Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L06
(554 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 157 4e-39
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 30 0.97
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical ... 29 2.2
Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z70309-1|CAA94355.1| 133|Caenorhabditis elegans Hypothetical pr... 27 9.1
AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical ... 27 9.1
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 157 bits (382), Expect = 4e-39
Identities = 84/162 (51%), Positives = 105/162 (64%), Gaps = 2/162 (1%)
Frame = +1
Query: 43 MTNSKGYXPRHQXTCSLAGSAHMELFRSPRYMKVYKVGDIVXIRGNGAVQKGMPHKVYHG 222
MTNSKG + + H S Y + YK GD+V I+ NGA QKGMP K YHG
Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQ-YKRGDLVDIKTNGAFQKGMPFKAYHG 59
Query: 223 KTGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCXQDFLXXVKXNXRLLKEA 402
+TGR++NVT A+G+IVNKRVRG I+PKRINIR+EH+K SKC DFL VK N K A
Sbjct: 60 RTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAA 119
Query: 403 KAAGKTV-NLKRQPAPPKAAH-IVSGTEKPVLLAPIPYEFVA 522
K+AG+ V LKR P P+ AH + + +P LLAP+ +E VA
Sbjct: 120 KSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIVA 161
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 30.3 bits (65), Expect = 0.97
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 147 QSWRHCXHQRQWCSSKGYATQSIPWKDRSRVQRDCSCSRCDCQQAC 284
Q RHC Q C S Y W+ RSRV +C+ + Q C
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQIC 411
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 424 NLKRQPAPPKAAHIVSGTE 480
NL+R+PAPPK H+ S E
Sbjct: 462 NLRRRPAPPKQNHVASPAE 480
>AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical
protein Y80D3A.9 protein.
Length = 279
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 489 DGFLSSTDDVGSFRGSWLSLQVDGLAGSL 403
DG LS D+ RG+WL + G G L
Sbjct: 39 DGMLSGVDEKDVARGTWLGMDAHGKVGML 67
>Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical
protein R186.1 protein.
Length = 276
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 489 DGFLSSTDDVGSFRGSWLSLQVDGLAGSL 403
DG LS D + RG+WL L +G G +
Sbjct: 39 DGILSGVDKQENARGTWLGLNENGRIGMM 67
>Z81491-1|CAB04019.1| 181|Caenorhabditis elegans Hypothetical
protein D1086.1 protein.
Length = 181
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 204 TQSIPW--KDRSRVQRDCSCSRCDCQQACSRKDYTEA 308
T+ + W D+SR+ D C++ ++ C KD+ +A
Sbjct: 120 TECVQWYFSDKSRMSTDQKCAQFKAKKQCIEKDFGKA 156
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 240 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 335
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 240 QRDCSCS-RCDCQQACSRKDYTEAHQYPC*ACQ 335
++ C C+ R +C R YT+ QY C +CQ
Sbjct: 26 RQSCGCAPRVQPSCSCQRTTYTQPQQYSC-SCQ 57
>Z70309-1|CAA94355.1| 133|Caenorhabditis elegans Hypothetical
protein R102.1 protein.
Length = 133
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 45 DELQGLPAAAPXHLFARRFRTHGTIPLSTLHE 140
DE++ L AA FA++F T I + LHE
Sbjct: 19 DEMKALKAAGKQDEFAKKFVTKDAIFMGPLHE 50
>AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical
protein T08D2.5 protein.
Length = 325
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -3
Query: 204 WHTLLNCTIASDVYNVSNFVHFHVAWRAE*FHVCGTC 94
+H CTI Y++ F+ + + F +C TC
Sbjct: 8 FHICRECTIQQHEYDIHTFIDQEPSIHPDAFTICSTC 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,754,292
Number of Sequences: 27780
Number of extensions: 233076
Number of successful extensions: 751
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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