Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L11
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 1.9
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 28 3.4
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 27 4.4
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 27 4.4
Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical pr... 27 5.9
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 27 5.9
AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia t... 27 5.9
U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily ass... 27 7.8
U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily ass... 27 7.8
U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily ass... 27 7.8
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 27 7.8
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 27 7.8
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 27 7.8
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 27 7.8
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 27 7.8
AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.21
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 119 PKEDNSLNTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 286
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 125 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 295
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 125 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 295
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 122 KEDNSLNTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 247
K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 45 KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 122 KEDNSLNTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 247
K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 45 KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 152 ESAKKTIEELREKVESALAPETVK 223
E+ K+ IEE+REK++S A +T K
Sbjct: 478 ENRKEGIEEIREKIDSLSAEKTSK 501
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 110 RDAPKEDNSLNTLAESAKKTIEELREKVESAL 205
R+ K+DN L+ A +KT+EE+ E + +A+
Sbjct: 614 REILKKDNLLDENAPEEQKTVEEIAEHLNNAV 645
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 110 RDAPKEDNSLNTLAESAKKTIEELREKVESAL 205
R+ K+DN L+ A +KT+EE+ E + +A+
Sbjct: 614 REILKKDNLLDENAPEEQKTVEEIAEHLNNAV 645
>Z92847-3|CAB07422.2| 323|Caenorhabditis elegans Hypothetical
protein H01G02.2 protein.
Length = 323
Score = 27.1 bits (57), Expect = 5.9
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 119 PKEDNSLN--TLAESAKKTIE--ELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 286
P EDN N T+ ++ K E E R L + + NF + S +F+K LK +E
Sbjct: 224 PNEDNWPNWRTMPDANKLLFEPKEPRNNWTEILLCKEISNNFTEFLGSHLQFFKRLKASE 283
Query: 287 APK 295
K
Sbjct: 284 LLK 286
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 146 LAESAKKTIEELREKVESALAPE 214
L E A K +EE ++K++SA APE
Sbjct: 436 LEEHAVKKLEEEKDKLQSAAAPE 458
>AC024793-1|AAF60692.2| 649|Caenorhabditis elegans Atm (ataxia
telangectasia mutated)family protein 1 protein.
Length = 649
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 95 HAFVKRDAPKEDNSLNTLAESA 160
H F K D K DNSLN+ A A
Sbjct: 78 HQFEKNDLEKVDNSLNSAARKA 99
>U23168-4|AAU87833.1| 1379|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform d protein.
Length = 1379
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 113 DAPKEDNSLNTLAESAKKTIEELREKVESALA 208
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-3|AAU87831.1| 4034|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform b protein.
Length = 4034
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 113 DAPKEDNSLNTLAESAKKTIEELREKVESALA 208
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-2|AAC38806.2| 1633|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform a protein.
Length = 1633
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 113 DAPKEDNSLNTLAESAKKTIEELREKVESALA 208
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily
assigned gene nameprotein 308, isoform c protein.
Length = 7548
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 113 DAPKEDNSLNTLAESAKKTIEELREKVESALA 208
D P N + LAE +KK + +LRE ES A
Sbjct: 696 DVPDFVNKKDYLAEVSKKLLSDLREDSESVSA 727
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 140 NTLAESAKKTIEELREKVESALAPETVKKN 229
N E K+T+E LREKV+ A +++N
Sbjct: 285 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 314
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 140 NTLAESAKKTIEELREKVESALAPETVKKN 229
N E K+T+E LREKV+ A +++N
Sbjct: 302 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 331
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 140 NTLAESAKKTIEELREKVESALAPETVKKN 229
N E K+T+E LREKV+ A +++N
Sbjct: 302 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 331
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 140 NTLAESAKKTIEELREKVESALAPETVKKN 229
N E K+T+E LREKV+ A +++N
Sbjct: 285 NNSKEELKQTLEMLREKVQEAKRQNEMQEN 314
>AF022985-3|AAB69970.1| 355|Caenorhabditis elegans Hypothetical
protein T15B7.11 protein.
Length = 355
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 334 GLCT*ILKNYXSGFRCF--RGLQIFIKFVEAVYHRAKVFL 221
GL ++NY + F LQ+F+ ++ V+H + +FL
Sbjct: 92 GLMQLFIRNYSDQYMLFITAYLQLFVDYLAVVFHASSLFL 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,280,698
Number of Sequences: 27780
Number of extensions: 155214
Number of successful extensions: 478
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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