Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_M03
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   1.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.9  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   4.4  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   4.4  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 210 WLLLSKGCKYY*LNQVQSIIY 148
           WL +  GC YY    +  I+Y
Sbjct: 308 WLYILSGCLYYFSTTINPILY 328



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 295 IHSTVWILSGVQYYFS 248
           ++  ++ILSG  YYFS
Sbjct: 305 LNEWLYILSGCLYYFS 320


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = +2

Query: 371 PLFHHSHYVSPMAEVALTQIETIAQSENCVIAGYYAACENF 493
           P  HH H    +  +   Q  T+++S +  +   YA+   F
Sbjct: 350 PHHHHHHQTQSLQHLHYRQPPTLSESYSSYVNSMYASGAQF 390


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = +2

Query: 488 NFRDNIVERCPXLXIAEKIVEYFPSAVFIVVD 583
           NF++NIV+    + + E +++   +   ++ D
Sbjct: 78  NFKENIVQELTSIYLDENVIKKLVAECSVISD 109


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = +2

Query: 488 NFRDNIVERCPXLXIAEKIVEYFPSAVFIVVD 583
           NF++NIV+    + + E +++   +   ++ D
Sbjct: 78  NFKENIVQELTSIYLDENVIKKLVAECSVISD 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,343
Number of Sequences: 438
Number of extensions: 3356
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)