Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_L07
         (539 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   2.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.6  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   6.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   6.1  

>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/35 (20%), Positives = 20/35 (57%)
 Frame = -3

Query: 519 IVISCKFCVTLSLEVVLDAXLERNEP*AVCSTDTG 415
           IV+   FC+ ++   + +  ++ ++   +C T++G
Sbjct: 4   IVVIFAFCICVNAMTIEELKIQLHDVQEICKTESG 38


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 422  SVLHTAQGSFRSSXASKTTSRLSVTQNLHEITIK 523
            SVLH+AQ    SS ++ T    ++T  L  + ++
Sbjct: 940  SVLHSAQSVVASSASNVTNVTTNLTTILPPVKVQ 973


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 519 IVISCKFCVTLSLEVVLDAXLERNEP*AVCSTDTG 415
           IV+   FCV +    + +     +   +VC T+TG
Sbjct: 4   IVLIFGFCVCVGALTIEELKTRLHTEQSVCKTETG 38


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 399 CKAR*TRYRCYTQLKVHS 452
           CKA    + C  QLKVH+
Sbjct: 206 CKACGKGFTCSKQLKVHT 223


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,118
Number of Sequences: 438
Number of extensions: 2186
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)