Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L02
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q960A7 Cluster: SD10981p; n=13; Coelomata|Rep: SD10981p... 187 2e-46
UniRef50_Q9Y2L1 Cluster: Exosome complex exonuclease RRP44; n=35... 175 8e-43
UniRef50_Q9SNK4 Cluster: EST AU068209(C12438) corresponds to a r... 156 4e-37
UniRef50_A7PKV4 Cluster: Chromosome chr7 scaffold_20, whole geno... 153 5e-36
UniRef50_Q54BH9 Cluster: Putative uncharacterized protein; n=1; ... 142 5e-33
UniRef50_Q4P861 Cluster: Putative uncharacterized protein; n=2; ... 133 4e-30
UniRef50_Q0CT74 Cluster: Mitotic control protein dis3; n=16; Asc... 124 2e-27
UniRef50_A6RWQ8 Cluster: Putative uncharacterized protein; n=1; ... 116 4e-25
UniRef50_Q08162 Cluster: Exosome complex exonuclease RRP44; n=12... 107 2e-22
UniRef50_Q4RNE5 Cluster: Chromosome undetermined SCAF15013, whol... 104 2e-21
UniRef50_P37202 Cluster: Mitotic control protein dis3; n=1; Schi... 103 4e-21
UniRef50_A2FUQ4 Cluster: RNB-like protein; n=1; Trichomonas vagi... 89 9e-17
UniRef50_Q4RNE4 Cluster: Chromosome undetermined SCAF15013, whol... 85 1e-15
UniRef50_Q00YG1 Cluster: Exosomal 3'-5' exoribonuclease complex,... 85 2e-15
UniRef50_UPI000049906F Cluster: exosome complex exonuclease; n=1... 83 6e-15
UniRef50_Q4UH40 Cluster: Exosome complex exonuclease rrp44, puta... 83 7e-15
UniRef50_Q4DG23 Cluster: RRP44p homologue, putative; n=4; Trypan... 81 2e-14
UniRef50_A7S7H2 Cluster: Predicted protein; n=2; Nematostella ve... 73 6e-12
UniRef50_Q23DE7 Cluster: RNB-like protein; n=1; Tetrahymena ther... 69 7e-11
UniRef50_Q69Z56 Cluster: MKIAA1955 protein; n=17; Euteleostomi|R... 69 1e-10
UniRef50_Q4Q8N7 Cluster: Rrp44p homologue, putative; n=3; Leishm... 67 3e-10
UniRef50_UPI0000E4632C Cluster: PREDICTED: similar to mKIAA1955 ... 60 3e-08
UniRef50_Q17632 Cluster: Probable exosome complex exonuclease RR... 59 8e-08
UniRef50_A7AWK8 Cluster: RNB-like domain containing protein; n=1... 55 2e-06
UniRef50_Q4YNU8 Cluster: Mitotic control protein dis3 homologue,... 53 5e-06
UniRef50_A3FQ82 Cluster: Mitotic control protein dis3, putative;... 47 5e-04
UniRef50_Q8IDB6 Cluster: Mitotic control protein dis3 homologue,... 44 0.003
UniRef50_Q4T2G1 Cluster: Chromosome undetermined SCAF10273, whol... 41 0.022
UniRef50_Q5BYX9 Cluster: SJCHGC05889 protein; n=1; Schistosoma j... 37 0.37
UniRef50_A0CC06 Cluster: Chromosome undetermined scaffold_166, w... 34 2.6
UniRef50_Q7RG64 Cluster: Zinc finger C-x8-C-x5-C-x3-H type, puta... 33 4.5
UniRef50_Q554N6 Cluster: Putative uncharacterized protein; n=2; ... 33 4.5
UniRef50_Q8WTU9 Cluster: DIS3 mitotic control homolog (S. cerevi... 33 4.5
UniRef50_Q4T2G0 Cluster: Chromosome undetermined SCAF10273, whol... 33 6.0
UniRef50_Q54MQ8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q3E910 Cluster: Uncharacterized protein At5g27500.1; n=... 33 7.9
>UniRef50_Q960A7 Cluster: SD10981p; n=13; Coelomata|Rep: SD10981p -
Drosophila melanogaster (Fruit fly)
Length = 982
Score = 187 bits (455), Expect = 2e-46
Identities = 88/154 (57%), Positives = 108/154 (70%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFD 347
M T + F KTKRGNILKIVREHYLRDD+ CGS C C +++ L + + LF
Sbjct: 1 MQTLREFTRKTKRGNILKIVREHYLRDDIGCGSELCREC-FQNEVYQLTSQHANKSTLFK 59
Query: 348 FPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFY 527
FPHYL LDTNVVL QI VLEED L NV++L TVL EVKH+++A++ R +I+ ++ R FY
Sbjct: 60 FPHYLVLDTNVVLDQIDVLEEDVLRNVVVLTTVLNEVKHRSSAIYKRFNEIVHDRTRNFY 119
