Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M09
         (575 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1091 + 24256025-24256190,24256806-24257978,24258066-242587...    34   0.093
11_08_0073 - 28155156-28155296,28155422-28155682,28155858-281559...    31   0.50 
07_01_0908 + 7653813-7653849,7655220-7655350,7655946-7656020,765...    30   1.1  
09_04_0512 + 18226981-18227143,18227648-18229555,18229649-182302...    28   6.1  

>08_02_1091 + 24256025-24256190,24256806-24257978,24258066-24258733,
            24258994-24260065,24260241-24260563,24260647-24260835,
            24261400-24261506,24262103-24262163,24262617-24262634
          Length = 1258

 Score = 33.9 bits (74), Expect = 0.093
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = +1

Query: 97   CIQRKL**IFLRKAPTVK--EIQRQNDRDLRKAGRDLXRDKANLXREEK 237
            C++R +    L  A  VK  E ++QN+R++RKA  +L R++    RE+K
Sbjct: 1026 CVKRDVRVKALEVAEAVKRREQKKQNEREMRKAAAELERERVKQEREQK 1074


>11_08_0073 -
           28155156-28155296,28155422-28155682,28155858-28155962,
           28156563-28156693,28156905-28156941
          Length = 224

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +1

Query: 133 KAPTVKEIQRQNDRDLRKAGRDLXRDKANLXREEKKLXSK 252
           K  T  E+ R+N R L K+ R++ R++  L  +EKKL ++
Sbjct: 7   KRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIAE 46


>07_01_0908 +
           7653813-7653849,7655220-7655350,7655946-7656020,
           7657007-7657111,7657648-7657911,7658474-7658614
          Length = 250

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 133 KAPTVKEIQRQNDRDLRKAGRDLXRDKANLXREEKKLXSK 252
           K  T  E+ R+N R L ++ R++ R++  L  +EKKL ++
Sbjct: 7   KRKTPAELLRENKRMLDRSIREIERERQGLQAQEKKLITE 46


>09_04_0512 + 18226981-18227143,18227648-18229555,18229649-18230295,
            18230710-18231949,18232085-18232419,18232500-18232577,
            18232872-18232978,18233020-18233062
          Length = 1506

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 97   CIQRKL**IFLRKAPTVKEIQ--RQNDRDLRKAGRDLXRDKANLXREEKKLXSK 252
            C+++ +    L  A   K ++  +QN+R++RKA   L R++    ++EK+L  K
Sbjct: 1319 CVKKDVRVKALEAAEAAKRLEEKKQNEREMRKAAAKLERER---LKQEKELKQK 1369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,538,309
Number of Sequences: 37544
Number of extensions: 150383
Number of successful extensions: 268
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 268
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)