Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_L09
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    30   3.1  
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    30   3.1  

>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p
           protein.
          Length = 1394

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +1

Query: 25  ARVSVSNDVRLSPAEPLVKVTLKWSLNSISLGREKKL*TTEYLPTLLKCDPATGEWSNIK 204
           AR   SN       +P +K   +  L +I L +  +L        + +CDP  G+W+ ++
Sbjct: 698 ARRCCSNGCGTQCVDPQLKTACQ-HLQAIQLHQSSELGIPARQMAVAQCDPNNGKWNQVQ 756

Query: 205 C 207
           C
Sbjct: 757 C 757



 Score = 29.5 bits (63), Expect = 4.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 166  KCDPATGEWSNIKCI 210
            +CDP TG WS ++C+
Sbjct: 997  RCDPVTGHWSPVQCL 1011


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
           protein.
          Length = 1511

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +1

Query: 25  ARVSVSNDVRLSPAEPLVKVTLKWSLNSISLGREKKL*TTEYLPTLLKCDPATGEWSNIK 204
           AR   SN       +P +K   +  L +I L +  +L        + +CDP  G+W+ ++
Sbjct: 815 ARRCCSNGCGTQCVDPQLKTACQ-HLQAIQLHQSSELGIPARQMAVAQCDPNNGKWNQVQ 873

Query: 205 C 207
           C
Sbjct: 874 C 874



 Score = 29.5 bits (63), Expect = 4.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 166  KCDPATGEWSNIKCI 210
            +CDP TG WS ++C+
Sbjct: 1114 RCDPVTGHWSPVQCL 1128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,484,312
Number of Sequences: 53049
Number of extensions: 398735
Number of successful extensions: 587
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)