Query: 528 SFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
FVNEHH +TY R P E NDRNDR+IR AT W
Sbjct: 120 VFVNEHHKETYADREPDETANDRNDRAIRLATKW 153
>UniRef50_Q9Y2L1 Cluster: Exosome complex exonuclease RRP44; n=35;
Coelomata|Rep: Exosome complex exonuclease RRP44 - Homo
sapiens (Human)
Length = 958
Score = 175 bits (426), Expect = 8e-43
Identities = 78/155 (50%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCA-LF 344
M +KTFL KT+ G ++KIVREHYLRDD+ CG+ C C + LE P+ P + +
Sbjct: 1 MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVC 60
Query: 345 DFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKF 524
PHYL DTNV+LHQI VLE+ A+ NVI+LQTVL+EV++++ V+ R+ D+ +N+++ F
Sbjct: 61 PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHF 120
Query: 525 YSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
Y+F NEHH +TY+ + GE NDRNDR+IR A W
Sbjct: 121 YTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKW 155
>UniRef50_Q9SNK4 Cluster: EST AU068209(C12438) corresponds to a
region of the predicted gene; n=2; Magnoliophyta|Rep:
EST AU068209(C12438) corresponds to a region of the
predicted gene - Oryza sativa subsp. japonica (Rice)
Length = 908
Score = 156 bits (379), Expect = 4e-37
Identities = 76/159 (47%), Positives = 104/159 (65%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFD 347
M +KTF+ KT+ G + K+VREHYLRDD+ CG+A+C+TC + L + +
Sbjct: 1 MLQSKTFVKKTRAGRVQKVVREHYLRDDISCGAASCSTCGAVEHPLSADAAA-------- 52
Query: 348 FPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFY 527
L +DTNVVLHQI +LE A+ +V++L VL+EVK++N AVF R+ + SNK R+F+
Sbjct: 53 ---ILVVDTNVVLHQIDLLENPAIDDVVLLSVVLDEVKNKNLAVFNRIKALCSNKARRFF 109
Query: 528 SFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSWVRISL 644
F NEHH DTY+ GE NDRNDR+IR AT W + L
Sbjct: 110 VFTNEHHRDTYVKEMVGESPNDRNDRAIRVATRWYQSHL 148
>UniRef50_A7PKV4 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 943
Score = 153 bits (370), Expect = 5e-36
Identities = 75/159 (47%), Positives = 103/159 (64%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFD 347
M +K+F+ KTK+G ++K+VREHYLRDD+ CG++ C C D SP + L
Sbjct: 1 MLQSKSFVRKTKQGKVVKVVREHYLRDDIYCGASICKVC----DSSTARLSPSASTILI- 55
Query: 348 FPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFY 527
LDTNVVL+QI +LE A+ +V++L VLEEVK++N +V+ RL + SN RKF+
Sbjct: 56 ------LDTNVVLNQIDLLENPAIDDVVVLSVVLEEVKNKNISVYNRLRTLCSNSMRKFF 109
Query: 528 SFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSWVRISL 644
F NE+H DTY+ + GE NDRNDR+IR AT W + L
Sbjct: 110 VFSNEYHKDTYVKQMAGESPNDRNDRAIRVATQWYQSHL 148
>UniRef50_Q54BH9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1006
Score = 142 bits (345), Expect = 5e-33
Identities = 74/162 (45%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHK-DDELVLETSP--KSPCA 338
M + K F TK+G I+K+V E YLRDD+ CG +C C K + +E +
Sbjct: 1 MQSNKCFYKATKKGTIIKVVNEIYLRDDIPCGHDSCKECKIKLERRTTVEDRALLSNEIN 60
Query: 339 LFDFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKR 518
D L LDTNV+LHQI +LE+ + N IIL TVL+EVK QN A+F R+ D+I R
Sbjct: 61 TIDSDKILILDTNVILHQIDLLEDPTIKNCIILSTVLDEVKSQNRAIFNRIRDVIKESSR 120
Query: 519 KFYSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSWVRISL 644
KFY + NE+ T I R GE NDRNDR+IR AT W + L
Sbjct: 121 KFYVYSNEYSTFTSITRENGESPNDRNDRAIRVATQWYKSHL 162
>UniRef50_Q4P861 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1012
Score = 133 bits (321), Expect = 4e-30
Identities = 68/162 (41%), Positives = 96/162 (59%), Gaps = 12/162 (7%)
Frame = +3
Query: 186 FLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKS--------PCAL 341
