Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_L03
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    44   4e-06
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    26   0.83 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   1.5  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   1.9  
AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    23   7.8  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   7.8  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   7.8  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.8  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 44.0 bits (99), Expect = 4e-06
 Identities = 24/75 (32%), Positives = 40/75 (53%)
 Frame = +3

Query: 330 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVXADG 509
           MA+ L + +I + +  FS++D +G G +   +LG  +R+L  NPT  EL   +      G
Sbjct: 1   MANDLKDVEIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPT-IELIGKMGGTQKRG 59

Query: 510 NGTIDFPEFLTMMAR 554
              I F EFL + ++
Sbjct: 60  EKKIKFEEFLPIFSQ 74



 Score = 39.1 bits (87), Expect = 1e-04
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +3

Query: 363 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--XADGNGTIDFPEF 536
           +F E   L+DK+ DGT+   EL   + +LG+   + EL +++ +     D +G I +  F
Sbjct: 86  DFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDPEDDDGNIPYAPF 145

Query: 537 LTMMARKM 560
           L  M   M
Sbjct: 146 LKKMMDNM 153


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 26.2 bits (55), Expect = 0.83
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 483 MINEVXADGN-GTIDFPEFLTMMARKMNDTDSEEEIREGFRVFT 611
           ++ E  AD    +I+ P+FL ++ +  N    E+E  EG +  T
Sbjct: 253 LVTETVADRERNSIERPDFLNLLIQLKNKGTVEDETTEGLQKLT 296


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 135 CDESSSRFGTIRGRARSEPRSRVSQRGHS 221
           CDE+ S   TI+      PR R +  GHS
Sbjct: 198 CDETPSDHNTIKFVVGRVPRQRANYVGHS 226


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = -2

Query: 302 YTKKSQTTPQKRPHGPTAETILPPSLARVASLRN 201
           Y   S   PQ   H P  E  LP SL R + +RN
Sbjct: 232 YPASSLLLPQDAHH-PALEIALPSSLFRASRVRN 264


>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
 Frame = +2

Query: 458 PHRSRTSRHDQ*SXR---GRKRHDRLSRVLDNDGAQDE 562
           P      RH   S R   G   H R  R+ D+DG   E
Sbjct: 112 PEEKLRGRHSSESDREGMGHDSHKRTHRLSDSDGGSTE 149


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 107 EG*FRKLQGGNGLHNDYPRNV 45
           +G FRK++ G+G    Y +NV
Sbjct: 365 DGGFRKVRMGDGFFTGYRKNV 385


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 548 HHCQELGKVYRAVSVRVYFIDHVLKFG 468
           HH +  G +Y  V+  V F   +L FG
Sbjct: 253 HHSKVYGTMYAKVTECVLFHKDILSFG 279


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 355 RSPSLRRHSHCSTKTAMAPSRPKS 426
           RSP  RR S  +  T+   SRP S
Sbjct: 272 RSPPARRRSRSTRPTSWPRSRPTS 295


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,958
Number of Sequences: 2352
Number of extensions: 11104
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)