Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_M04
(526 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0034 - 228939-229028,229117-229230,229309-229430,229827-23... 113 6e-26
04_03_0650 - 18411588-18411645,18412020-18412172,18412340-184124... 48 5e-06
04_04_1468 + 33811471-33811657,33811888-33811980,33812899-338130... 46 1e-05
08_02_1145 - 24674319-24674403,24674691-24674746,24674885-246749... 32 0.32
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 31 0.75
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 30 0.99
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 30 1.3
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 29 1.7
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 29 2.3
07_03_1709 - 28873172-28873327,28873519-28873584,28874067-288741... 29 3.0
11_01_0433 - 3323372-3324616,3324708-3324905 28 4.0
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 28 4.0
05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834... 28 5.3
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 28 5.3
10_01_0267 - 2828966-2829340,2831164-2831629,2833390-2833487,283... 27 9.2
03_02_0338 + 7614199-7614450,7614518-7614703,7614815-7614927,761... 27 9.2
01_06_1089 - 34451982-34452670,34452755-34452814,34453287-344533... 27 9.2
01_01_0137 + 1249081-1249341,1249500-1250237 27 9.2
>05_01_0034 -
228939-229028,229117-229230,229309-229430,229827-230056,
230458-230537,230641-230859
Length = 284
Score = 113 bits (273), Expect = 6e-26
Identities = 56/145 (38%), Positives = 83/145 (57%), Gaps = 1/145 (0%)
Frame = +3
Query: 90 FQIVDAYERRNADSHRVIGTLLGTS-DKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYX 266
F I D+Y RR + RVIGTLLG+ G V V N + VPH E DQV ++ Y ++Y
Sbjct: 27 FNICDSYVRRPDQAERVIGTLLGSVLPDGTVHVRNSYVVPHNESPDQVALDIEYHHNMYA 86
Query: 267 LNRRVNSSESIVGWWATGNEVTNHSSVIHXYYSRECREPVHVTLDTSLAGGRMGLRAYVC 446
+ +VN E IVGW++TG V+ S++IH +YSRE + P+H+T+DT G ++AY+
Sbjct: 87 SHHKVNPKEVIVGWFSTGFGVSGGSTLIHDFYSREVQSPIHLTVDTGFTRGDASIKAYIS 146
Query: 447 VPLGVPNGKQGCMFTPVXVTLTCYE 521
L + + F + + L E
Sbjct: 147 SNLSLGDRHLAAQFQEIPLDLRMLE 171
>04_03_0650 -
18411588-18411645,18412020-18412172,18412340-18412407,
18412499-18412600,18412695-18412766,18412843-18412891,
18412971-18413104,18413488-18413554,18414471-18414574,
18414677-18414793,18415538-18415647,18415763-18415772
Length = 347
Score = 48.0 bits (109), Expect = 5e-06
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +3
Query: 138 VIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAE-LNYAMDVYXLNRRVNSSESIVGWWA 314
V G LLG V+EVTNCF P +E ++ +A+ NY +++ R VN + VGW+
Sbjct: 57 VTGQLLGLDVGSVLEVTNCFPFPMREDDEEADADGANYQLEMMRCLREVNVDNNTVGWYQ 116
Query: 315 T---GNEVTNHSSVIHXYYSRECREPVHVTLDTSLAG-GRMGLRA 437
+ G+ T Y R V + D S + G + L+A
Sbjct: 117 SCLLGSFQTVELIETFMNYQENIRRCVCIVYDPSRSNQGVLALKA 161
>04_04_1468 +
33811471-33811657,33811888-33811980,33812899-33813027,
33813089-33813166,33813377-33813435,33813522-33813644,
33814225-33814282,33814383-33814468,33814564-33814635
Length = 294
Score = 46.4 bits (105), Expect = 1e-05
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +3
Query: 96 IVDAYERRNADSH-RVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVE---AELNYAMDVY 263
IVD Y R D+ RV+G LLGTS +G V+VTN + VP +E + NY ++
Sbjct: 27 IVDHYNRVARDTRKRVVGVLLGTSSRGSVDVTNSYAVPFEEDDKDPRIWFLDHNYHESMF 86
Query: 264 XLNRRVNS 287
+ +R+N+
Sbjct: 87 SMFKRINA 94
>08_02_1145 -
24674319-24674403,24674691-24674746,24674885-24674965,
24675063-24675137,24675418-24675479,24675857-24675950,
24676674-24676762,24676864-24677194
Length = 290
Score = 31.9 bits (69), Expect = 0.32
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +3
Query: 135 RVIGTLLGTSDKGVVEVTNCFCVPHKEHADQVEAELNYAM--DVYXLNRRVNSSESIVGW 308
RV G ++G VE+ N F + D V L+ A L ++V ++GW
Sbjct: 68 RVFGCVIGVQRGRTVEIFNSFELV----LDPVSGTLDRAFLEKKQELYKKVFPDFYVLGW 123
Query: 309 WATGNEVTNHSSVIHXYYSRECREPVHVTLDTSL 410
++TG++V + IH PV++ L+ ++
Sbjct: 124 YSTGSDVRDTDMQIHKALMDINESPVYLLLNPAI 157
