Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_L06
         (554 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001760-1|AAN71515.1|  159|Drosophila melanogaster RH06526p pro...   207   7e-54
AY071556-1|AAL49178.1|  159|Drosophila melanogaster RE62581p pro...   207   7e-54
AE014134-3588|AAF57259.1|  159|Drosophila melanogaster CG12775-P...   207   7e-54
BT003470-1|AAO39473.1|  506|Drosophila melanogaster RE70685p pro...    30   2.4  
AE014134-789|AAF50967.3|  790|Drosophila melanogaster CG31660-PB...    30   2.4  
AE014134-788|AAX52647.1|  944|Drosophila melanogaster CG31660-PC...    30   2.4  
AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.     29   4.2  
AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-P...    29   4.2  
AE014298-789|AAN09151.2|  312|Drosophila melanogaster CG15771-PB...    28   9.7  
AE014298-788|AAF46077.4|  355|Drosophila melanogaster CG15771-PA...    28   9.7  
AE014296-2825|AAS64979.1| 1431|Drosophila melanogaster CG33256-P...    28   9.7  

>BT001760-1|AAN71515.1|  159|Drosophila melanogaster RH06526p
           protein.
          Length = 159

 Score =  207 bits (506), Expect = 7e-54
 Identities = 97/160 (60%), Positives = 121/160 (75%)
 Frame = +1

Query: 43  MTNSKGYXPRHQXTCSLAGSAHMELFRSPRYMKVYKVGDIVXIRGNGAVQKGMPHKVYHG 222
           MTNSKGY    +   S     H  +  S  YM+V+K+GDIV I+G+GAVQKG+P+K YHG
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLST-YMRVFKIGDIVDIKGHGAVQKGLPYKAYHG 59

Query: 223 KTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCXQDFLXXVKXNXRLLKEA 402
           KTGR++NVT HA+GVIVNKRVRG+I+ KR+N+R+EH+ HSKC +DFL  VK N RLLKEA
Sbjct: 60  KTGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEA 119

Query: 403 KAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 522
           K  G+ V+LKRQP  PK AH V   E+P+ LAPIPYEF+A
Sbjct: 120 KEKGQWVSLKRQPEQPKKAHFVKKLEEPIALAPIPYEFIA 159


>AY071556-1|AAL49178.1|  159|Drosophila melanogaster RE62581p
           protein.
          Length = 159

 Score =  207 bits (506), Expect = 7e-54
 Identities = 97/160 (60%), Positives = 121/160 (75%)
 Frame = +1

Query: 43  MTNSKGYXPRHQXTCSLAGSAHMELFRSPRYMKVYKVGDIVXIRGNGAVQKGMPHKVYHG 222
           MTNSKGY    +   S     H  +  S  YM+V+K+GDIV I+G+GAVQKG+P+K YHG
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLST-YMRVFKIGDIVDIKGHGAVQKGLPYKAYHG 59

Query: 223 KTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCXQDFLXXVKXNXRLLKEA 402
           KTGR++NVT HA+GVIVNKRVRG+I+ KR+N+R+EH+ HSKC +DFL  VK N RLLKEA
Sbjct: 60  KTGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEA 119

Query: 403 KAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 522
           K  G+ V+LKRQP  PK AH V   E+P+ LAPIPYEF+A
Sbjct: 120 KEKGQWVSLKRQPEQPKKAHFVKKLEEPIALAPIPYEFIA 159


>AE014134-3588|AAF57259.1|  159|Drosophila melanogaster CG12775-PA
           protein.
          Length = 159

 Score =  207 bits (506), Expect = 7e-54
 Identities = 97/160 (60%), Positives = 121/160 (75%)
 Frame = +1

Query: 43  MTNSKGYXPRHQXTCSLAGSAHMELFRSPRYMKVYKVGDIVXIRGNGAVQKGMPHKVYHG 222
           MTNSKGY    +   S     H  +  S  YM+V+K+GDIV I+G+GAVQKG+P+K YHG
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLST-YMRVFKIGDIVDIKGHGAVQKGLPYKAYHG 59

Query: 223 KTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCXQDFLXXVKXNXRLLKEA 402
           KTGR++NVT HA+GVIVNKRVRG+I+ KR+N+R+EH+ HSKC +DFL  VK N RLLKEA
Sbjct: 60  KTGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEA 119

