Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L06
(554 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0310 - 16669565-16669822,16670558-16670794 138 2e-33
03_01_0290 + 2246791-2247027,2248089-2248346 138 2e-33
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 31 0.62
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 30 1.4
08_01_0283 - 2304024-2304111,2304224-2304343,2304594-2304715,230... 29 1.9
01_01_0167 + 1422344-1424260,1424338-1424472,1424568-1424990,142... 29 1.9
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 29 3.3
05_03_0549 - 15349259-15349346,15349466-15349585,15349899-153500... 29 3.3
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 29 3.3
09_02_0307 + 7131031-7131326,7131414-7131560,7132579-7132711,713... 28 4.4
03_05_0435 - 24259864-24260206,24260302-24260467,24261175-242612... 28 4.4
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694... 28 4.4
02_01_0391 + 2838471-2838794,2838892-2839028,2841155-2841631,284... 28 4.4
01_06_1794 - 39919363-39920025 28 4.4
01_01_0990 + 7847066-7847478,7847713-7848679 28 4.4
03_06_0467 + 34145126-34145187,34145403-34145759,34146161-341462... 28 5.8
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549... 28 5.8
01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999 28 5.8
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 28 5.8
07_01_0174 - 1227871-1228043,1228303-1228423,1228519-1228588,122... 27 7.6
02_01_0030 - 183836-183903,183986-184453,184526-184604,184698-18... 27 7.6
>10_08_0310 - 16669565-16669822,16670558-16670794
Length = 164
Score = 138 bits (335), Expect = 2e-33
Identities = 64/129 (49%), Positives = 89/129 (68%)
Frame = +1
Query: 133 YMKVYKVGDIVXIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRI 312
Y++ YK+G+ V ++ NGAV KGMPHK YHG+TGRV+NVT A+GV +NK+V RII KRI
Sbjct: 30 YLRTYKIGEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRI 89
Query: 313 NIRVEHVKHSKCXQDFLXXVKXNXRLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVL 492
++RVEHV+ S+C ++F N +L +AKA G+ ++ KRQP PK +V G
Sbjct: 90 HVRVEHVQPSRCTEEFRLRKIKNDQLKADAKARGEVISTKRQPQGPKPGFMVEGATLET- 148
Query: 493 LAPIPYEFV 519
+ PIPY+ V
Sbjct: 149 VTPIPYDVV 157
>03_01_0290 + 2246791-2247027,2248089-2248346
Length = 164
Score = 138 bits (335), Expect = 2e-33
Identities = 64/129 (49%), Positives = 88/129 (68%)
Frame = +1
Query: 133 YMKVYKVGDIVXIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRI 312
Y++ YK+GD V ++ NGAV KGMPHK YHG+TGRV+NVT A+GV +NK+V RII KRI
Sbjct: 30 YLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRI 89
Query: 313 NIRVEHVKHSKCXQDFLXXVKXNXRLLKEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVL 492
++RVEHV+ S+C ++ N +L +AKA G+ ++ KRQP PK +V G
Sbjct: 90 HVRVEHVQPSRCTEELRLRKIKNDQLKADAKARGEVISTKRQPEGPKPGFMVEGATLET- 148
Query: 493 LAPIPYEFV 519
+ PIPY+ V
Sbjct: 149 VTPIPYDVV 157
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 31.1 bits (67), Expect = 0.62
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 171 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC*ACQ 335
+++W C SK YA QS WK S++ C RCDC SR+D H+ C A
Sbjct: 117 EKKWKCDKCSKRYAVQS-DWKAHSKI---CGTREYRCDCGTLFSRRDSFITHRAFCDA-- 170
Query: 336 ALQVXTRLP 362
Q +RLP
Sbjct: 171 LAQESSRLP 179
