Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M10
         (595 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79600-3|CAB01876.1|  260|Caenorhabditis elegans Hypothetical pr...   146   1e-35
AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical...    31   0.82 
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    31   0.82 
AC024798-1|AAK29914.3|  722|Caenorhabditis elegans Hypothetical ...    27   7.6  

>Z79600-3|CAB01876.1|  260|Caenorhabditis elegans Hypothetical
           protein F59C6.5 protein.
          Length = 260

 Score =  146 bits (353), Expect = 1e-35
 Identities = 65/148 (43%), Positives = 93/148 (62%), Gaps = 2/148 (1%)
 Frame = +3

Query: 93  NVFRAFCNALYNTVDAPVTWFRETVVEP--NQKKYPWYHQNYRRVPTIDQCYDDDVVCDF 266
           +++  F    +   DAP TWFRET+V+P  N+ + P+YH+   RVP ID+C  +D  C +
Sbjct: 31  SIYPRFRYYAHKAFDAPATWFRETIVQPLNNKNRLPYYHRQLTRVPEIDECGVNDKACFY 90

Query: 267 EANAQFKRXRAVDSXILSILRQRYEXCMMYEQPDHATKCRSLWDKYKSAEEAWFIKYGDL 446
           EAN Q++  + VD  IL  LRQR + CM+Y  PDH + C  + +  +  E  +F+KYG+L
Sbjct: 91  EANEQYRLDKMVDGFILQTLRQRVDRCMLYNNPDH-SPCAKVIEDMEENELNFFMKYGEL 149

Query: 447 GAYGDARKAYMKXKHRMVWERRNGPLSD 530
           G   D R AYMK KHRM+WERR+  + D
Sbjct: 150 GGESDVRDAYMKQKHRMIWERRHPEIMD 177


>AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32b protein.
          Length = 216

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 447 GAYGDARKAYMKXKHRMVWERRNGPLSDLTK*SFKSVINSR 569
           GAYGD    Y   + + +W++  GP  D T   F   ++SR
Sbjct: 75  GAYGDVGSVYGIAQQKRIWQKPRGP--DATSEEFAHSVSSR 113


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +3

Query: 447 GAYGDARKAYMKXKHRMVWERRNGPLSDLTK*SFKSVINSR 569
           GAYGD    Y   + + +W++  GP  D T   F   ++SR
Sbjct: 243 GAYGDVGSVYGIAQQKRIWQKPRGP--DATSEEFAHSVSSR 281


>AC024798-1|AAK29914.3|  722|Caenorhabditis elegans Hypothetical
           protein Y48G9A.10 protein.
          Length = 722

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = -3

Query: 506 FPDHAMLXLHVSFSRITISTEVTIFNEPSFLSRLVLVPKRPAFSCMVW 363
           FP   +    +S+S + +   +  +   S+   L   PK+P+++ +VW
Sbjct: 59  FPQDLLKSFFISYSLVFLLRHILKYTYFSYKGYLKESPKKPSYATIVW 106


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,088,814
Number of Sequences: 27780
Number of extensions: 233521
Number of successful extensions: 587
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)