Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_L01
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 186 1e-47
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 186 1e-47
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 186 1e-47
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 186 1e-47
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 172 2e-43
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 172 2e-43
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 68 6e-12
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 68 6e-12
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.13
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 32 0.29
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 32 0.29
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 3.6
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.6
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 3.6
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 3.6
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 3.6
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 28 4.8
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 28 4.8
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 4.8
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical pr... 28 6.3
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 28 6.3
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 27 8.3
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 186 bits (453), Expect = 1e-47
Identities = 96/146 (65%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Frame = +3
Query: 105 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 284
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 285 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPX 461
LVVA+++ G + A Y L KGF HL AGL G GL VRGTAQQP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 462 LFVGMILILIFAEVLGLYGLIVAIYL 539
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 186 bits (453), Expect = 1e-47
Identities = 96/146 (65%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Frame = +3
Query: 105 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 284
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 285 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPX 461
LVVA+++ G + A Y L KGF HL AGL G GL VRGTAQQP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 462 LFVGMILILIFAEVLGLYGLIVAIYL 539
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 186 bits (453), Expect = 1e-47
Identities = 96/146 (65%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Frame = +3
Query: 105 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 284
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 285 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPX 461
LVVA+++ G + A Y L KGF HL AGL G GL VRGTAQQP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 462 LFVGMILILIFAEVLGLYGLIVAIYL 539
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 186 bits (453), Expect = 1e-47
Identities = 96/146 (65%), Positives = 107/146 (73%), Gaps = 1/146 (0%)
Frame = +3
Query: 105 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 284
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 285 LVVAVLIAGAL-QEPANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQPX 461
LVVA+++ G + A Y L KGF HL AGL G GL VRGTAQQP
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPR 132
Query: 462 LFVGMILILIFAEVLGLYGLIVAIYL 539
LFVGMILILIF+EVLGLYG+IVA+ L
Sbjct: 133 LFVGMILILIFSEVLGLYGMIVALIL 158
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 172 bits (419), Expect = 2e-43
Identities = 85/147 (57%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +3
Query: 102 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 281
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 282 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQP 458
GLVVAV+++G ++ ANY + F GL G GL VR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 459 XLFVGMILILIFAEVLGLYGLIVAIYL 539
+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 172 bits (419), Expect = 2e-43
Identities = 85/147 (57%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = +3
Query: 102 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 281
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 282 GLVVAVLIAGALQEP-ANYPLYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRGTAQQP 458
GLVVAV+++G ++ ANY + F GL G GL VR +QQP
Sbjct: 80 GLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQP 139
Query: 459 XLFVGMILILIFAEVLGLYGLIVAIYL 539
+FVGMILILIFAEVLGLYG+IVA+ L
Sbjct: 140 RMFVGMILILIFAEVLGLYGMIVALIL 166
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 67.7 bits (158), Expect = 6e-12
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Frame = +3
Query: 126 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 305
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 306 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRG 443
G L E + P L G++ G GL VG S L
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 444 TAQQPXLFVGMILILIFAEVLGLYGLIVAI 533
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 67.7 bits (158), Expect = 6e-12
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Frame = +3
Query: 126 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 305
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 306 AGALQE--PANYP------------LYKGFIHLGAGLAVGFSGLXXXXXXXXXXXXRVRG 443
G L E + P L G++ G GL VG S L
Sbjct: 114 VGKLAEFRREDLPDTEDGMAILARNLASGYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIA 173
Query: 444 TAQQPXLFVGMILILIFAEVLGLYGLIVAI 533
A P LFV +++I IFA +GL+G+I+ I
Sbjct: 174 DAANPALFVKILIIEIFASAIGLFGMIIGI 203
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 239 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 322
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 338 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 240
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 338 GVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 240
GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 12 GVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 539 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLLSSTTHACXSHDAYGETGSQTRE 384
++DG++ K + K KNH+D E LL ST+ + + D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 269 YCHLRSGRGCPDCWCPPGASQ 331
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 437 HACXSHDAYGETGSQTRESYSQTSTQVDE-PFVKGVVGWLLEGTSNQDSHDQTVDGNNTR 261
H S + + S++R+ ++ T+ D+ P +K V E S+ DS + D R
Sbjct: 11 HRDRSPERRRRSRSRSRDRQTRRDTRRDDSPKIKREVKE--EQFSDNDSPRRRRDDRGGR 68
Query: 260 HDDRNDRLHDQLRPH 216
DDR D D R H
Sbjct: 69 RDDRRDNRRDDRRDH 83
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 251 CRHGGYYCHLRSGRGCPDCWCPPGASQ 331
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 269 YCHLRSGRGCPDCWCPPGASQ 331
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 269 YCHLRSGRGCPDCWCPPGASQ 331
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 539 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLLSSTTHACXSHDAYGE 405
++DG++ K + K KNH+D E LL ST+ + + D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 539 QVDGDDKSVKTQYFSENKNKNHSD---E*XRLLSSTTHACXSHDAYGE 405
++DG++ K + K KNH+D E LL ST+ + + D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 219 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 344
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +2
Query: 272 CHLRSGR-GCPDCWCPPGASQLPP 340
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 251 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 376
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>Z29117-7|CAA82379.1| 159|Caenorhabditis elegans Hypothetical
protein C48B4.7 protein.
Length = 159
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 5/36 (13%)
Frame = +3
Query: 450 QQPXLFVGMILILI-----FAEVLGLYGLIVAIYLY 542
Q+ +FV M+L+L+ F LG YG ++AI+ Y
Sbjct: 48 QEEIVFVAMVLLLVFTISSFVAFLGEYGTMMAIHYY 83
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 251 CRHGGYYCHLRSGRGCPDCWCPPG-ASQLPPLQRVHPLGCWFG 376
C++GGY + C +C CPPG QL + + GC G
Sbjct: 331 CQNGGYI----NPNDCNNCKCPPGFGGQLCDVAGTNSNGCGAG 369
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Frame = +1
Query: 46 FGTCKYSHI*QTKWLKIIQS-------TDPSLELWGRRLLSSSAPWELPMELPSQE 192
F TC + + T + +QS ++ W R +L +PW L M++P +E
Sbjct: 293 FHTCNFISVLATSFTVYVQSFHFRNQHVHERMDFWMRFILLEWSPWLLRMKMPDRE 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,909,128
Number of Sequences: 27780
Number of extensions: 327085
Number of successful extensions: 1041
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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