+ KT RG +LKI+RE YLRDD+ CGS AC C H +L ++ P L
Sbjct: 23 YFRKTARGKVLKILRERYLRDDIACGSRACERCHHIHADLQRQSQENGSQNKIFLDPNGL 82
Query: 342 ----FDFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISN 509
D HYL LDTN LHQ+ ++E + T+VI+LQTV +EV+H++ +F RL ++IS+
Sbjct: 83 KNSKLDRNHYLILDTNAFLHQMDLIENPSFTDVIVLQTVADEVRHRSLPLFNRLKNLISD 142
Query: 510 KKRKFYSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSWVR 635
R+F+ F N+ +T + + E NDRNDR+IR A W R
Sbjct: 143 PDRRFWVFYNDFGRETAVLQHEHESPNDRNDRAIRTAAKWYR 184
>UniRef50_Q0CT74 Cluster: Mitotic control protein dis3; n=16;
Ascomycota|Rep: Mitotic control protein dis3 -
Aspergillus terreus (strain NIH 2624)
Length = 1034
Score = 124 bits (298), Expect = 2e-27
Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 8/160 (5%)
Frame = +3
Query: 174 TTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPH-----KDDELVLETSPKSPCA 338
T+K F+ TK G + KIVRE YLR D+ C S C+ CP + + P
Sbjct: 18 TSKIFVRSTKSGKVQKIVRELYLRQDIPCSSKLCSICPSVAPTDANGNIAPFVLSDQPAG 77
Query: 339 LFDFP--HYLXLDTNVVLHQIXVLEED-ALTNVIILQTVLEEVKHQNTAVFXRLLDIISN 509
FP HYL DTN +L+ + + E A +V+ILQTVLEE+K+Q+ ++ RLL +I
Sbjct: 78 TTAFPRGHYLVPDTNALLNGMDLFEHTGAFYDVVILQTVLEELKNQSLPLYNRLLSLIKT 137
Query: 510 KKRKFYSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
+++FY F NE +T++ R+P E NDRNDR++R W
Sbjct: 138 DEKRFYLFFNEFRLETHVRRNPDESINDRNDRAVRAVAKW 177
>UniRef50_A6RWQ8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 826
Score = 116 bits (280), Expect = 4e-25
Identities = 58/160 (36%), Positives = 95/160 (59%), Gaps = 8/160 (5%)
Frame = +3
Query: 174 TTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTC-----PHKDDELVLETSPKSPCA 338
++K ++ TK G + KIVRE YLR D+ C S C++C P + +P
Sbjct: 18 SSKVYVRSTKSGKVQKIVRELYLRQDIPCSSKLCDSCLKTAPPDASGVVPPFVLSDTPAG 77
Query: 339 LFDFP--HYLXLDTNVVLHQIXVLEE-DALTNVIILQTVLEEVKHQNTAVFXRLLDIISN 509
+P HYL DTN +L+ + + E+ A +VIILQTVLEE+++++ ++ RL+ + +
Sbjct: 78 TAAYPQGHYLVPDTNALLNALDLFEQASAFYDVIILQTVLEELRNRSLPLYNRLIGLTKS 137
Query: 510 KKRKFYSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
+ ++F+ F N+ +TY+ R GE NDRNDR++R+A W
Sbjct: 138 EDKRFHVFFNDFRLETYVVRETGESINDRNDRAVRRAVKW 177
>UniRef50_Q08162 Cluster: Exosome complex exonuclease RRP44; n=12;
Ascomycota|Rep: Exosome complex exonuclease RRP44 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1001
Score = 107 bits (258), Expect = 2e-22
Identities = 65/167 (38%), Positives = 92/167 (55%), Gaps = 11/167 (6%)
Frame = +3
Query: 162 DEMWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPH-----KDDEL---VLET 317
D + T+ +++ G KIVREHYLR D+ C S +C CP +EL +L
Sbjct: 15 DGLSVTQKVFVRSRNGGATKIVREHYLRSDIPCLSRSCTKCPQIVVPDAQNELPKFILSD 74
Query: 318 SPKSPCALFDFPHYLXLDTNVVLHQIXVLEE-DALTNVIILQTVLEEVKHQNTAVFXRLL 494
SP A HY+ LDTNVVL I +LE + +VI+ Q VL+EV++++ V+ RL
Sbjct: 75 SPLELSAPIG-KHYVVLDTNVVLQAIDLLENPNCFFDVIVPQIVLDEVRNKSYPVYTRLR 133
Query: 495 DII--SNKKRKFYSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
+ S+ ++F F NE T++ R P E NDRNDR+IRK W
Sbjct: 134 TLCRDSDDHKRFIVFHNEFSEHTFVERLPNETINDRNDRAIRKTCQW 180
>UniRef50_Q4RNE5 Cluster: Chromosome undetermined SCAF15013, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF15013,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 855
Score = 104 bits (249), Expect = 2e-21
Identities = 43/80 (53%), Positives = 62/80 (77%)
Frame = +3
Query: 390 QIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVNEHHXDTYIXR 569
Q+ VLE+ + NV+ILQTVL+EV+H++ V+ R+ D+I +K++ FY+F NEHH +T+I R
