Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_L02
         (647 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr...    60   2e-09
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.       30   1.2  
U22831-9|AAN63388.1|  412|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U22831-8|AAK20070.2|  545|Caenorhabditis elegans Hypothetical pr...    29   2.8  

>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
           protein C04G2.6 protein.
          Length = 1029

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
 Frame = +3

Query: 195 KTKRGNILKIVREHYLRDDLLCGSAACNTCPHKDDELVLETSPKSPCALFDFPHYLXLDT 374
           + + G + K   E YLR+DL CG A C TC       +L+       A     H L +D+
Sbjct: 21  QNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDFGTNPLLKIENPVRNAKVG-RHALIVDS 79

Query: 375 NVVLHQIXVLEEDALTNVIILQTVLEEVKHQNTAVFXRLLDI-ISNKKRKFYSFVNEHHX 551
             ++    + +   L ++I+ QTV E VK +    + ++  +   + K +F+ F+NE H 
Sbjct: 80  TSLIRFYDLFDSSLLRDLIVTQTVWEGVKAKAVPAYKKMNSLCYEDAKDRFHVFMNEFHC 139

Query: 552 DTYIXRSPGE 581
           +T+   S  E
Sbjct: 140 ETFSESSKFE 149


>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
            T10G3.5b protein.
          Length = 1203

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +3

Query: 126  NISLSVEACFNTDEMWTTKT-FLTKTKRGNILKI-VREHYLRDDLLCGSAACNTCPHKDD 299
            N SL ++A   +   W      +  T+ G +  + VR+H+ R   +CG   CN C  K  
Sbjct: 1126 NQSLQIDADRYSSRKWLDDAEAINCTECGKVFSLTVRKHHCR---VCGKIYCNPCSSKSV 1182

Query: 300  ELVLETSPKSPC 335
             +    +P   C
Sbjct: 1183 RIASAKNPVRAC 1194


>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
            T10G3.5a protein.
          Length = 1205

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +3

Query: 126  NISLSVEACFNTDEMWTTKT-FLTKTKRGNILKI-VREHYLRDDLLCGSAACNTCPHKDD 299
            N SL ++A   +   W      +  T+ G +  + VR+H+ R   +CG   CN C  K  
Sbjct: 1128 NQSLQIDADRYSSRKWLDDAEAINCTECGKVFSLTVRKHHCR---VCGKIYCNPCSSKSV 1184

Query: 300  ELVLETSPKSPC 335
             +    +P   C
Sbjct: 1185 RIASAKNPVRAC 1196


>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
          Length = 1205

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = +3

Query: 126  NISLSVEACFNTDEMWTTKT-FLTKTKRGNILKI-VREHYLRDDLLCGSAACNTCPHKDD 299
            N SL ++A   +   W      +  T+ G +  + VR+H+ R   +CG   CN C  K  
Sbjct: 1128 NQSLQIDADRYSSRKWLDDAEAINCTECGKVFSLTVRKHHCR---VCGKIYCNPCSSKSV 1184

Query: 300  ELVLETSPKSPC 335
             +    +P   C
Sbjct: 1185 RIASAKNPVRAC 1196


>U22831-9|AAN63388.1|  412|Caenorhabditis elegans Hypothetical
           protein F47D12.9b protein.
          Length = 412

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +3

Query: 120 ETNISLSVEACFNTDEMWTTKTFLTKTKRGNIL 218
           + +I   +E+CF  + + T ++FL  +++ N+L
Sbjct: 213 QMSIGFGLESCFRVENLLTDRSFLMSSRKRNVL 245


>U22831-8|AAK20070.2|  545|Caenorhabditis elegans Hypothetical
           protein F47D12.9a protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = +3

Query: 120 ETNISLSVEACFNTDEMWTTKTFLTKTKRGNIL 218
           + +I   +E+CF  + + T ++FL  +++ N+L
Sbjct: 346 QMSIGFGLESCFRVENLLTDRSFLMSSRKRNVL 378


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,935,265
Number of Sequences: 27780
Number of extensions: 282214
Number of successful extensions: 666
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)