Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L10
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 38 0.009
03_02_0485 - 8808139-8808618 36 0.021
03_02_0484 + 8805053-8805538 36 0.021
03_02_0483 - 8804021-8804485 36 0.021
03_02_0478 + 8775892-8776377 35 0.049
02_02_0077 - 6586638-6587165 35 0.065
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 34 0.085
01_01_0229 - 1943473-1943922 34 0.11
01_01_0231 + 1951047-1951499 33 0.15
01_01_0227 + 1933247-1933699 32 0.34
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.60
09_04_0139 + 15030753-15031208,15031298-15031523,15031599-150319... 30 1.4
07_01_1127 + 10456895-10457388,10457488-10458112 29 3.2
04_01_0252 - 3329712-3331061 29 4.2
01_01_0670 - 5131007-5131873 28 5.6
03_02_1023 + 13265179-13265330,13265526-13265637,13265752-132660... 27 9.8
01_01_0900 + 7091970-7092068,7092175-7093131,7093210-7093968,709... 27 9.8
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 37.5 bits (83), Expect = 0.009
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Frame = +1
Query: 238 PWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEXKDQ-- 411
P R LA + + D + ++ D+ + EE+ V D +V+ G+H + + +
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 412 ----HGYISRQ----FTRRYALPEGCTAESVESRLSSDGVLSVIAPRKVPPAVEGERKIP 567
G+ + + R ALP+ C V + L +GVL V P+ E ERK+
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPK-----TEVERKVI 235
Query: 568 IAQTGPVRKEVKDQSNGD 621
Q ++K V + + +
Sbjct: 236 DVQIKYLKKLVMENCSDE 253
>03_02_0485 - 8808139-8808618
Length = 159
Score = 36.3 bits (80), Expect = 0.021
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Frame = +1
Query: 319 DVQHFAPEEISVKTADGYIV-VEGKHX----EXKDQHGYISR---QFTRRYALPEGCTAE 474
DV EE+ V+ DG I+ + G+ E D+ + R +F RR+ LPE E
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 475 SVESRLSSDGVLSVIAPRKVP 537
+++ + +GVL+V P++ P
Sbjct: 128 QIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +1
Query: 319 DVQHFAPEEISVKTADGYIV-VEG---KHXEXK-DQHGYISR---QFTRRYALPEGCTAE 474
DV EE+ V+ DG ++ + G K E K D+ + R +F RR+ LPE E
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 475 SVESRLSSDGVLSVIAPRKVP 537
+++ + +GVL+V P++ P
Sbjct: 130 QIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Frame = +1
Query: 319 DVQHFAPEEISVKTADGYIV-VEG---KHXEXK-DQHGYISR---QFTRRYALPEGCTAE 474
DV EE+ V+ DG ++ + G K E K D+ + R +F RR+ LPE E
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 475 SVESRLSSDGVLSVIAPRKVP 537
+++ + +GVL+V P++ P
Sbjct: 123 QIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 35.1 bits (77), Expect = 0.049
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Frame = +1
Query: 319 DVQHFAPEEISVKTADGYIV-VEG---KHXEXK-DQHGYISR---QFTRRYALPEGCTAE 474
DV EE+ V+ DG I+ + G K E K DQ + R +F RR+ LP+ E
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 475 SVESRLSSDGVLSVIAPRK 531
+++ + +GVL+V P++
Sbjct: 130 QIKASM-ENGVLTVTVPKE 147
>02_02_0077 - 6586638-6587165
Length = 175
Score = 34.7 bits (76), Expect = 0.065
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 13/134 (9%)
Frame = +1
Query: 220 SREYYRPWRHLAAAARDLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIV-VEGKHX 396
+R Y R R +A D+ S + +D+ AP ++ V+ DG ++ + G+
Sbjct: 36 TRAYVRDRRAMANTPMDVKELRASGA--LVLAVDMPGVAPADVRVEVEDGNVLAISGERR 93
Query: 397 EXK---DQHG----YISRQ-----FTRRYALPEGCTAESVESRLSSDGVLSVIAPRKVPP 540
D G Y+ + F RR+ LPE + V + DGVL+V +K PP
Sbjct: 94 RPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPP 152
Query: 541 AVEGERKIPIAQTG 582
+ R + + G
Sbjct: 153 EPKKPRVVEVKVAG 166
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 34.3 bits (75), Expect = 0.085
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +1