Sbjct: 20 QVDVLEDPVIRNVVILQTVLQEVRHRSAPVYKRVKDMIHDKEKHFYTFTNEHHRETFIER 79
Query: 570 SPGEKQNDRNDRSIRKATSW 629
PGE NDRNDR+IR A+ W
Sbjct: 80 EPGESANDRNDRAIRVASRW 99
>UniRef50_P37202 Cluster: Mitotic control protein dis3; n=1;
Schizosaccharomyces pombe|Rep: Mitotic control protein
dis3 - Schizosaccharomyces pombe (Fission yeast)
Length = 970
Score = 103 bits (247), Expect = 4e-21
Identities = 60/152 (39%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Frame = +3
Query: 195 KTKRGNILKIVREHYLRDDLLCGSAACNTC----PHKDDELVLETS-PKSPCALFDFPH- 356
+ RG + K+VRE YLR+D+ C S AC C P VLE + P L F H
Sbjct: 24 RATRGKVQKVVREQYLRNDIPCQSRACPLCRSKLPKDSRGNVLEPILSEKPMFLEKFGHH 83
Query: 357 YLXLDTNVVLHQIXVLEE-DALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSF 533
YL D+N+ H I LE + +VIILQTV E+ ++ ++ R+ + K ++F F
Sbjct: 84 YLIPDSNIFYHCIDALEHPNNFFDVIILQTVFSEISSKSIPLYNRMKRLCQEKTKRFTPF 143
Query: 534 VNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
NE DT++ R E NDRNDR+IR A SW
Sbjct: 144 SNEFFVDTFVERLDDESANDRNDRAIRNAASW 175
>UniRef50_A2FUQ4 Cluster: RNB-like protein; n=1; Trichomonas
vaginalis G3|Rep: RNB-like protein - Trichomonas
vaginalis G3
Length = 863
Score = 89.0 bits (211), Expect = 9e-17
Identities = 50/156 (32%), Positives = 85/156 (54%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFD 347
M T K L T+RGN++++VREHYLR+D+ C L + ++P D
Sbjct: 1 MRTHKVQLLSTRRGNVVRLVREHYLRNDIDCR---------------LPGASENPFTTED 45
Query: 348 FPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFY 527
L +D+ +L+QI L+ A TNV+ILQTV E V+ ++ ++ L ++S ++ F
Sbjct: 46 AKFVLAIDSETILNQIDALQHQAFTNVVILQTVYEMVRQKSKSIQKNLDKLLSTPEKHFM 105
Query: 528 SFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSWVR 635
F NEH +TY+ +S + +D +I A ++++
Sbjct: 106 LFANEHLLETYVEQSEDQTIQQNHDANIINALNYLQ 141
>UniRef50_Q4RNE4 Cluster: Chromosome undetermined SCAF15013, whole
genome shotgun sequence; n=3; Eukaryota|Rep: Chromosome
undetermined SCAF15013, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 82
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFD 347
M +KTF+ KT+ G ++K+VREHYLRDD+ CGS C C K + VL+ + L D
Sbjct: 1 MLKSKTFVKKTRSGGVVKVVREHYLRDDIWCGSECCIEC--KQESGVLQKDARIESNLCD 58
Query: 348 FPHYLXLDTNVVLHQI 395
+PHYL DTNVVLHQ+
Sbjct: 59 YPHYLIPDTNVVLHQV 74
>UniRef50_Q00YG1 Cluster: Exosomal 3'-5' exoribonuclease complex,
subunit Rrp44/Dis3; n=2; Ostreococcus|Rep: Exosomal
3'-5' exoribonuclease complex, subunit Rrp44/Dis3 -
Ostreococcus tauri
Length = 975
Score = 84.6 bits (200), Expect = 2e-15
Identities = 36/90 (40%), Positives = 60/90 (66%)
Frame = +3
Query: 366 LDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVNEH 545
+D+NV LHQ+ L + + +V+I TV+EE + ++ + + RL ++ + +++FY F NEH
Sbjct: 71 IDSNVALHQLDALADGRVRDVVICATVMEETRARSRSSYERLREMCRDVEKRFYVFSNEH 130
Query: 546 HXDTYIXRSPGEKQNDRNDRSIRKATSWVR 635
H +TY+ GE NDRNDR+IR A ++ R
Sbjct: 131 HGETYVEDVAGESANDRNDRAIRAAAAFYR 160
>UniRef50_UPI000049906F Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 901
Score = 83.0 bits (196), Expect = 6e-15
Identities = 46/138 (33%), Positives = 75/138 (54%)
Frame = +3
Query: 219 KIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXLDTNVVLHQIX 398
KIVR+HYLRDD+ CG C TC + L+ +T Y D V+L+QI
Sbjct: 19 KIVRQHYLRDDIACGLRKCATCNQTNLPLIGKTQ------------YAMFDHTVLLNQID 66
Query: 399 VLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVNEHHXDTYIXRSPG 578
L+ ++LT+ II QT L V + + +++ ++ +II+N+ R + F+NE +TYI
Sbjct: 67 ALQTESLTDFIIPQTALNYVANNSKSIYKKVRNIIANEDRAVFLFLNEFFRETYIIAQNE 126
Query: 579 EKQNDRNDRSIRKATSWV 632
