Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L02
(647 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC056143-1|AAH56143.1| 958|Homo sapiens DIS3 mitotic control ho... 175 1e-43
AL391384-1|CAI15670.1| 958|Homo sapiens DIS3 mitotic control ho... 175 1e-43
AL138695-1|CAH72709.1| 958|Homo sapiens DIS3 mitotic control ho... 175 1e-43
AF330044-1|AAL37479.1| 958|Homo sapiens KIAA1008 protein protein. 175 1e-43
AB023225-1|BAA76852.2| 935|Homo sapiens KIAA1008 protein protein. 83 6e-16
AL391384-2|CAI15671.1| 928|Homo sapiens DIS3 mitotic control ho... 83 8e-16
AL138695-2|CAH72708.1| 928|Homo sapiens DIS3 mitotic control ho... 83 8e-16
AK095407-1|BAC04542.1| 750|Homo sapiens protein ( Homo sapiens ... 69 1e-11
BC022089-1|AAH22089.1| 971|Homo sapiens DIS3 mitotic control ho... 33 0.66
AL136233-1|CAI17232.1| 196|Homo sapiens RUN and FYVE domain con... 31 2.7
AF461266-1|AAL67520.1| 606|Homo sapiens RUFY2 protein. 31 2.7
AF411980-1|AAL04164.1| 590|Homo sapiens Run- and FYVE-domain co... 31 2.7
AB040970-1|BAA96061.1| 619|Homo sapiens KIAA1537 protein protein. 31 2.7
CR542062-1|CAG46859.1| 373|Homo sapiens PEX3 protein. 31 4.7
BC015506-1|AAH15506.1| 373|Homo sapiens peroxisomal biogenesis ... 31 4.7
BC014551-1|AAH14551.1| 373|Homo sapiens peroxisomal biogenesis ... 31 4.7
AY277600-1|AAQ18039.1| 373|Homo sapiens transformation-related ... 31 4.7
AL031320-5|CAB53744.1| 373|Homo sapiens peroxisomal biogenesis ... 31 4.7
AJ131389-1|CAA10362.1| 373|Homo sapiens PEX3 protein protein. 31 4.7
AJ009866-1|CAA08904.1| 373|Homo sapiens Pex3p protein. 31 4.7
AJ001625-1|CAA04879.1| 373|Homo sapiens Pex3 protein protein. 31 4.7
AB035307-1|BAA97993.1| 373|Homo sapiens Pex3p protein. 31 4.7
BC032571-1|AAH32571.1| 600|Homo sapiens RUN and FYVE domain con... 30 8.2
AK025904-1|BAB15276.1| 310|Homo sapiens protein ( Homo sapiens ... 30 8.2
AF361055-1|AAK50771.1| 600|Homo sapiens RUFY1 protein. 30 8.2
AF312367-1|AAQ14554.1| 708|Homo sapiens La binding protein 1 pr... 30 8.2
>BC056143-1|AAH56143.1| 958|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae) protein.
Length = 958
Score = 175 bits (426), Expect = 1e-43
Identities = 78/155 (50%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCA-LF 344
M +KTFL KT+ G ++KIVREHYLRDD+ CG+ C C + LE P+ P + +
Sbjct: 1 MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVC 60
Query: 345 DFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKF 524
PHYL DTNV+LHQI VLE+ A+ NVI+LQTVL+EV++++ V+ R+ D+ +N+++ F
Sbjct: 61 PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHF 120
Query: 525 YSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
Y+F NEHH +TY+ + GE NDRNDR+IR A W
Sbjct: 121 YTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKW 155
>AL391384-1|CAI15670.1| 958|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae) protein.
Length = 958
Score = 175 bits (426), Expect = 1e-43
Identities = 78/155 (50%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCA-LF 344
M +KTFL KT+ G ++KIVREHYLRDD+ CG+ C C + LE P+ P + +
Sbjct: 1 MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVC 60
Query: 345 DFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKF 524
PHYL DTNV+LHQI VLE+ A+ NVI+LQTVL+EV++++ V+ R+ D+ +N+++ F
Sbjct: 61 PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHF 120
Query: 525 YSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
Y+F NEHH +TY+ + GE NDRNDR+IR A W
Sbjct: 121 YTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKW 155
>AL138695-1|CAH72709.1| 958|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae) protein.
Length = 958
Score = 175 bits (426), Expect = 1e-43
Identities = 78/155 (50%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCA-LF 344
M +KTFL KT+ G ++KIVREHYLRDD+ CG+ C C + LE P+ P + +
Sbjct: 1 MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVC 60
Query: 345 DFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKF 524
PHYL DTNV+LHQI VLE+ A+ NVI+LQTVL+EV++++ V+ R+ D+ +N+++ F
Sbjct: 61 PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHF 120
Query: 525 YSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
Y+F NEHH +TY+ + GE NDRNDR+IR A W
Sbjct: 121 YTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKW 155
>AF330044-1|AAL37479.1| 958|Homo sapiens KIAA1008 protein protein.
