Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_L02
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   8.7  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 198 TKRGNILKIVREHYLRDDLL 257
           TK G + ++V   YL+ DL+
Sbjct: 189 TKLGELAQVVELEYLKTDLI 208


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +3

Query: 258 CGSAACNTCPHKDDELVLETSPKSPCAL 341
           CGS      P +DD   L  S  SP AL
Sbjct: 660 CGSMGDAHTPPEDDAESLNQSISSPGAL 687


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +3

Query: 258 CGSAACNTCPHKDDELVLETSPKSPCAL 341
           CGS      P +DD   L  S  SP AL
Sbjct: 552 CGSMGDAHTPPEDDAESLNQSISSPGAL 579


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory
          receptor candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 29 RTKTHIFTF*YTRTYNILSFSL 94
          R + H F   Y  TYNI++ SL
Sbjct: 33 RQERHSFYKIYKYTYNIVAVSL 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,635
Number of Sequences: 336
Number of extensions: 3204
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)