E R+ R+ + +W+
Sbjct: 127 ESNIHRDFRAYVTSVNWL 144
>UniRef50_Q4UH40 Cluster: Exosome complex exonuclease rrp44,
putative; n=2; Theileria|Rep: Exosome complex
exonuclease rrp44, putative - Theileria annulata
Length = 955
Score = 82.6 bits (195), Expect = 7e-15
Identities = 45/150 (30%), Positives = 79/150 (52%)
Frame = +3
Query: 180 KTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHY 359
++F + + N+ +I RE Y R+DL CG +C+ CP+ + L + P + F
Sbjct: 15 RSFWKVSGKSNLKRITREIYFRNDLGCGVNSCDACPNSLTQRKLNA--ELPIIILSF--- 69
Query: 360 LXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVN 539
++ + VLEE L N +I TV+ E++ ++ + RL ++ N +R FY F N
Sbjct: 70 -----EIINNNFVVLEE-FLKNCVIPVTVINEIRRRSLTQYNRLKKLVKNSERTFYVFSN 123
Query: 540 EHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
E+ DT++ PGE ++R+ R+I + W
Sbjct: 124 ENLKDTFVEELPGESVSERDQRAILQCAYW 153
>UniRef50_Q4DG23 Cluster: RRP44p homologue, putative; n=4;
Trypanosoma|Rep: RRP44p homologue, putative -
Trypanosoma cruzi
Length = 972
Score = 81.0 bits (191), Expect = 2e-14
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +3
Query: 243 RDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL--DTNVVLHQIXVLEEDA 416
R+D+ CG C+ C + PC + P L + DTNVVLH + LE+
Sbjct: 26 RNDIGCGIVGCSLCASA------VCGERGPCVV---PTSLIIIPDTNVVLHNMNALEDAQ 76
Query: 417 LTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVNEHHXDTYIXRSPGEKQNDR 596
+ N++ L TV+ EV+++N ++ RL ++ ++++ Y F N+ H T+ E ND
Sbjct: 77 VQNIVFLSTVVSEVQNRNKGIYARLQRLLGEERKQCYVFSNDRHEQTHCMVEREETPNDY 136
Query: 597 NDRSIRKATSW 629
NDR IR A W
Sbjct: 137 NDRCIRVAARW 147
>UniRef50_A7S7H2 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1048
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = +3
Query: 174 TTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFP 353
T K KTKR ++ +VREHYLR D+ C S+ C C + + L + D
Sbjct: 4 TNKLLRLKTKRSRLVNVVREHYLRTDISCHSSLCQECKNNNTPTGLVSLSS------DLT 57
Query: 354 HYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNT-AVFXRLLDIISNKKRKFYS 530
HY+ D V + + E + VI QTV ++H + + RL +++ + +++
Sbjct: 58 HYVVPDCEVSKLYLEIFEFPEIQGVIFFQTVKNHLQHSGSRKLLSRLKNLVKDTRQQCTF 117
Query: 531 FVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
F NE Y+ R GE D R W
Sbjct: 118 FSNEFCEGAYVPREAGESLQDWQARCTYAGVLW 150
>UniRef50_Q23DE7 Cluster: RNB-like protein; n=1; Tetrahymena
thermophila SB210|Rep: RNB-like protein - Tetrahymena
thermophila SB210
Length = 946
Score = 69.3 bits (162), Expect = 7e-11
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
Frame = +3
Query: 195 KTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXLDT 374
K +RG I K V E YLRDD+ CG C C + L +E ++ LD
Sbjct: 11 KYRRGGIGKKVTELYLRDDISCGLVNCQICKTPGNTLHIEGEDRT---------IFILDE 61
Query: 375 NVVLHQIXV-LEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNK-KRKFYSFVNEHH 548
VL Q+ V L L NV+++QT + ++ +N + L +++ + R + + NE+
Sbjct: 62 YTVLTQLDVILNCPKLVNVVLMQTTVHNIQKKNQNTYTSLRNLVEGEIYRNIHIYANEYS 121
Query: 549 XDTYIXRSPGEKQNDRNDRSIRKATSWVRISLE 647
TY EKQ R+ R++ +A W + L+
Sbjct: 122 KYTYTPIQQNEKQETRDTRAVLEAAVWYQNHLK 154
>UniRef50_Q69Z56 Cluster: MKIAA1955 protein; n=17; Euteleostomi|Rep:
MKIAA1955 protein - Mus musculus (Mouse)
Length = 1073
Score = 68.9 bits (161), Expect = 1e-10
Identities = 46/152 (30%), Positives = 68/152 (44%), Gaps = 2/152 (1%)
Frame = +3
Query: 180 KTFLTKTKRGNILKIVREHYLRDDLLCGSAAC-NTCPHKDDELVLETSPKSPCALFDFPH 356
K L +T +G L+IVREHYLR + C S C ++D +L + H
Sbjct: 27 KVLLLRTFQGRTLRIVREHYLRPSVPCNSPLCPQPAACRNDGKLLAA---------EVTH 77
