Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L05
(409 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071725-1|AAL49347.1| 92|Drosophila melanogaster RH41593p pro... 151 5e-37
AY071189-1|AAL48811.1| 92|Drosophila melanogaster RE23595p pro... 151 5e-37
AE014134-878|AAN10530.1| 92|Drosophila melanogaster CG5827-PB,... 151 5e-37
AE014134-877|AAF52217.1| 92|Drosophila melanogaster CG5827-PA,... 151 5e-37
BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p pro... 32 0.33
AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-P... 31 0.77
AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA... 30 1.3
EF057934-1|ABL84869.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057933-1|ABL84868.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057932-1|ABL84867.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057931-1|ABL84866.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057930-1|ABL84865.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057929-1|ABL84864.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057928-1|ABL84863.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057927-1|ABL84862.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057926-1|ABL84861.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057925-1|ABL84860.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057924-1|ABL84859.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
EF057923-1|ABL84858.1| 668|Drosophila melanogaster Nup75 protein. 27 9.5
AY070887-1|AAL48509.1| 668|Drosophila melanogaster LD29726p pro... 27 9.5
AE013599-2638|AAF57735.1| 668|Drosophila melanogaster CG5733-PA... 27 9.5
>AY071725-1|AAL49347.1| 92|Drosophila melanogaster RH41593p
protein.
Length = 92
Score = 151 bits (365), Expect = 5e-37
Identities = 68/88 (77%), Positives = 73/88 (82%)
Frame = +1
Query: 55 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 234
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60
Query: 235 KRTVXXGAWVFXXXXXXXXXXXVRRLRE 318
KRTV GAWV+ VRRLRE
Sbjct: 61 KRTVAGGAWVYSTTAAASVRSAVRRLRE 88
>AY071189-1|AAL48811.1| 92|Drosophila melanogaster RE23595p
protein.
Length = 92
Score = 151 bits (365), Expect = 5e-37
Identities = 68/88 (77%), Positives = 73/88 (82%)
Frame = +1
Query: 55 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 234
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60
Query: 235 KRTVXXGAWVFXXXXXXXXXXXVRRLRE 318
KRTV GAWV+ VRRLRE
Sbjct: 61 KRTVAGGAWVYSTTAAASVRSAVRRLRE 88
>AE014134-878|AAN10530.1| 92|Drosophila melanogaster CG5827-PB,
isoform B protein.
Length = 92
Score = 151 bits (365), Expect = 5e-37
Identities = 68/88 (77%), Positives = 73/88 (82%)
Frame = +1
Query: 55 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 234
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60
Query: 235 KRTVXXGAWVFXXXXXXXXXXXVRRLRE 318
KRTV GAWV+ VRRLRE
Sbjct: 61 KRTVAGGAWVYSTTAAASVRSAVRRLRE 88
>AE014134-877|AAF52217.1| 92|Drosophila melanogaster CG5827-PA,
isoform A protein.
Length = 92
Score = 151 bits (365), Expect = 5e-37
Identities = 68/88 (77%), Positives = 73/88 (82%)
Frame = +1
Query: 55 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSCKRC 234
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCGKD+MKR+ VGIWSCKRC
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRC 60
Query: 235 KRTVXXGAWVFXXXXXXXXXXXVRRLRE 318
KRTV GAWV+ VRRLRE
Sbjct: 61 KRTVAGGAWVYSTTAAASVRSAVRRLRE 88
>BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p
protein.
Length = 918
Score = 31.9 bits (69), Expect = 0.33
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -3
Query: 155 CWVTSIFLTILRREAP*RVPYLPVIPTFLVRLAILVNLSDTKVDR 21
C V SI LTI R+PY+ +I FL L++L+NL T DR
Sbjct: 543 CVVLSI-LTIALTAIGLRIPYMCMISLFLYILSLLINLLTTLHDR 586
>AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-PA
protein.
Length = 1290
Score = 30.7 bits (66), Expect = 0.77
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 88 GKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGK 186
G YG+ +G S M+ M +H + C +C K
Sbjct: 219 GWYGSEFGLSAYGMLMAMSHAEHLPFKCEYCSK 251
>AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA
protein.
Length = 1736
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 139 MEVTQHAKYTCSFCGKDAMKRSCV 210
M+ TQH +TC +C + A +R+ V
Sbjct: 353 MQYTQHTTHTCDYCKRTASQRTAV 376
>EF057934-1|ABL84869.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057933-1|ABL84868.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057932-1|ABL84867.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057931-1|ABL84866.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057930-1|ABL84865.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057929-1|ABL84864.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057928-1|ABL84863.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057927-1|ABL84862.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057926-1|ABL84861.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057925-1|ABL84860.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057924-1|ABL84859.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057923-1|ABL84858.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>AY070887-1|AAL48509.1| 668|Drosophila melanogaster LD29726p
protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>AE013599-2638|AAF57735.1| 668|Drosophila melanogaster CG5733-PA
protein.
Length = 668
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 45 VYQNGQTYQKGWNYWQIWH 101
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,374,530
Number of Sequences: 53049
Number of extensions: 286414
Number of successful extensions: 1002
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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