BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_M03
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein. 105 1e-22
BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein. 105 1e-22
BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein. 105 1e-22
BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein. 105 1e-22
BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein. 105 1e-22
AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein. 105 1e-22
AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein. 102 1e-21
BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open read... 100 9e-21
AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein. 98 2e-20
AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein pr... 69 1e-11
BC104634-1|AAI04635.1| 177|Homo sapiens NXN protein protein. 31 4.7
BC073845-1|AAH73845.1| 265|Homo sapiens NXN protein protein. 31 4.7
BC009327-1|AAH09327.2| 326|Homo sapiens NXN protein protein. 31 4.7
>BT007132-1|AAP35796.1| 210|Homo sapiens neighbor of COX4 protein.
Length = 210
Score = 105 bits (253), Expect = 1e-22
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 376
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 377 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYF 556
FH + ++PM EVALT I++ + + VIAGYY A E +D + +A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGF 119
Query: 557 PSAVFIVVDNKKMVQHLXSPAIKVHKYSDGK 649
I+VDN K +P I V+++ + +
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENR 150
>BC020250-1|AAH20250.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 105 bits (253), Expect = 1e-22
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 376
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 377 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYF 556
FH + ++PM EVALT I++ + + VIAGYY A E +D + +A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGF 119
Query: 557 PSAVFIVVDNKKMVQHLXSPAIKVHKYSDGK 649
I+VDN K +P I V+++ + +
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENR 150
>BC007445-1|AAH07445.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 105 bits (253), Expect = 1e-22
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 376
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 377 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYF 556
FH + ++PM EVALT I++ + + VIAGYY A E +D + +A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGF 119
Query: 557 PSAVFIVVDNKKMVQHLXSPAIKVHKYSDGK 649
I+VDN K +P I V+++ + +
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENR 150
>BC005886-1|AAH05886.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 105 bits (253), Expect = 1e-22
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 376
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 377 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYF 556
FH + ++PM EVALT I++ + + VIAGYY A E +D + +A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGF 119
Query: 557 PSAVFIVVDNKKMVQHLXSPAIKVHKYSDGK 649
I+VDN K +P I V+++ + +
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENR 150
>BC001472-1|AAH01472.1| 210|Homo sapiens COX4 neighbor protein.
Length = 210
Score = 105 bits (253), Expect = 1e-22
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 376
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 377 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYF 556
FH + ++PM EVALT I++ + + VIAGYY A E +D + +A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGF 119
Query: 557 PSAVFIVVDNKKMVQHLXSPAIKVHKYSDGK 649
I+VDN K +P I V+++ + +
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENR 150
>AF005888-1|AAB94489.1| 210|Homo sapiens COX4AL protein.
Length = 210
Score = 105 bits (253), Expect = 1e-22
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 376
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 377 FHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYF 556
FH + ++PM EVALT I++ + + VIAGYY A E +D + +A +I E F
Sbjct: 61 FHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAE-KVASRIAEGF 119
Query: 557 PSAVFIVVDNKKMVQHLXSPAIKVHKYSDGK 649
I+VDN K +P I V+++ + +
Sbjct: 120 SDTALIMVDNTKFTMDCVAPTIHVYEHHENR 150
>AY368908-1|AAQ83690.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 102 bits (244), Expect = 1e-21
Identities = 59/138 (42%), Positives = 77/138 (55%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 394
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ EG L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGEG-----LCLTDCVPLFHSHLA 55
Query: 395 VSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYFPSAVFI 574
+S M EVAL Q++ V+AGYY A D L IA +I E+FP AV I
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPL-ALKIAGRIAEFFPDAVLI 114
Query: 575 VVDNKKMVQHLXSPAIKV 628
++DN+K+V P + V
Sbjct: 115 MLDNQKLVPQPRVPPVIV 132
>BC002491-1|AAH02491.1| 208|Homo sapiens chromosome 14 open reading
frame 122 protein.