Length = 958
Score = 175 bits (426), Expect = 1e-43
Identities = 78/155 (50%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCA-LF 344
M +KTFL KT+ G ++KIVREHYLRDD+ CG+ C C + LE P+ P + +
Sbjct: 1 MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVC 60
Query: 345 DFPHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDIISNKKRKF 524
PHYL DTNV+LHQI VLE+ A+ NVI+LQTVL+EV++++ V+ R+ D+ +N+++ F
Sbjct: 61 PQPHYLLPDTNVLLHQIDVLEDPAIRNVIVLQTVLQEVRNRSAPVYKRIRDVTNNQEKHF 120
Query: 525 YSFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
Y+F NEHH +TY+ + GE NDRNDR+IR A W
Sbjct: 121 YTFTNEHHRETYVEQEQGENANDRNDRAIRVAAKW 155
>AB023225-1|BAA76852.2| 935|Homo sapiens KIAA1008 protein protein.
Length = 935
Score = 83.4 bits (197), Expect = 6e-16
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +3
Query: 165 EMWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPC-AL 341
+M +KTFL KT+ G ++KIVREHYLRDD+ CG+ C C + LE P+ P ++
Sbjct: 7 KMLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSV 66
Query: 342 FDFPHYLXLDTNVVLHQI 395
PHYL DTNV+LHQI
Sbjct: 67 CPQPHYLLPDTNVLLHQI 84
Score = 37.5 bits (83), Expect = 0.041
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 552 DTYIXRSPGEKQNDRNDRSIRKATSW 629
+TY+ + GE NDRNDR+IR A W
Sbjct: 107 ETYVEQEQGENANDRNDRAIRVAAKW 132
>AL391384-2|CAI15671.1| 928|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae) protein.
Length = 928
Score = 83.0 bits (196), Expect = 8e-16
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPC-ALF 344
M +KTFL KT+ G ++KIVREHYLRDD+ CG+ C C + LE P+ P ++
Sbjct: 1 MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVC 60
Query: 345 DFPHYLXLDTNVVLHQI 395
PHYL DTNV+LHQI
Sbjct: 61 PQPHYLLPDTNVLLHQI 77
Score = 37.5 bits (83), Expect = 0.041
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 552 DTYIXRSPGEKQNDRNDRSIRKATSW 629
+TY+ + GE NDRNDR+IR A W
Sbjct: 100 ETYVEQEQGENANDRNDRAIRVAAKW 125
>AL138695-2|CAH72708.1| 928|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae) protein.
Length = 928
Score = 83.0 bits (196), Expect = 8e-16
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +3
Query: 168 MWTTKTFLTKTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPC-ALF 344
M +KTFL KT+ G ++KIVREHYLRDD+ CG+ C C + LE P+ P ++
Sbjct: 1 MLKSKTFLKKTRAGGVMKIVREHYLRDDIGCGAPGCAACGGAHEGPALEPQPQDPASSVC 60
Query: 345 DFPHYLXLDTNVVLHQI 395
PHYL DTNV+LHQI
Sbjct: 61 PQPHYLLPDTNVLLHQI 77
Score = 37.5 bits (83), Expect = 0.041
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 552 DTYIXRSPGEKQNDRNDRSIRKATSW 629
+TY+ + GE NDRNDR+IR A W
Sbjct: 100 ETYVEQEQGENANDRNDRAIRVAAKW 125
>AK095407-1|BAC04542.1| 750|Homo sapiens protein ( Homo sapiens
cDNA FLJ38088 fis, clone CTONG2020031, weakly similar to
Mitotic control protein dis3. ).
Length = 750
Score = 68.9 bits (161), Expect = 1e-11
Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Frame = +3
Query: 180 KTFLTKTKRGNILKIVREHYLRDDLLCGSAAC---NTCPHKDDELVLETSPKSPCALFDF 350
K L +T +G L+IVREHYLR + C S C C H D +L+ D
Sbjct: 7 KVLLLRTFQGRTLRIVREHYLRPCVPCHSPLCPQPAACSH-DGKLLSS----------DV 55
Query: 351 PHYLXLDTNVVLHQIXVLEEDALTNVIILQTVLEEVKHQ-NTAVFXRLLDIISNKKRKFY 527
HY+ D VV + +LE L +I +QT + V+HQ + +L +++ + +
Sbjct: 56 THYVIPDWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCI 115
Query: 528 SFVNEHHXDTYIXRSPGEKQNDRNDRSIRKATSW 629
F NE Y+ R GE RSI A W
Sbjct: 116 LFANEFQQCCYLPRERGESMEKWQTRSIYNAAVW 149
>BC022089-1|AAH22089.1| 971|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae)-like protein.
