Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M14
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016656-4|AAB66039.3|  429|Caenorhabditis elegans Hypothetical ...    30   1.0  
Z82083-6|CAB04974.1|  388|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U53151-2|AAN73859.1|  385|Caenorhabditis elegans Serpentine rece...    28   5.5  
U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeo...    28   5.5  
AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protei...    28   5.5  

>AF016656-4|AAB66039.3|  429|Caenorhabditis elegans Hypothetical
           protein C35A11.1 protein.
          Length = 429

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 2/29 (6%)
 Frame = +1

Query: 355 LFSW-LLLVG-LFKNKPCLVLSYLSYGII 435
           LF W + ++G LFK  PC++L +LS+G++
Sbjct: 221 LFKWNIWMIGILFKIIPCILLIFLSFGLV 249


>Z82083-6|CAB04974.1|  388|Caenorhabditis elegans Hypothetical
           protein ZK1010.8 protein.
          Length = 388

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 301 NAMEATLAVCLVFFVLWMLFSWLLLVGLFKNKPCLV 408
           NAM   + VC++F +L +L S LLL   FK    L+
Sbjct: 79  NAMYVIIIVCVIFAILNLLTSVLLLYAAFKYLKVLI 114


>U53151-2|AAN73859.1|  385|Caenorhabditis elegans Serpentine
           receptor, class r protein10 protein.
          Length = 385

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 13/54 (24%), Positives = 24/54 (44%)
 Frame = +1

Query: 271 NGFLNVEIXRNAMEATLAVCLVFFVLWMLFSWLLLVGLFKNKPCLVLSYLSYGI 432
           N  L + +  N   ++L     FF+LW L + + +   F + P L    L + +
Sbjct: 231 NEILEMILVTNGSLSSLGGFAPFFLLWSLINGIYITSFFNSNPLLYSIILGFNL 284


>U41017-5|AAC48216.2|  495|Caenorhabditis elegans C.elegans homeobox
           protein 21 protein.
          Length = 495

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
 Frame = +3

Query: 273 RLS*RGNQXECNGSYSGCLPRLLCTVDALLLAATRW---TLQKQTVFSAQLSFLR--DNI 437
           R S +  + E  G+ S C P++  T +    A  R    T++  +   + +S      + 
Sbjct: 175 RASSKSQEKEVPGTKSQCAPKIRTTPEQSKAATKRQSSTTVRASSTCGSSVSSTSTVSSP 234

Query: 438 DYNATTGRITVTPK 479
           DY A  GR T TPK
Sbjct: 235 DYTAKKGRATETPK 248


>AJ427855-1|CAD20808.1|  495|Caenorhabditis elegans CEH-21 protein
           protein.
          Length = 495

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
 Frame = +3

Query: 273 RLS*RGNQXECNGSYSGCLPRLLCTVDALLLAATRW---TLQKQTVFSAQLSFLR--DNI 437
           R S +  + E  G+ S C P++  T +    A  R    T++  +   + +S      + 
Sbjct: 175 RASSKSQEKEVPGTKSQCAPKIRTTPEQSKAATKRQSSTTVRASSTCGSSVSSTSTVSSP 234

Query: 438 DYNATTGRITVTPK 479
           DY A  GR T TPK
Sbjct: 235 DYTAKKGRATETPK 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,444,485
Number of Sequences: 27780
Number of extensions: 218231
Number of successful extensions: 616
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)