Query: 357 YLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQ-NTAVFXRLLDIISNKKRKFYSF 533
Y+ D VV + VLE L VI +QT + V+HQ + +L +++ + + F
Sbjct: 78 YVIPDWKVVQDYLEVLEFPELKGVIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLF 137
Query: 534 VNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
NE Y+ R GE RSI + W
Sbjct: 138 ANEFQQHCYLPREKGEAMEKWQTRSIYNSAVW 169
>UniRef50_Q4Q8N7 Cluster: Rrp44p homologue, putative; n=3;
Leishmania|Rep: Rrp44p homologue, putative - Leishmania
major
Length = 920
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/76 (36%), Positives = 48/76 (63%)
Frame = +3
Query: 402 LEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVNEHHXDTYIXRSPGE 581
+E+ + N+I+L TV+ EV+++N A++ RL ++ + K++ + F N+ H T+ R E
Sbjct: 4 IEDSRVQNIILLTTVMREVQNRNKAMYARLQRLLGDDKKQCFVFANDRHEQTHCMRKREE 63
Query: 582 KQNDRNDRSIRKATSW 629
ND NDR+IR A W
Sbjct: 64 SLNDFNDRAIRVAAQW 79
>UniRef50_UPI0000E4632C Cluster: PREDICTED: similar to mKIAA1955
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to mKIAA1955 protein -
Strongylocentrotus purpuratus
Length = 887
Score = 60.5 bits (140), Expect = 3e-08
Identities = 44/156 (28%), Positives = 67/156 (42%)
Frame = +3
Query: 180 KTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHY 359
K KTK+G L++VRE YLRDD+ C S CP S C + HY
Sbjct: 6 KVIQLKTKQGKPLRVVREQYLRDDVPCNS---ELCPK-------SCSMSERCVGRNVSHY 55
Query: 360 LXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVN 539
+ D + +LE + +I+LQTVL + + + RL + +KK+ F +
Sbjct: 56 VIPDGGTARDYLDILELEEFRGLIVLQTVL-HFHNGSRRLLNRLKGKVKDKKQGCAFFAD 114
Query: 540 EHHXDTYIXRSPGEKQNDRNDRSIRKATSWVRISLE 647
E + R GE + + R + + W LE
Sbjct: 115 EFCRGAFSPRQHGESEEEWQTRLVYASAVWYYNHLE 150
>UniRef50_Q17632 Cluster: Probable exosome complex exonuclease
RRP44; n=2; Caenorhabditis|Rep: Probable exosome complex
exonuclease RRP44 - Caenorhabditis elegans
Length = 1029
Score = 59.3 bits (137), Expect = 8e-08
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +3
Query: 195 KTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXLDT 374
+ + G + K E YLR+DL CG A C TC +L+ A H L +D+
Sbjct: 21 QNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDFGTNPLLKIENPVRNAKVG-RHALIVDS 79
Query: 375 NVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDI-ISNKKRKFYSFVNEHHX 551
++ + + L ++I+ QTV E VK + + ++ + + K +F+ F+NE H
Sbjct: 80 TSLIRFYDLFDSSLLRDLIVTQTVWEGVKAKAVPAYKKMNSLCYEDAKDRFHVFMNEFHC 139
Query: 552 DTYIXRSPGE 581
+T+ S E
Sbjct: 140 ETFSESSKFE 149
>UniRef50_A7AWK8 Cluster: RNB-like domain containing protein; n=1;
Babesia bovis|Rep: RNB-like domain containing protein -
Babesia bovis
Length = 951
Score = 54.8 bits (126), Expect = 2e-06
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Frame = +3
Query: 174 TTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFP 353
+ +TF + N+ + RE Y R DL CG +C CP + L+ S
Sbjct: 17 SVRTFWRASGHSNVKRFTREVYYRTDLGCGLDSCTECPRSSTQGTLDGSKP--------- 67
Query: 354 HYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLL---------DIIS 506
L L +V+L+Q+ E L N +I TV EV+ ++ ++ R+ D++
Sbjct: 68 -ILILTVDVLLNQMTFCER-CLDNCVIPATVANEVRRRSLTLYARMKRLILSGTGNDVVM 125
Query: 507 NK----KRKFYSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSWVR 635
N + FY F NE+ T++ R++ I + W R
Sbjct: 126 NDVDHVPKSFYLFSNENFEPTHVEERGNITTAQRDELLIERCAEWYR 172
>UniRef50_Q4YNU8 Cluster: Mitotic control protein dis3 homologue,
putative; n=9; Plasmodium|Rep: Mitotic control protein
dis3 homologue, putative - Plasmodium berghei
Length = 1015
Score = 53.2 bits (122), Expect = 5e-06