Length = 971
Score = 33.5 bits (73), Expect = 0.66
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +3
Query: 435 LQTVLEEVKHQN-TAVFXRLLDIISNKKRKFYSFVNEHHXDTYIXRSPGEKQNDRNDRSI 611
+QT + V+HQ + +L +++ + + F NE Y+ R GE RSI
Sbjct: 1 MQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSI 60
Query: 612 RKATSW 629
A W
Sbjct: 61 YNAAVW 66
>AL136233-1|CAI17232.1| 196|Homo sapiens RUN and FYVE domain
containing 2 protein.
Length = 196
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 228 REHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL 368
R+H+ R+ CG CN C D+EL L +SPK P + D H L +
Sbjct: 148 RKHHCRN---CGEIFCNAC--SDNELPLPSSPK-PVRVCDSCHALLI 188
>AF461266-1|AAL67520.1| 606|Homo sapiens RUFY2 protein.
Length = 606
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 228 REHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL 368
R+H+ R+ CG CN C D+EL L +SPK P + D H L +
Sbjct: 558 RKHHCRN---CGEIFCNAC--SDNELPLPSSPK-PVRVCDSCHALLI 598
>AF411980-1|AAL04164.1| 590|Homo sapiens Run- and FYVE-domain
containing protein Rabip4R protein.
Length = 590
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 228 REHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL 368
R+H+ R+ CG CN C D+EL L +SPK P + D H L +
Sbjct: 542 RKHHCRN---CGEIFCNAC--SDNELPLPSSPK-PVRVCDSCHALLI 582
>AB040970-1|BAA96061.1| 619|Homo sapiens KIAA1537 protein protein.
Length = 619
Score = 31.5 bits (68), Expect = 2.7
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 228 REHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL 368
R+H+ R+ CG CN C D+EL L +SPK P + D H L +
Sbjct: 571 RKHHCRN---CGEIFCNAC--SDNELPLPSSPK-PVRVCDSCHALLI 611
>CR542062-1|CAG46859.1| 373|Homo sapiens PEX3 protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>BC015506-1|AAH15506.1| 373|Homo sapiens peroxisomal biogenesis
factor 3 protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>BC014551-1|AAH14551.1| 373|Homo sapiens peroxisomal biogenesis
factor 3 protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>AY277600-1|AAQ18039.1| 373|Homo sapiens transformation-related
protein 18 protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>AL031320-5|CAB53744.1| 373|Homo sapiens peroxisomal biogenesis
factor 3 protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>AJ131389-1|CAA10362.1| 373|Homo sapiens PEX3 protein protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>AJ009866-1|CAA08904.1| 373|Homo sapiens Pex3p protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>AJ001625-1|CAA04879.1| 373|Homo sapiens Pex3 protein protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>AB035307-1|BAA97993.1| 373|Homo sapiens Pex3p protein.
Length = 373
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/55 (27%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 HNKSSRK*CSLTIFNMLPRL--VLVRKVFVVHISSVLKQASTDRLILVSKIKIYS 101
H +S+++ C++T+ +MLP L L++++ ++++LK +++L + +KI S
Sbjct: 57 HFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIIS 111
>BC032571-1|AAH32571.1| 600|Homo sapiens RUN and FYVE domain
containing 1 protein.
Length = 600
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 228 REHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL 368
R+H+ R+ CG CNTC +EL L + PK P + D H L L
Sbjct: 552 RKHHCRN---CGHIFCNTC--SSNELALPSYPK-PVRVCDSCHTLLL 592
>AK025904-1|BAB15276.1| 310|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22251 fis, clone HRC02686. ).
Length = 310
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 228 REHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL 368
R+H+ R+ CG CNTC +EL L + PK P + D H L L
Sbjct: 262 RKHHCRN---CGHIFCNTC--SSNELALPSYPK-PVRVCDSCHTLLL 302
>AF361055-1|AAK50771.1| 600|Homo sapiens RUFY1 protein.
Length = 600
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 228 REHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL 368
R+H+ R+ CG CNTC +EL L + PK P + D H L L
Sbjct: 552 RKHHCRN---CGHIFCNTC--SSNELALPSYPK-PVRVCDSCHTLLL 592
>AF312367-1|AAQ14554.1| 708|Homo sapiens La binding protein 1
protein.
Length = 708
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3
Query: 228 REHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXL 368
R+H+ R+ CG CNTC +EL L + PK P + D H L L
Sbjct: 660 RKHHCRN---CGHIFCNTC--SSNELALPSYPK-PVRVCDSCHTLLL 700
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,777,748
Number of Sequences: 237096
Number of extensions: 1670476
Number of successful extensions: 3058
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3049
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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