Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K20
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0083 + 27580710-27580767,27580869-27580924,27581024-275811...   100   1e-21
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411           32   0.46 
06_03_1477 + 30408296-30409123,30409227-30410264                       28   5.6  
04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585...    28   5.6  
03_01_0135 + 1061874-1061896,1061953-1061959,1062384-1062464,106...    28   5.6  
11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229...    28   7.4  
03_01_0325 + 2529875-2529922,2530181-2530279,2530958-2531055,253...    27   9.8  

>05_07_0083 +
           27580710-27580767,27580869-27580924,27581024-27581133,
           27582083-27582148,27582149-27582278,27582636-27582737,
           27582969-27583010,27583153-27583194,27583356-27583432,
           27583730-27583856,27583953-27584120,27584359-27584484,
           27584575-27584685,27584776-27584910,27585540-27585614,
           27585827-27585934,27586015-27586101,27586187-27586273,
           27586762-27586830
          Length = 591

 Score =  100 bits (239), Expect = 1e-21
 Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
 Frame = +2

Query: 98  KNFNDLCFKFGLXLDEVTTEKQMLIKEQG-DQADAELS---DEILYRIDIPANXYXXXXX 265
           + F  LCF+FG+ LD+VTTEK ++ KE+  +  D E+    DE++Y+I++ AN +     
Sbjct: 22  EEFEVLCFEFGIELDDVTTEKAIIRKEKHLEDDDGEVDGDDDEVIYKIEVAANSFWEGHF 81

Query: 266 XXXXXXXXXFQGXXXXXXXXXXXXEDCNSLHLTMATAQIRPYAVAAVLXGITFTKESYDS 445
                    F                  +L +   T     Y ++ +             
Sbjct: 82  DISKHYMLMFIANACRYDLLCLEGL-ARALRIFTGTEATPMYKISCIPRDSMLLMHVKPQ 140

Query: 446 FIDLQDKLHQNICRKRTLVAIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELM 625
            + L   + +   RKRTLVAIGTHDLDT+ GPF Y+ALPP EI F  L Q +   A +LM
Sbjct: 141 ILTLSTFMMEK--RKRTLVAIGTHDLDTLKGPFSYEALPPQEINFVPLKQEESFRADKLM 198

Query: 626 ELYSNHAQL 652
           E Y +  +L
Sbjct: 199 EFYKSDMKL 207



 Score = 34.3 bits (75), Expect = 0.085
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = +1

Query: 37  PQLSLKRDALFAALGSTYTDEEFQRPMFQ 123
           P +S+ RD  F ALG TYT EEF+   F+
Sbjct: 2   PTVSVGRDRFFVALGRTYTQEEFEVLCFE 30


>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
          Length = 885

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 207 DNSASAWSPCSLINICFSVVTSSSXKPNLKHRSLKFFISV 88
           +N  +  SP S++  CFS  TSS   P  K+   ++F+S+
Sbjct: 627 NNEPNQPSPTSVLEACFSNDTSSLGSPTEKNEGKEYFVSI 666


>06_03_1477 + 30408296-30409123,30409227-30410264
          Length = 621

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 10  FLNNFINECPQLSLKRDALFAALGSTYTDEEFQRPMFQIWFXA 138
           F+  ++ +CP L +  D L        TD  ++R   Q W  A
Sbjct: 247 FIPKYLEKCPSLMIPNDFLCPISLEIMTDPTYERRSIQKWLDA 289


>04_01_0451 +
           5845249-5846133,5846220-5846509,5855590-5856060,
           5856898-5857063,5857100-5857498,5858031-5858075
          Length = 751

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 613 CS*FFWLIKSFELNLIWRQCIIDEWTM 533
           CS  F ++K    + I R C++D WTM
Sbjct: 623 CSDIFVVLKFLGFDTIPRCCVVDRWTM 649


>03_01_0135 +
           1061874-1061896,1061953-1061959,1062384-1062464,
           1062562-1062604,1064875-1064983,1065221-1065281,
           1065562-1065669,1065670-1065718,1065922-1066055
          Length = 204

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 371 WPSLGVKSYSLHIFSLCTEVEVSSPGTXIDHQQVLRGTISHXYWLG 234
           W SL +   + H F  C E  +S  G  I H+ +    +S  +W+G
Sbjct: 6   WNSLQLCFATYHHFDNCPEPNLSISGCLIQHENI--SQLSTGWWVG 49


>11_04_0365 -
           16818468-16818514,16818619-16821706,16822860-16822919,
           16823595-16823954
          Length = 1184

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +2

Query: 416 ITFTKESYD--SFIDLQDKLHQNICRKRTLVAI 508
           ++ TKES +    +DLQDKL Q I  KR L+ +
Sbjct: 289 VSITKESNNLSELVDLQDKLGQEIRGKRFLLVL 321


>03_01_0325 +
           2529875-2529922,2530181-2530279,2530958-2531055,
           2531945-2532031,2532652-2532684,2532813-2532890,
           2533059-2533183,2533267-2533349,2533436-2533527,
           2533611-2533680,2533760-2533829,2533919-2534073
          Length = 345

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 371 WPSLGVKSYSLHIFSLCTEVEVSSPGTXIDHQ 276
           WP+   K Y +  FS C E E S+  + IDH+
Sbjct: 4   WPTSCTKVYEIIQFSRCKE-EASATSSIIDHR 34


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,795,316
Number of Sequences: 37544
Number of extensions: 292301
Number of successful extensions: 563
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)