Query: 403 KAAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 522
           K  G+ V+LKRQP  PK AH V   E+P+ LAPIPYEF+A
Sbjct: 120 KEKGQWVSLKRQPEQPKKAHFVKKLEEPIALAPIPYEFIA 159


>BT003470-1|AAO39473.1|  506|Drosophila melanogaster RE70685p
           protein.
          Length = 506

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
 Frame = +3

Query: 39  EDDELQGLPAAAPX-HLFARRFRTHGTIPLSTLHESV---QSWRHCXHQRQWCSSKGYAT 206
           EDD L     AAP  H    +FR + TIP   +H        WR       W S+ G   
Sbjct: 330 EDDNLLAFAIAAPSIHTVVVKFRDNVTIPPDQVHNKAYLGSYWRELG--AAWNSTDGTQE 387

Query: 207 QSIPWKDRSRVQR 245
              P++D + + R
Sbjct: 388 WGAPFRDCNLLTR 400


>AE014134-789|AAF50967.3|  790|Drosophila melanogaster CG31660-PB,
           isoform B protein.
          Length = 790

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
 Frame = +3

Query: 39  EDDELQGLPAAAPX-HLFARRFRTHGTIPLSTLHESV---QSWRHCXHQRQWCSSKGYAT 206
           EDD L     AAP  H    +FR + TIP   +H        WR       W S+ G   
Sbjct: 330 EDDNLLAFAIAAPSIHTVVVKFRDNVTIPPDQVHNKAYLGSYWRELG--AAWNSTDGTQE 387

Query: 207 QSIPWKDRSRVQR 245
              P++D + + R
Sbjct: 388 WGAPFRDCNLLTR 400


>AE014134-788|AAX52647.1|  944|Drosophila melanogaster CG31660-PC,
           isoform C protein.
          Length = 944

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
 Frame = +3

Query: 39  EDDELQGLPAAAPX-HLFARRFRTHGTIPLSTLHESV---QSWRHCXHQRQWCSSKGYAT 206
           EDD L     AAP  H    +FR + TIP   +H        WR       W S+ G   
Sbjct: 330 EDDNLLAFAIAAPSIHTVVVKFRDNVTIPPDQVHNKAYLGSYWRELG--AAWNSTDGTQE 387

Query: 207 QSIPWKDRSRVQR 245
              P++D + + R
Sbjct: 388 WGAPFRDCNLLTR 400


>AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.
          Length = 1854

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +1

Query: 244 VTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCXQDFLXXVKXNXRLLKE 399
           V     G+   +R +  IIP   N ++E  +HS    +    +  N RL+ E
Sbjct: 612 VNGQTNGIPTRRRPKSSIIPSSSNGKLEQREHSLVTSESFHQISDNLRLMSE 663


>AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-PD,
           isoform D protein.
          Length = 1854

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +1

Query: 244 VTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCXQDFLXXVKXNXRLLKE 399
           V     G+   +R +  IIP   N ++E  +HS    +    +  N RL+ E
Sbjct: 612 VNGQTNGIPTRRRPKSSIIPSSSNGKLEQREHSLVTSESFHQISDNLRLMSE 663


>AE014298-789|AAN09151.2|  312|Drosophila melanogaster CG15771-PB,
           isoform B protein.
          Length = 312

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 138 ESVQSWRHCXHQRQWCSSKGYATQSIPWKDRSRVQRDCSC 257
           E  Q   H  HQRQW   +G    S+P  D S  + + SC
Sbjct: 272 EQQQQHHHHHHQRQWLYRRGV---SLPAMDCSNSEAENSC 308


>AE014298-788|AAF46077.4|  355|Drosophila melanogaster CG15771-PA,
           isoform A protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +3

Query: 138 ESVQSWRHCXHQRQWCSSKGYATQSIPWKDRSRVQRDCSC 257
           E  Q   H  HQRQW   +G    S+P  D S  + + SC
Sbjct: 315 EQQQQHHHHHHQRQWLYRRGV---SLPAMDCSNSEAENSC 351


>AE014296-2825|AAS64979.1| 1431|Drosophila melanogaster CG33256-PA
           protein.
          Length = 1431

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 443 LPLKLPTSSVELRNPSYLRLSHTNS 517
           LPL LPT S+E+  P     SHT +
Sbjct: 339 LPLPLPTISIEIAEPPEENASHTEA 363


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,468,440
Number of Sequences: 53049
Number of extensions: 479638
Number of successful extensions: 1523
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)