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Frame = +3
Query: 180 KTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHY 359
K F I K+VRE YLR+D+ C C C +K +L L +
Sbjct: 17 KCFYKCNANNRITKVVREIYLRNDINCSIEKCKVCENKKKKL-----------LDGDRNI 65
Query: 360 LXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDI-------ISNKKR 518
L LDT+ ++ I L E + N++I T+ E ++ N ++ +L ++ I N +
Sbjct: 66 LILDTSTIIKYIDFLYECNIDNILIPLTIYEHIRTFNKILYKKLHELCYEIDESIPNSNK 125
Query: 519 KFYSFVNEHHXDTYI 563
++ FVN++ TY+
Sbjct: 126 RYSVFVNKYCKFTYV 140
>UniRef50_A3FQ82 Cluster: Mitotic control protein dis3, putative;
n=3; Cryptosporidium|Rep: Mitotic control protein dis3,
putative - Cryptosporidium parvum Iowa II
Length = 922
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/111 (25%), Positives = 61/111 (54%)
Frame = +3
Query: 180 KTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHY 359
K+++ KT+RG I K+ E Y+R+++LCG C C K + ++ K+ + FP++
Sbjct: 20 KSYIKKTRRGKIRKVSNEIYVRNEILCGLNFCTLCYGKYSGI---SNQKARNII--FPNF 74
Query: 360 LXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNK 512
+ + +LE+++L +V+I ++L+ + + V +L + + N+
Sbjct: 75 DIFNK----YSDFILEDESLNHVVIPYSILDYLNETDRTVINKLRNKLRNQ 121
>UniRef50_Q8IDB6 Cluster: Mitotic control protein dis3 homologue,
putative; n=1; Plasmodium falciparum 3D7|Rep: Mitotic
control protein dis3 homologue, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1062
Score = 44.0 bits (99), Expect = 0.003
Identities = 30/112 (26%), Positives = 52/112 (46%)
Frame = +3
Query: 165 EMWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALF 344
E K F I KIVRE YLR+D+ CG CN C + +L+ +S
Sbjct: 12 ERHVQKYFYKLNANNRINKIVREVYLRNDISCGIEKCNICENNKKKLL--DGERS----- 64
Query: 345 DFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDI 500
L LD N ++ + L + + N++I ++ + +K N ++ +L ++
Sbjct: 65 ----ILILDLNTLIKYMDFLYDCDIDNILIPLSIYDYIKSFNKILYKKLRNL 112
>UniRef50_Q4T2G1 Cluster: Chromosome undetermined SCAF10273, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10273, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1074
Score = 41.1 bits (92), Expect = 0.022
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 345 DFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKH-QNTAVFXRLLDIISNKKRK 521
D HY+ D VVL +LE L ++ QT + V+H + + RL +I + +
Sbjct: 8 DVTHYVVPDVGVVLDYQEILEFRELQGIVFTQTACQAVQHSKGRRQYNRLRSLIKDPRHD 67
Query: 522 FYSFVNEHHXDTYIXRSPGE 581
F NE Y R GE
Sbjct: 68 CVLFSNEFQEYCYCSREKGE 87
>UniRef50_Q5BYX9 Cluster: SJCHGC05889 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05889 protein - Schistosoma
japonicum (Blood fluke)
Length = 599
Score = 37.1 bits (82), Expect = 0.37
Identities = 38/152 (25%), Positives = 57/152 (37%), Gaps = 2/152 (1%)
Frame = +3
Query: 180 KTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHY 359
KT KT RG + RE YLRDD+ C S C+ E C D Y
Sbjct: 14 KTISYKTPRGKEVCFTREVYLRDDVPCRSLLCSR---------TECHEGGHCLPSDLKLY 64
Query: 360 LXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTA--VFXRLLDIISNKKRKFYSF 533
+ +D L+ + E + + VII + L V+ Q + + R+ + + + F
Sbjct: 65 ILVDGFYALYYWELFELEDIKGVIISLSSLNFVQQQASTKRPYRRIRSSLEDASQTCILF 124
Query: 534 VNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
NE + E D R A +W
Sbjct: 125 DNEFSRLCFHPPFASENLKDYTTRMNWVAANW 156
>UniRef50_A0CC06 Cluster: Chromosome undetermined scaffold_166,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_166,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 897
Score = 34.3 bits (75), Expect = 2.6