Query: 319 DVQHFAPEEISVKTADGYIVV----EGKHXEXKDQHGY----ISRQFTRRYALPEGCTAE 474
D+ EE+ V+ +G ++V K E K+ + S QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 475 SVESRLSSDGVLSVIAPR 528
V++ L +GVL+V P+
Sbjct: 119 QVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +1
Query: 319 DVQHFAPEEISVKTADGYIVV----EGKHXEXKDQHGY----ISRQFTRRYALPEGCTAE 474
D+ EE+ V+ +G ++V K E K+ + S QF RR+ LPE +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 475 SVESRLSSDGVLSVIAPR 528
V++ + +GVL+V P+
Sbjct: 118 QVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 33.5 bits (73), Expect = 0.15
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +1
Query: 319 DVQHFAPEEISVKTADGYIVV----EGKHXEXKDQHGY----ISRQFTRRYALPEGCTAE 474
D+ EE+ V+ +G ++V K E K+ + S QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 475 SVESRLSSDGVLSVIAPR 528
V++ + +GVL+V P+
Sbjct: 119 QVKAGM-ENGVLTVTVPK 135
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 379 VEGKHXEXKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAPRK 531
V+GK+ E S +F RR+ LP G + V + + +GVL+V P++
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 394 RVCLQPRCSRPPF*QRFLPGRNAGR 320
R CLQPR SRPP ++F GR+ R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245
>09_04_0139 +
15030753-15031208,15031298-15031523,15031599-15031981,
15032353-15032685,15032902-15033010,15033089-15033465
Length = 627
Score = 30.3 bits (65), Expect = 1.4
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 2/141 (1%)
Frame = +1
Query: 112 GYLITKLSVLXRLMDQHFGLGLTPEDFLSAAAGPLVSREYYRPWRHLAAAARDLG--SSI 285
G+ L + ++ HF + LT + + + R W+ + DL S+
Sbjct: 396 GFKQVHLKACAKALNDHFNINLTSDQITN----------HIRTWKRKYSKIADLRKLSAA 445
Query: 286 KSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHXEXKDQHGYISRQFTRRYALPEGC 465
SD D F ++LD +H+A + I AD + + H K + + T +YA
Sbjct: 446 LSDDDNFIISLDHKHYA-DHIKDHKADAEYLNKPIHNYSKMLVIFGNSLATGKYAKGSAT 504
Query: 466 TAESVESRLSSDGVLSVIAPR 528
+ S L+ + S AP+
Sbjct: 505 GSASRVHALNEENGASSSAPK 525
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -3
Query: 394 RVCLQPRCSRPPF*QRFLPGRNAGR 320
R CLQPR SRPP ++F R+ R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 394 RVCLQPRCSRPPF*QRFLPGRNAGR 320
R CLQPR +RPP ++F R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430
>01_01_0670 - 5131007-5131873
Length = 288
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 108 PWLFDYEIERPRSPHGSTFRLGADSGRFSQCC 203
P ++ I RP++P R G S RFS CC
Sbjct: 27 PKMYQRPIYRPQAPAAKRRRGGRSSCRFSCCC 58
>03_02_1023 +
13265179-13265330,13265526-13265637,13265752-13266048,
13266361-13266623,13267637-13267847,13268420-13268590,
13268671-13268748,13269275-13269520,13269763-13271868,
13272122-13273904,13274113-13274216,13274752-13275108,
13275210-13275328,13276175-13276436,13276669-13276893,
13277075-13277214,13278087-13278159,13278431-13278532,
13278647-13279018,13279183-13279230,13279516-13279900,
13280440-13280558
Length = 2574
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 490 LSSDGVLSVIAPRKVPPAVEGERKIPIAQTGPVRKEVKDQSNGDKA*VVSS 642
L DG SV+ KV V IPI T P+R E + +G + ++ S
Sbjct: 403 LLMDGATSVLEVVKVATVVSAN--IPIQSTSPIRAEAGIKISGSQCNIIIS 451
>01_01_0900 +
7091970-7092068,7092175-7093131,7093210-7093968,
7094322-7094366
Length = 619
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = +2
Query: 461 AVRLNLWSPGCLQMVCCL*SHPGRCRQQWRVNARFRSPKPDP 586
AVR NL + L C GR + WRV AR R+ DP
Sbjct: 220 AVRPNLTTYNILVKAWC---DAGRLEEAWRVVARMRASGADP 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,732,563
Number of Sequences: 37544
Number of extensions: 456048
Number of successful extensions: 1390
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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