Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L01
(626 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 206 4e-53
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 206 4e-53
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 206 4e-53
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 206 4e-53
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 206 4e-53
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 206 4e-53
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 206 4e-53
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 206 4e-53
D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protei... 78 2e-14
CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein. 78 2e-14
BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting... 78 2e-14
BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting... 78 2e-14
BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting... 78 2e-14
AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transportin... 78 2e-14
D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain pro... 33 0.63
BC146754-1|AAI46755.1| 926|Homo sapiens storkhead box 2 protein. 31 2.5
AB037813-1|BAA92630.1| 950|Homo sapiens KIAA1392 protein protein. 31 2.5
BC052973-1|AAH52973.1| 1187|Homo sapiens PCDH12 protein protein. 30 5.8
BC042634-1|AAH42634.1| 1187|Homo sapiens PCDH12 protein protein. 30 5.8
AY358428-1|AAQ88794.1| 1184|Homo sapiens PCDH12 protein. 30 5.8
AK024140-1|BAB14837.1| 1187|Homo sapiens protein ( Homo sapiens ... 30 5.8
AK023785-1|BAB14677.1| 808|Homo sapiens protein ( Homo sapiens ... 30 5.8
AF240635-1|AAF73962.1| 1184|Homo sapiens vascular endothelial ca... 30 5.8
AF231025-1|AAF61931.1| 1184|Homo sapiens protocadherin 12 protein. 30 5.8
AB026893-1|BAA95162.1| 1184|Homo sapiens vascular cadherin-2 pro... 30 5.8
AB046575-1|BAC06442.1| 26|Homo sapiens V-ATPase subunit c prot... 30 7.7
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 206 bits (504), Expect = 4e-53
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 266
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 267 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGT 446
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGL VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 447 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 539
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 206 bits (504), Expect = 4e-53
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 266
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 267 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGT 446
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGL VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 447 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 539
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 206 bits (504), Expect = 4e-53
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 266
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 267 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGT 446
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGL VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 447 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 539
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 206 bits (504), Expect = 4e-53
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 266
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 267 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGT 446
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGL VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 447 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 539
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 206 bits (504), Expect = 4e-53
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 266
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 267 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGT 446
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGL VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 447 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 539
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 206 bits (504), Expect = 4e-53
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 266
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 267 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGT 446
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGL VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 447 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 539
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 206 bits (504), Expect = 4e-53
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 266
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 267 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGT 446
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGL VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 447 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 539
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 206 bits (504), Expect = 4e-53
Identities = 108/151 (71%), Positives = 121/151 (80%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 266
+++ P Y FF VMGA++A++FSALGAAYGTAKSGTGIAAMSVMRPE IMKSIIPVVMAG
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAG 63
Query: 267 IIAIYGLVVAVLIAGALQEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGT 446
IIAIYGLVVAVLIA +L + + LYK F+ LGAGL+VG SGL VRGT
Sbjct: 64 IIAIYGLVVAVLIANSLND--DISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGT 121
Query: 447 AQQPXLFVGMILILIFAEVLGLYGLIVAIYL 539
AQQP LFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 122 AQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protein
protein.
Length = 205
Score = 78.2 bits (184), Expect = 2e-14
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Frame = +3
Query: 126 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 305
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 306 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQP 458
+ + EP A P + G+ GAGL VG S L AQ P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 459 XLFVGMILILIFAEVLGLYGLIVAI 533
LFV ++++ IF +GL+G+IVAI
Sbjct: 171 SLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 33.9 bits (74), Expect = 0.47
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 357 HLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 536
+LG GLA+ S + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 537 L 539
+
Sbjct: 111 I 111
>CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein.
Length = 205
Score = 78.2 bits (184), Expect = 2e-14
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Frame = +3
Query: 126 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 305
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 306 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQP 458
+ + EP A P + G+ GAGL VG S L AQ P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 459 XLFVGMILILIFAEVLGLYGLIVAI 533
LFV ++++ IF +GL+G+IVAI
Sbjct: 171 SLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 33.9 bits (74), Expect = 0.47
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 357 HLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 536
+LG GLA+ S + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 537 L 539
+
Sbjct: 111 I 111
>BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit c'' protein.