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 30.7 bits (66), Expect = 0.75
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 38 ELKMALNISVKVHPACFISNCGRIR 112
E K I V+VHP F +NCG+IR
Sbjct: 39 EKKYEPTIGVEVHPLDFFTNCGKIR 63
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 38 ELKMALNISVKVHPACFISNCGRIR 112
E K I V+VHP F +NCG+IR
Sbjct: 39 EKKYEPTIGVEVHPLDFTTNCGKIR 63
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -2
Query: 147 CR*LCENLHFDVRMRPQFEIKQAGWTFTLILRAIFNSTXNYKPKKHRVP 1
C+ + E+LHF +RMR FE G+ L +F+S+ P P
Sbjct: 205 CKIIPEDLHFVLRMRHMFE--SLGYQSGFFLSQLFSSSRGTSPSPSSFP 251
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 341 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 237
G V + +AS+PP FR +++ Q+V I + +KF
Sbjct: 442 GSVNWKLASKPPIKLPFRKLENCNQVVKIGKELKF 476
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 341 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 237
G+V + AS+PP FR +++ Q++ I + +KF
Sbjct: 439 GIVNWKQASKPPIIMPFRKVENGNQVIEIGKELKF 473
>07_03_1709 -
28873172-28873327,28873519-28873584,28874067-28874127,
28875406-28875462,28876301-28876531,28876685-28876799,
28876897-28877136,28877222-28877316,28877406-28877585,
28877663-28877839,28877920-28878890
Length = 782
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 478 PCFPFGTPNGTQTYARKPIRPPASEVSRVTWTG 380
P PF +P + +AR P P +E+S TG
Sbjct: 599 PDSPFASPTKSAGFARDPFAPTEAEISATASTG 631
>11_01_0433 - 3323372-3324616,3324708-3324905
Length = 480
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 281 DSSVQLVNIHRVIKFRFDLIGMFFVWHAEAVG 186
D++V L+ IH+ I F F ++FVW +A+G
Sbjct: 321 DAAVVLMLIHQFITFGFACTPLYFVWE-KAIG 351
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 341 GVVGYFIASRPPTNNTFRGIDSSVQLVNIHRVIKF 237
G V + +A+RPP FR +++ Q++ I + +KF
Sbjct: 469 GSVNWKMANRPPIKLPFRKVENCNQVLKIGKELKF 503
>05_05_0039 -
21782093-21782320,21782383-21782754,21783031-21783496,
21784896-21784993,21785179-21785362,21785462-21785574,
21785942-21786127,21786191-21786364
Length = 606
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 281 DSSVQLVNIHRVIKFRFDLIGMFFVWHAEAVG 186
D++V L+ IH+ I F F ++FVW +A+G
Sbjct: 311 DAAVILMLIHQFITFGFACTPLYFVWE-KAIG 341
>01_05_0320 -
20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 157 ARATKEWWK*PTASACHTKN-MPIKSK 234
A +KEWW +ACH N +P+K K
Sbjct: 508 AGLSKEWWGEAVLTACHVLNKIPMKHK 534
>10_01_0267 -
2828966-2829340,2831164-2831629,2833390-2833487,
2833782-2834078,2834287-2834694
Length = 547
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 281 DSSVQLVNIHRVIKFRFDLIGMFFVW 204
D++V L+ IH+ I F F ++FVW
Sbjct: 327 DAAVVLMLIHQFITFGFACTPLYFVW 352
>03_02_0338 +
7614199-7614450,7614518-7614703,7614815-7614927,
7615023-7615206,7615343-7615440,7616113-7616578,
7617342-7617683
Length = 546
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 281 DSSVQLVNIHRVIKFRFDLIGMFFVW 204
D++V L+ IH+ I F F ++FVW
Sbjct: 337 DAAVVLMLIHQFITFGFACTPLYFVW 362
>01_06_1089 -
34451982-34452670,34452755-34452814,34453287-34453352,
34454055-34454253,34454470-34454719,34454830-34454898,
34455733-34455804,34456027-34456168,34456544-34457064,
34457166-34457739,34459164-34459269
Length = 915
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 364 PVNAVSLSMLLWTLRWLEVEWVYVHMFVYHWECQMESKVACSL 492
P VSL ++W + ++E W Y H + + +S+ SL
Sbjct: 630 PYQFVSLFSVIWLISYIENVWTYGHRYRELRSSKQDSRYDSSL 672
>01_01_0137 + 1249081-1249341,1249500-1250237
Length = 332
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = -2
Query: 465 LALPMVHKHMHVNPFDLQPAKCPE*HGQAHGIHGNNXRV*QRSGWLLHC 319
+A+ ++H H + P KC H G GN+ ++ +R+ HC
Sbjct: 67 IAVGLLHCHACLLPLKPPVFKCEAAHVVCSGCRGNHGQLCRRAAAYAHC 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,630,272
Number of Sequences: 37544
Number of extensions: 332230
Number of successful extensions: 829
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1154538620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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