Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K24
(583 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81713-1|CAA57357.1| 109|Homo sapiens smallest subunit of TFIIA... 153 3e-37
U21242-1|AAB58247.1| 109|Homo sapiens transcription factor TFII... 153 3e-37
U14193-1|AAA64951.1| 109|Homo sapiens transcription factor IIA ... 153 3e-37
CR542192-1|CAG46989.1| 109|Homo sapiens GTF2A2 protein. 153 3e-37
BT007362-1|AAP36026.1| 109|Homo sapiens general transcription f... 153 3e-37
BC001919-1|AAH01919.1| 109|Homo sapiens general transcription f... 153 3e-37
BC000287-1|AAH00287.1| 109|Homo sapiens general transcription f... 153 3e-37
>X81713-1|CAA57357.1| 109|Homo sapiens smallest subunit of TFIIA
protein.
Length = 109
Score = 153 bits (372), Expect = 3e-37
Identities = 73/99 (73%), Positives = 85/99 (85%)
Frame = +3
Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
LYRNTT+GN+LQESL ELIQ QITP LA++VLLQFDK+IN AL+ V++R+ F+ G LN
Sbjct: 5 LYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR-GSLN 63
Query: 318 TYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGKN 434
TYRFCDNVWTF+LNDVEFREV EL V+KVKIV CDGKN
Sbjct: 64 TYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
>U21242-1|AAB58247.1| 109|Homo sapiens transcription factor TFIIA
small subunit p12 protein.
Length = 109
Score = 153 bits (372), Expect = 3e-37
Identities = 73/99 (73%), Positives = 85/99 (85%)
Frame = +3
Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
LYRNTT+GN+LQESL ELIQ QITP LA++VLLQFDK+IN AL+ V++R+ F+ G LN
Sbjct: 5 LYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR-GSLN 63
Query: 318 TYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGKN 434
TYRFCDNVWTF+LNDVEFREV EL V+KVKIV CDGKN
Sbjct: 64 TYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
>U14193-1|AAA64951.1| 109|Homo sapiens transcription factor IIA
small 12 kDa subunit protein.
Length = 109
Score = 153 bits (372), Expect = 3e-37
Identities = 73/99 (73%), Positives = 85/99 (85%)
Frame = +3
Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
LYRNTT+GN+LQESL ELIQ QITP LA++VLLQFDK+IN AL+ V++R+ F+ G LN
Sbjct: 5 LYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR-GSLN 63
Query: 318 TYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGKN 434
TYRFCDNVWTF+LNDVEFREV EL V+KVKIV CDGKN
Sbjct: 64 TYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
>CR542192-1|CAG46989.1| 109|Homo sapiens GTF2A2 protein.
Length = 109
Score = 153 bits (372), Expect = 3e-37
Identities = 73/99 (73%), Positives = 85/99 (85%)
Frame = +3
Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
LYRNTT+GN+LQESL ELIQ QITP LA++VLLQFDK+IN AL+ V++R+ F+ G LN
Sbjct: 5 LYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR-GSLN 63
Query: 318 TYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGKN 434
TYRFCDNVWTF+LNDVEFREV EL V+KVKIV CDGKN
Sbjct: 64 TYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
>BT007362-1|AAP36026.1| 109|Homo sapiens general transcription
factor IIA, 2, 12kDa protein.
Length = 109
Score = 153 bits (372), Expect = 3e-37
Identities = 73/99 (73%), Positives = 85/99 (85%)
Frame = +3
Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
LYRNTT+GN+LQESL ELIQ QITP LA++VLLQFDK+IN AL+ V++R+ F+ G LN
Sbjct: 5 LYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR-GSLN 63
Query: 318 TYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGKN 434
TYRFCDNVWTF+LNDVEFREV EL V+KVKIV CDGKN
Sbjct: 64 TYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
>BC001919-1|AAH01919.1| 109|Homo sapiens general transcription
factor IIA, 2, 12kDa protein.
Length = 109
Score = 153 bits (372), Expect = 3e-37
Identities = 73/99 (73%), Positives = 85/99 (85%)
Frame = +3
Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
LYRNTT+GN+LQESL ELIQ QITP LA++VLLQFDK+IN AL+ V++R+ F+ G LN
Sbjct: 5 LYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR-GSLN 63
Query: 318 TYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGKN 434
TYRFCDNVWTF+LNDVEFREV EL V+KVKIV CDGKN
Sbjct: 64 TYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
>BC000287-1|AAH00287.1| 109|Homo sapiens general transcription
factor IIA, 2, 12kDa protein.
Length = 109
Score = 153 bits (372), Expect = 3e-37
Identities = 73/99 (73%), Positives = 85/99 (85%)
Frame = +3
Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
LYRNTT+GN+LQESL ELIQ QITP LA++VLLQFDK+IN AL+ V++R+ F+ G LN
Sbjct: 5 LYRNTTLGNSLQESLDELIQSQQITPQLALQVLLQFDKAINAALAQRVRNRVNFR-GSLN 63
Query: 318 TYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGKN 434
TYRFCDNVWTF+LNDVEFREV EL V+KVKIV CDGKN
Sbjct: 64 TYRFCDNVWTFVLNDVEFREVTELIKVDKVKIVACDGKN 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,606,571
Number of Sequences: 237096
Number of extensions: 1057920
Number of successful extensions: 1428
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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