Length = 205
Score = 78.2 bits (184), Expect = 2e-14
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Frame = +3
Query: 126 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 305
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 306 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQP 458
+ + EP A P + G+ GAGL VG S L AQ P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 459 XLFVGMILILIFAEVLGLYGLIVAI 533
LFV ++++ IF +GL+G+IVAI
Sbjct: 171 SLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 33.9 bits (74), Expect = 0.47
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 357 HLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 536
+LG GLA+ S + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 537 L 539
+
Sbjct: 111 I 111
>BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 78.2 bits (184), Expect = 2e-14
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Frame = +3
Query: 126 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 305
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 306 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQP 458
+ + EP A P + G+ GAGL VG S L AQ P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 459 XLFVGMILILIFAEVLGLYGLIVAI 533
LFV ++++ IF +GL+G+IVAI
Sbjct: 171 SLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 33.9 bits (74), Expect = 0.47
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 357 HLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 536
+LG GLA+ S + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 537 L 539
+
Sbjct: 111 I 111
>BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 78.2 bits (184), Expect = 2e-14
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Frame = +3
Query: 126 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 305
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 306 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQP 458
+ + EP A P + G+ GAGL VG S L AQ P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 459 XLFVGMILILIFAEVLGLYGLIVAI 533
LFV ++++ IF +GL+G+IVAI
Sbjct: 171 SLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 33.9 bits (74), Expect = 0.47
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 357 HLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 536
+LG GLA+ S + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 537 L 539
+
Sbjct: 111 I 111
>AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 78.2 bits (184), Expect = 2e-14
Identities = 47/145 (32%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Frame = +3
Query: 126 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 305
+G AI S +GAA+G +G+ I V P + K+++ ++ +AIYG+++A++I
Sbjct: 52 LGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Query: 306 AGALQEP--ANYP-------LYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQP 458
+ + EP A P + G+ GAGL VG S L AQ P
Sbjct: 112 SN-MAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNP 170
Query: 459 XLFVGMILILIFAEVLGLYGLIVAI 533
LFV ++++ IF +GL+G+IVAI
Sbjct: 171 SLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 33.9 bits (74), Expect = 0.47
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 357 HLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPXLFVGMILILIFAEVLGLYGLIVAIY 536
+LG GLA+ S + + G + P + ++ +IF E + +YG+I+AI
Sbjct: 51 NLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIV 110
Query: 537 L 539
+
Sbjct: 111 I 111
>D37766-1|BAA22263.1| 1172|Homo sapiens Laminin-5 beta3 chain
protein.
Length = 1172
Score = 33.5 bits (73), Expect = 0.63
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 266 YYCHLRSGRGCPDCWCPPGASQLPPLQRVH 355
Y+ L SG+GC C C P S P +Q VH
Sbjct: 468 YHWKLASGQGCEPCACDPHNSPQPTVQPVH 497
>BC146754-1|AAI46755.1| 926|Homo sapiens storkhead box 2 protein.
Length = 926
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +2
Query: 245 HSCRHGGYYCHL-----RSGRGCPDCWCPPGASQLPPLQR 349
H CR + H +S + C D +CPP Q+PP ++
Sbjct: 200 HCCREDVHSTHAPTLQRKSAKDCKDPYCPPSLCQVPPTEK 239
>AB037813-1|BAA92630.1| 950|Homo sapiens KIAA1392 protein protein.
Length = 950
Score = 31.5 bits (68), Expect = 2.5
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +2
Query: 245 HSCRHGGYYCHL-----RSGRGCPDCWCPPGASQLPPLQR 349
H CR + H +S + C D +CPP Q+PP ++
Sbjct: 224 HCCREDVHSTHAPTLQRKSAKDCKDPYCPPSLCQVPPTEK 263
>BC052973-1|AAH52973.1| 1187|Homo sapiens PCDH12 protein protein.
Length = 1187
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 VRGTAQQP-XLFVGMILILIFAEVLGLYGLIVAIYL 539
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>BC042634-1|AAH42634.1| 1187|Homo sapiens PCDH12 protein protein.
Length = 1187
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 VRGTAQQP-XLFVGMILILIFAEVLGLYGLIVAIYL 539
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AY358428-1|AAQ88794.1| 1184|Homo sapiens PCDH12 protein.
Length = 1184
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 VRGTAQQP-XLFVGMILILIFAEVLGLYGLIVAIYL 539
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AK024140-1|BAB14837.1| 1187|Homo sapiens protein ( Homo sapiens
cDNA FLJ14078 fis, clone HEMBB1002044, moderately
similar to Mus musculus mRNA for vascular cadherin-2. ).
Length = 1187
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 VRGTAQQP-XLFVGMILILIFAEVLGLYGLIVAIYL 539
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AK023785-1|BAB14677.1| 808|Homo sapiens protein ( Homo sapiens
cDNA FLJ13723 fis, clone PLACE2000458, weakly similar to
CADHERIN-RELATED TUMOR SUPPRESSOR PRECURSOR. ).
Length = 808
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 VRGTAQQP-XLFVGMILILIFAEVLGLYGLIVAIYL 539
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 326 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 361
>AF240635-1|AAF73962.1| 1184|Homo sapiens vascular endothelial
cadherin 2 protein.
Length = 1184
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 VRGTAQQP-XLFVGMILILIFAEVLGLYGLIVAIYL 539
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AF231025-1|AAF61931.1| 1184|Homo sapiens protocadherin 12 protein.
Length = 1184
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 VRGTAQQP-XLFVGMILILIFAEVLGLYGLIVAIYL 539
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AB026893-1|BAA95162.1| 1184|Homo sapiens vascular cadherin-2
protein.
Length = 1184
Score = 30.3 bits (65), Expect = 5.8
Identities = 12/36 (33%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = +3
Query: 435 VRGTAQQP-XLFVGMILILIFAEVLGLYGLIVAIYL 539
+R +A++P L + M+ ++ A +LG++GLI+A+++
Sbjct: 702 LRDSARKPGALSMSMLTVICLAVLLGIFGLILALFM 737
>AB046575-1|BAC06442.1| 26|Homo sapiens V-ATPase subunit c
protein.
Length = 26
Score = 29.9 bits (64), Expect = 7.7
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 87 AENNPIYGPFFGVMGAASAIIFS 155
+++ P Y FF VMGA++A++FS
Sbjct: 4 SKSGPEYASFFAVMGASAAMVFS 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,684,830
Number of Sequences: 237096
Number of extensions: 2285305
Number of successful extensions: 5841
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5825
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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