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 171 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 323
+++W C SK YA QS WK +++ C RCDC SRKD H+ C
Sbjct: 139 EKKWKCDRCSKKYAVQS-DWKAHTKI---CGTKEYRCDCGTIFSRKDSFITHRAFC 190
>08_01_0283 -
2304024-2304111,2304224-2304343,2304594-2304715,
2304824-2305096,2305454-2305558,2305635-2305851,
2306012-2306262,2306518-2306724,2307087-2307351,
2308655-2308749
Length = 580
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 153 WRHCXHQRQWCSSKGYATQSIPWKDRSRVQRDCS 254
W H QW YAT+ I W+ R+ V D S
Sbjct: 535 WISIGHSTQWLWYSVYATKQISWRTRALVISDWS 568
>01_01_0167 +
1422344-1424260,1424338-1424472,1424568-1424990,
1425183-1425252,1425356-1425495,1425620-1425679,
1425776-1425931,1426272-1426541
Length = 1056
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 145 YKVGDIVXIRGNGAVQKGMPHKVY 216
++ GDI+ I G+G+V K PH++Y
Sbjct: 623 FEDGDIIVIWGDGSVSKVGPHEIY 646
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +3
Query: 171 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC*ACQ 335
+++W C SK YA QS WK S+ C RCDC SR+D H+ C A
Sbjct: 121 EKKWRCDKCSKRYAVQS-DWKAHSKT---CGTREYRCDCGTLFSRRDSFITHRAFCDA-- 174
Query: 336 ALQVXTRLP 362
Q R+P
Sbjct: 175 LAQENARMP 183
>05_03_0549 -
15349259-15349346,15349466-15349585,15349899-15350020,
15350511-15350783,15351398-15351502,15351588-15351804,
15352031-15352281,15352582-15352776,15352881-15353139,
15354617-15354714
Length = 575
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 153 WRHCXHQRQWCSSKGYATQSIPWKDRSRVQRD 248
W H H QW YA++ W+ R V D
Sbjct: 530 WIHVGHSTQWLWYSVYASKQFSWRTRMLVVSD 561
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 161 MSPTLYTFM*RGERNSSMCAEPASEQVXWCR 69
++P LY M RG S C ++ WCR
Sbjct: 60 LTPPLYQCMRRGHITCSTCVAEMGQECQWCR 90
>09_02_0307 +
7131031-7131326,7131414-7131560,7132579-7132711,
7133115-7133207,7133421-7133717
Length = 321
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 394 KEAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 522
++A AA + L+ + A G E+P L P+PYE+ A
Sbjct: 77 RKAAAAAEADALRSAARQARTASSWYGDERPRWLGPVPYEYPA 119
>03_05_0435 -
24259864-24260206,24260302-24260467,24261175-24261241,
24261553-24261648,24261718-24261898,24262252-24262323,
24262393-24262505,24262596-24262817,24263262-24263910,
24264118-24264206,24265932-24266015,24266219-24266358,
24266522-24266573
Length = 757
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 186 SSKGYATQSIPWKDRSRVQRDC--SCSRCDCQQACSRKDYTE 305
+S G + Q P + R + Q D SC RC C+++ K Y E
Sbjct: 436 TSAGNSGQENPKRKRQKCQNDNVDSCKRCSCKKSKCLKLYCE 477
>03_02_0263 -
6948618-6948818,6948909-6948971,6949078-6949146,
6949232-6949297,6949380-6949526,6949608-6949702,
6949845-6950016,6952187-6952318,6953581-6953674,
6954067-6954184,6955884-6957057
Length = 776
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 240 QRDCSCSRCDCQQACSRKDYTEAHQYPC 323
Q C C C C + RKD A +Y C
Sbjct: 391 QDTCGCMMCKCIYSDQRKDIVLADKYTC 418
>02_01_0391 +
2838471-2838794,2838892-2839028,2841155-2841631,
2841719-2841999,2843009-2843051,2844094-2844148,
2845771-2845824,2846282-2846314,2846574-2846621,
2846885-2846950,2847286-2847426
Length = 552
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 342 GVLDMLNTDIDAL-RYNPSANTLVDNHTESMSSHVVHATCLSMVYFVWHTLLNCTIASDV 166