Identities = 27/122 (22%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Frame = +3
Query: 201 KRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXLDTNV 380
KR ++ +E YL D+ C C C +++ ++ LE P ++ LD +
Sbjct: 13 KRLQVMIQAKEVYLSSDIPCQIRGCAFC-NQESDIQLEN-----------PIFM-LDNEI 59
Query: 381 VLHQIXVLEEDALTNVIILQTVLE--EVKHQNTAVFXRLLDII-SNKKRKFYSFVNEHHX 551
+ I ++E+ + N+++LQ+ + + Q + +++++I SN +K Y + +E
Sbjct: 60 LEQYIDLIEQSNINNIVVLQSQVAYFRKRQQQSQYAQQMINLIESNFSKKIYVYQDEFSI 119
Query: 552 DT 557
T
Sbjct: 120 HT 121
>UniRef50_Q7RG64 Cluster: Zinc finger C-x8-C-x5-C-x3-H type,
putative; n=4; Plasmodium|Rep: Zinc finger
C-x8-C-x5-C-x3-H type, putative - Plasmodium yoelii
yoelii
Length = 349
Score = 33.5 bits (73), Expect = 4.5
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 432 ILQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVNEHHXDTYI----XRSPGEKQNDRN 599
I+ + + KH NT F LL+ NK+ F++E++ + + S +K+ND +
Sbjct: 219 IIDLIKVDFKHGNTKYFYDLLNNYKNKENNLNIFLSENNANDLVNNMGENSVSQKENDNS 278
Query: 600 DRSIRKATS 626
D K T+
Sbjct: 279 DIKKNKNTN 287
>UniRef50_Q554N6 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 331
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/68 (20%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 408 EDALTNVII-LQTVLEEVKHQNTAVFXRLLDIISNKKRKFYSFVNEHHXDTYIXRSPGEK 584
+D L N+I+ ++ ++E + + +F ++LD+ +NKK+ N+++ + +
Sbjct: 184 QDLLNNIIVVMKPIIENIIKISQQLFTQILDLATNKKQPSPGIPNQNYSNNNTNNNNNNN 243
Query: 585 QNDRNDRS 608
N N+ +
Sbjct: 244 TNTNNNNN 251
>UniRef50_Q8WTU9 Cluster: DIS3 mitotic control homolog (S.
cerevisiae)-like; n=15; Eutheria|Rep: DIS3 mitotic
control homolog (S. cerevisiae)-like - Homo sapiens
(Human)
Length = 971
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 435 LQTVLEEVKHQN-TAVFXRLLDIISNKKRKFYSFVNEHHXDTYIXRSPGEKQNDRNDRSI 611
+QT + V+HQ + +L +++ + + F NE Y+ R GE RSI
Sbjct: 1 MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI 60
Query: 612 RKATSW 629
A W
Sbjct: 61 YNAAVW 66
>UniRef50_Q4T2G0 Cluster: Chromosome undetermined SCAF10273, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10273,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 104
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 174 TTKTFLTKTKRGNILKIVREHYLRDDLLCGSAAC 275
T K ++ RG +++VREHYLR + C S C
Sbjct: 4 TDKILHLRSSRGRKVRVVREHYLRARVPCHSCLC 37
>UniRef50_Q54MQ8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 767
Score = 33.1 bits (72), Expect = 6.0
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Frame = +3
Query: 342 FDFPHYLXLDTNV----VLHQIXVLEEDALT--NVIILQTVLEEVKHQNTAVFXRLLDII 503
FD+ Y L N + + E LT NVI L+ ++ E +Q T + L+D I
Sbjct: 51 FDYEFYKNLFKNYPNDFLFSKDSTAENKILTFENVIALKVLINEFNYQPTPSY--LIDSI 108
Query: 504 SNKKRKFYSFVNEHH 548
N K K ++NE+H
Sbjct: 109 KNSKFKISDYLNENH 123
>UniRef50_Q3E910 Cluster: Uncharacterized protein At5g27500.1; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At5g27500.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 187
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = -2
Query: 214 MLPRLVLVRKVFVVHISSVLKQASTDRLILVSKIKI 107
+L LVL VFVV +S+V+ A T+R +++++++I
Sbjct: 143 VLASLVLASSVFVVRVSAVVAYAMTERPVILARLEI 178
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,143,180
Number of Sequences: 1657284
Number of extensions: 10793019
Number of successful extensions: 24777
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 24008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24748
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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