Length = 208
Score = 99.5 bits (237), Expect = 9e-21
Identities = 58/138 (42%), Positives = 76/138 (55%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 394
M EV I AY K+ LHAA+YPH AVNG+ LA A ++ E L + D +PLFH
Sbjct: 1 MGEVEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGE-----CLCLTDCVPLFHSHLA 55
Query: 395 VSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYFPSAVFI 574
+S M EVAL Q++ V+AGYY A D L IA +I E+FP AV I
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPL-ALKIAGRIAEFFPDAVLI 114
Query: 575 VVDNKKMVQHLXSPAIKV 628
++DN+K+V P + V
Sbjct: 115 MLDNQKLVPQPRVPPVIV 132
>AF151870-1|AAD34107.1| 208|Homo sapiens CGI-112 protein protein.
Length = 208
Score = 98.3 bits (234), Expect = 2e-20
Identities = 57/138 (41%), Positives = 74/138 (53%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKEGGRNQSLDIVDAIPLFHHSHY 394
M EV I Y K+ LHAA+YPH AVNG+ LA A G + L + D +PLFH
Sbjct: 1 MGEVEISGPGYVKMCLHAARYPHAAVNGLFLAPA-----TGSGECLCLTDCVPLFHSHLA 55
Query: 395 VSPMAEVALTQIETIAQSENCVIAGYYAACENFRDNIVERCPXLXIAEKIVEYFPSAVFI 574
+S M EVAL Q++ V+AGYY A D L IA +I E+FP AV I
Sbjct: 56 LSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPL-ALKIAGRIAEFFPDAVLI 114
Query: 575 VVDNKKMVQHLXSPAIKV 628
++DN+K+V P + V
Sbjct: 115 MLDNQKLVPQPRVPPVIV 132
>AF005889-1|AAB94820.1| 77|Homo sapiens hypothetical protein
protein.
Length = 77
Score = 69.3 bits (162), Expect = 1e-11
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 215 MSEVSIETGAYAKIILHAAKYPHCAVNGVLLADAGKTKE-----GGRNQSLDI-VDAIPL 376
M V + T AY K++LH AKYPHCAVNG+L+A+ K ++ GG + VD IPL
Sbjct: 1 MPGVKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPL 60
Query: 377 FHHSHYVSPMAEVALT 424
FH + ++PM EVALT
Sbjct: 61 FHGTLALAPMLEVALT 76
>BC104634-1|AAI04635.1| 177|Homo sapiens NXN protein protein.
Length = 177
Score = 30.7 bits (66), Expect = 4.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 191 PLLSNNHKMSEVSIETGAYAKIILHAAKYPHC-AVNGVLLADAGKTKEGGRNQSLDIVDA 367
PLL NN + E S G++ + A P C ++ VL+ K KE G+N + V A
Sbjct: 64 PLLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSA 123
>BC073845-1|AAH73845.1| 265|Homo sapiens NXN protein protein.
Length = 265
Score = 30.7 bits (66), Expect = 4.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 191 PLLSNNHKMSEVSIETGAYAKIILHAAKYPHC-AVNGVLLADAGKTKEGGRNQSLDIVDA 367
PLL NN + E S G++ + A P C ++ VL+ K KE G+N + V A
Sbjct: 7 PLLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSA 66
>BC009327-1|AAH09327.2| 326|Homo sapiens NXN protein protein.
Length = 326
Score = 30.7 bits (66), Expect = 4.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 191 PLLSNNHKMSEVSIETGAYAKIILHAAKYPHC-AVNGVLLADAGKTKEGGRNQSLDIVDA 367
PLL NN + E S G++ + A P C ++ VL+ K KE G+N + V A
Sbjct: 68 PLLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQNFEIIFVSA 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,445,847
Number of Sequences: 237096
Number of extensions: 1565633
Number of successful extensions: 6223
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6210
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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