GV+++ ++ +A RYN +A+ L + TES+ S + C++ + + + T
Sbjct: 239 GVIEIPYSEEEACCRYNETASILKELITESVGSEAIGVDCIADFRRLLRQMESMTSVCQE 298
Query: 165 YNVSN 151
Y +SN
Sbjct: 299 YIISN 303
>01_06_1794 - 39919363-39920025
Length = 220
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +1
Query: 397 EAKAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPI 504
EA AAG + KRQP PP SG A +
Sbjct: 37 EAAAAGDKTSAKRQPPPPSRLKKTSGRNDDAATAAV 72
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 171 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 323
+++W C SK YA QS WK S+ C RCDC SR+D H+ C
Sbjct: 98 EKKWKCDKCSKRYAVQS-DWKAHSKT---CGTREYRCDCGTLFSRRDSFITHRAFC 149
>03_06_0467 +
34145126-34145187,34145403-34145759,34146161-34146248,
34146361-34146506,34146892-34146936,34147030-34147133,
34147225-34147361,34147651-34147761,34148455-34148664
Length = 419
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 401 PRLPARPST*RDSQLPLKLPTSSVELRNPSYLRLSH 508
P L RP R P+ PT + +++ PS+L L H
Sbjct: 347 PNLQERPMDRRPELGPMPFPTQAWQMQAPSHLPLLH 382
>02_05_0157 -
26353971-26354336,26354645-26354726,26354838-26354933,
26355365-26356068
Length = 415
Score = 27.9 bits (59), Expect = 5.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 126 STLHESVQSWRHCXHQRQWCSSKG 197
+ L + QSW +C +WC +KG
Sbjct: 248 TVLQLNPQSWGNCVSVEEWCKNKG 271
>01_06_0304 + 28340976-28342512,28342774-28342799,28343268-28343999
Length = 764
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 222 KDRSRVQRDCSCSRCDCQQACSRKDYTEAHQY 317
K ++ CSCS+ D +CS D A Y
Sbjct: 270 KGHLSIEEPCSCSKDDTDSSCSLADEHHARHY 301
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 171 QRQW-CS--SKGYATQSIPWKDRSRVQRDCSCS--RCDCQQACSRKDYTEAHQYPC 323
+++W C SK YA S WK S+V C RCDC SR+D H+ C
Sbjct: 148 EKKWKCDKCSKRYAVHS-DWKAHSKV---CGTREYRCDCGTLFSRRDSFITHRAFC 199
>07_01_0174 -
1227871-1228043,1228303-1228423,1228519-1228588,
1228877-1228953,1229215-1229393,1229558-1229684,
1229849-1229861,1230351-1230378,1230426-1230516,
1230870-1230956,1231239-1231276,1231426-1231464,
1231553-1231699,1231899-1231958,1232033-1232111,
1232429-1232517,1232906-1232967,1233238-1233427,
1233929-1234068,1235813-1236147,1237086-1237133
Length = 730
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 196 GMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKC 348
G P G T VY+V AH+ GVIV+ + I V+ ++H C
Sbjct: 137 GQPLLEMIGHTSLVYSVDAHSSGVIVSGSEDRSAKIWKDGICVQSIEHPGC 187
>02_01_0030 -
183836-183903,183986-184453,184526-184604,184698-185183
Length = 366
Score = 27.5 bits (58), Expect = 7.6
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = +1
Query: 145 YKVGDIVXIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIVNKRVRGRIIPKRI--NI 318
Y+ G + + +G + G PHK+ R+Y++ + A+G + + + + + N
Sbjct: 122 YREGQSIGVIPDGIDKNGKPHKL------RLYSIASSAIGDFADSKTVSLCVKRLVYTND 175
Query: 319 RVEHVKHSKCXQDFLXXVKXNXRLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 477
+ E VK C +FL +K + K G P P A I+ GT
Sbjct: 176 QGEIVK-GVC-SNFLCDLKPG----SDVKITGPVGKEMLMPKDPNATIIMLGT 222
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,391,409
Number of Sequences: 37544
Number of extensions: 290242
Number of successful extensions: 885
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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