Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K24
         (583 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-9|CAC35842.1|  113|Caenorhabditis elegans Hypothetical ...   102   2e-22
U32305-4|AAK18861.1|  139|Caenorhabditis elegans Hypothetical pr...   100   9e-22
AF125448-6|AAD12811.1|  160|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z81124-4|CAB03372.1|  341|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AC006673-6|AAF39926.2|  335|Caenorhabditis elegans Serpentine re...    28   5.6  
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    27   7.4  

>AL132904-9|CAC35842.1|  113|Caenorhabditis elegans Hypothetical
           protein Y111B2A.13 protein.
          Length = 113

 Score =  102 bits (244), Expect = 2e-22
 Identities = 43/98 (43%), Positives = 68/98 (69%)
 Frame = +3

Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
           LYRNTT+G  LQ++L + +    I  +L+ K++  FDKSIN+ L +  K+++ F+A KL 
Sbjct: 8   LYRNTTLGQALQKTLDDFVGDQMIPDSLSKKIMDSFDKSINKILPHKAKNKVNFRADKLR 67

Query: 318 TYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGK 431
            YR+CDNVWTF++  ++ R+  E   V+++KIV CDG+
Sbjct: 68  AYRYCDNVWTFIVEQIDLRDAVEGGTVDRLKIVACDGQ 105


>U32305-4|AAK18861.1|  139|Caenorhabditis elegans Hypothetical
           protein B0336.13 protein.
          Length = 139

 Score =  100 bits (239), Expect = 9e-22
 Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
 Frame = +3

Query: 138 LYRNTTIGNTLQESLXELIQYGQITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLN 317
           LYR TT+G  L ++L ++   G +T +LA KVL QFDKS+N+ +S   K ++ F A +L 
Sbjct: 6   LYRGTTLGQALDKTLEDMESEGLLTKSLASKVLQQFDKSMNKQISRLPKEKMNFCATQLL 65

Query: 318 TYRFCDNVWTFMLNDVEFREVQEL--AXVEKVKIVXCDGK 431
           TYR+CDNVWTF+LN+V  ++ Q      ++K+K+V CDG+
Sbjct: 66  TYRYCDNVWTFILNNVTLKDPQRSFDEPIDKLKVVACDGR 105


>AF125448-6|AAD12811.1|  160|Caenorhabditis elegans Hypothetical
           protein H14E04.4 protein.
          Length = 160

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 176 FLKCITNSGISV*VDMTSLFKLHCS*IKNKSISYVLIHEKVTK 48
           FLK + N G+S       L+ +H    KN  I  V+I +K++K
Sbjct: 118 FLKNLKNFGVSPRKKAGVLYSVHQKLAKNSKIDKVMIFQKISK 160


>Z81124-4|CAB03372.1|  341|Caenorhabditis elegans Hypothetical
           protein T21B4.6 protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
 Frame = +3

Query: 207 ITPALAVKVLLQFDKSINQALSNXVKSRLTFKAGKLNTYRFCDNVWTFML-NDVEFREV- 380
           +T  +++ ++LQF+   +  L N    +   K  +  TY F  N + FM+ + + F  + 
Sbjct: 117 LTGVISISIVLQFENRSSLILRN----KFRIKGTRYRTYWFLANFFAFMIFSVINFLNIP 172

Query: 381 -QELAXVEKVKIVXCDGK 431
             + A ++ ++I+ C  K
Sbjct: 173 DPDQARIDILEILPCPTK 190


>AC006673-6|AAF39926.2|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein7 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 282 KSRLTFKAGKLNTYRFCDNVWTFMLNDVEFREVQELAXVEKVKIVXC 422
           K ++  + G+  TY +CDN + F  +   FR   ++A V  V    C
Sbjct: 165 KLKMEQRFGQFETYMWCDNCFFFNFDSNLFRWFFDIAAVSVVLGASC 211


>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 330  CDNVWTFMLNDVEFREVQELAXVEKVKIVXCDGKNVDD 443
            CD+V T  L+D E+R  ++   V+K     C   NV D
Sbjct: 917  CDDVDTNNLSDEEYRMYKKRCQVKKTPKDNCSNVNVKD 954


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,792,627
Number of Sequences: 27780
Number of extensions: 185072
Number of successful extensions: 373
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)