Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_L24
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089613-1|AAL90351.1|  798|Drosophila melanogaster RE28061p pro...    44   1e-04
AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA ...    44   1e-04
Y00308-1|CAA68409.1| 1335|Drosophila melanogaster xanthine dehyd...    28   9.6  

>AY089613-1|AAL90351.1|  798|Drosophila melanogaster RE28061p
           protein.
          Length = 798

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 14/52 (26%)
 Frame = +2

Query: 131 MSNVTNQNGTGLEQQLAGLDLQ--------PQAPKST------GRYIPPHLR 244
           MSN  NQNGTGLEQQ+AGLDL         P   K++      G Y+PPHLR
Sbjct: 1   MSNAINQNGTGLEQQVAGLDLNGGSADYSGPITSKTSTNSVTGGVYVPPHLR 52


>AE014297-778|AAF54262.1|  798|Drosophila melanogaster CG9748-PA
           protein.
          Length = 798

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 14/52 (26%)
 Frame = +2

Query: 131 MSNVTNQNGTGLEQQLAGLDLQ--------PQAPKST------GRYIPPHLR 244
           MSN  NQNGTGLEQQ+AGLDL         P   K++      G Y+PPHLR
Sbjct: 1   MSNAINQNGTGLEQQVAGLDLNGGSADYSGPITSKTSTNSVTGGVYVPPHLR 52


>Y00308-1|CAA68409.1| 1335|Drosophila melanogaster xanthine
           dehydrogenase protein.
          Length = 1335

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 335 MNGCPVTH*DGCXSLSA*TLPLDQRLPATAYADAGVCS 222
           M+GC VT  +G  S      P+ +RLP    +  G C+
Sbjct: 80  MHGCAVTTVEGIGSTKTRLHPVQERLPKAHGSQCGFCT 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,014,103
Number of Sequences: 53049
Number of extensions: 452843
Number of successful extensions: 1225
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)