Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_L06
         (554 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.33 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.33 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   3.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   3.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.5  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -3

Query: 282 TLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHVAWR 124
           TLV  H+  +++        S+   VW +L+   +  D Y V N V F   ++
Sbjct: 219 TLVQMHSNLVTTSEEVCDSFSIFGLVWISLIFVVLIGDAYAVLNSVLFQNVYK 271


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -3

Query: 282 TLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHVAWR 124
           TLV  H+  +++        S+   VW +L+   +  D Y V N V F   ++
Sbjct: 219 TLVQMHSNLVTTSEEVCDSFSIFGLVWISLIFVVLIGDAYAVLNSVLFQNVYK 271


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 202 PHKVYHGKTGR 234
           PH  Y GKTGR
Sbjct: 302 PHPTYFGKTGR 312


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 27  NTRLEDDELQGLPAAAPXHLFARRFRTHGTIPLSTLHESVQ 149
           N R +  +  G        L A+    H TIPL+   E +Q
Sbjct: 278 NKRAKIKKASGTKNPLALQLMAQGLYNHSTIPLTKEEEELQ 318


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 540 IFYWTLRYEFVWDR 499
           ++YW  +YE  W R
Sbjct: 119 VYYWRQQYEDFWHR 132


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = -3

Query: 279 LVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDVYNVSNFVHFHVA 130
           LV+ H   +     H +  S+   +W T+    +  D Y V     FH++
Sbjct: 233 LVNLHKNLVKVAKDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHLS 282


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 437 SQLPLKLPTSSVELRNPSY 493
           S  P  LPT      NP+Y
Sbjct: 78  SSTPSSLPTQRTSTSNPTY 96


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/44 (25%), Positives = 14/44 (31%)
 Frame = +3

Query: 138 ESVQSWRHCXHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCD 269
           E + SWR     +      G      P    S V    +C  CD
Sbjct: 511 EQIISWRSSDDAKGGGGGSGSGNNQPPGGPSSHVSAVLTCKVCD 554


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 248 VTLYTRPVFPWYTLCGIP 195
           V L    +  WYT+C +P
Sbjct: 9   VNLGLNGLIDWYTVCLVP 26


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 393 EGSQGCRQDRQPEETASSP 449
           +G  G  Q   PE ++S+P
Sbjct: 413 DGGSGQNQPESPESSSSTP 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,082
Number of Sequences: 336
Number of extensions: 2313
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)