFSWLLLVGLFKNKPCLVLSYL 420
           +      +A+CLVFFV W  +  L L  L  ++P L   YL
Sbjct: 321 KRVTRTAIAICLVFFVCWAPYYVLQLTQLSISRPTLTFVYL 361


>UniRef50_Q5ULL6 Cluster: Orf98; n=1; Lactobacillus phage LP65|Rep:
            Orf98 - Lactobacillus phage LP65
          Length = 1273

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = -1

Query: 407  TKHGLFLKSPTSSSQEKSIHSTKKTRQTARVASIAFLL---ISTLRKPLKMFPSVKELFS 237
            T+HG    S +SSS+ KS+  +K T+  + + S+A LL      L K  K+    K + S
Sbjct: 938  TQHGKKSDSNSSSSKNKSLSKSKSTKSESVIESLADLLKGFNDMLDKASKVIADAKSIKS 997

Query: 236  SS 231
            SS
Sbjct: 998  SS 999


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,416,381
Number of Sequences: 1657284
Number of extensions: 8325966
Number of successful extensions: 20488
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20486
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)