Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K24
         (583 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   3.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   5.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   5.8  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
 Frame = -1

Query: 406 TFSTLANSCTS----RNSTSFNIKVHTLSQNLYVLSF 308
           TFST ANSC S     N   +N+     + ++ + +F
Sbjct: 381 TFSTTANSCRSSTFRNNRDEYNVCFRPRNNSILIKNF 417


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 78  VCFNTRKSNKVNES 37
           VCF  + SN++NE+
Sbjct: 407 VCFRLKASNEINEA 420


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 519 IVVIFCHCIWDLITK 563
           I+ I C CIW +  K
Sbjct: 49  IITIGCLCIWSIFNK 63


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 315 NTYRFCDNV 341
           N+Y+FCDN+
Sbjct: 204 NSYQFCDNL 212


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 315 NTYRFCDNV 341
           N+Y+FCDN+
Sbjct: 195 NSYQFCDNL 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,931
Number of Sequences: 336
Number of extensions: 2305
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)