BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P04_F_K20 (652 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_07_0083 + 27580710-27580767,27580869-27580924,27581024-275811... 100 1e-21 01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 32 0.46 06_03_1477 + 30408296-30409123,30409227-30410264 28 5.6 04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060,585... 28 5.6 03_01_0135 + 1061874-1061896,1061953-1061959,1062384-1062464,106... 28 5.6 11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229... 28 7.4 03_01_0325 + 2529875-2529922,2530181-2530279,2530958-2531055,253... 27 9.8 >05_07_0083 + 27580710-27580767,27580869-27580924,27581024-27581133, 27582083-27582148,27582149-27582278,27582636-27582737, 27582969-27583010,27583153-27583194,27583356-27583432, 27583730-27583856,27583953-27584120,27584359-27584484, 27584575-27584685,27584776-27584910,27585540-27585614, 27585827-27585934,27586015-27586101,27586187-27586273, 27586762-27586830 Length = 591 Score = 100 bits (239), Expect = 1e-21 Identities = 62/189 (32%), Positives = 91/189 (48%), Gaps = 4/189 (2%) Frame = +2 Query: 98 KNFNDLCFKFGLXLDEVTTEKQMLIKEQG-DQADAELS---DEILYRIDIPANXYXXXXX 265 + F LCF+FG+ LD+VTTEK ++ KE+ + D E+ DE++Y+I++ AN + Sbjct: 22 EEFEVLCFEFGIELDDVTTEKAIIRKEKHLEDDDGEVDGDDDEVIYKIEVAANSFWEGHF 81 Query: 266 XXXXXXXXXFQGXXXXXXXXXXXXEDCNSLHLTMATAQIRPYAVAAVLXGITFTKESYDS 445 F +L + T Y ++ + Sbjct: 82 DISKHYMLMFIANACRYDLLCLEGL-ARALRIFTGTEATPMYKISCIPRDSMLLMHVKPQ 140 Query: 446 FIDLQDKLHQNICRKRTLVAIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELM 625 + L + + RKRTLVAIGTHDLDT+ GPF Y+ALPP EI F L Q + A +LM Sbjct: 141 ILTLSTFMMEK--RKRTLVAIGTHDLDTLKGPFSYEALPPQEINFVPLKQEESFRADKLM 198 Query: 626 ELYSNHAQL 652 E Y + +L Sbjct: 199 EFYKSDMKL 207 Score = 34.3 bits (75), Expect = 0.085 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 37 PQLSLKRDALFAALGSTYTDEEFQRPMFQ 123 P +S+ RD F ALG TYT EEF+ F+ Sbjct: 2 PTVSVGRDRFFVALGRTYTQEEFEVLCFE 30 >01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 Length = 885 Score = 31.9 bits (69), Expect = 0.46 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -2 Query: 207 DNSASAWSPCSLINICFSVVTSSSXKPNLKHRSLKFFISV 88 +N + SP S++ CFS TSS P K+ ++F+S+ Sbjct: 627 NNEPNQPSPTSVLEACFSNDTSSLGSPTEKNEGKEYFVSI 666 >06_03_1477 + 30408296-30409123,30409227-30410264 Length = 621 Score = 28.3 bits (60), Expect = 5.6 Identities = 12/43 (27%), Positives = 19/43 (44%) Frame = +1 Query: 10 FLNNFINECPQLSLKRDALFAALGSTYTDEEFQRPMFQIWFXA 138 F+ ++ +CP L + D L TD ++R Q W A Sbjct: 247 FIPKYLEKCPSLMIPNDFLCPISLEIMTDPTYERRSIQKWLDA 289 >04_01_0451 + 5845249-5846133,5846220-5846509,5855590-5856060, 5856898-5857063,5857100-5857498,5858031-5858075 Length = 751 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -1 Query: 613 CS*FFWLIKSFELNLIWRQCIIDEWTM 533 CS F ++K + I R C++D WTM Sbjct: 623 CSDIFVVLKFLGFDTIPRCCVVDRWTM 649 >03_01_0135 + 1061874-1061896,1061953-1061959,1062384-1062464, 1062562-1062604,1064875-1064983,1065221-1065281, 1065562-1065669,1065670-1065718,1065922-1066055 Length = 204 Score = 28.3 bits (60), Expect = 5.6 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -3 Query: 371 WPSLGVKSYSLHIFSLCTEVEVSSPGTXIDHQQVLRGTISHXYWLG 234 W SL + + H F C E +S G I H+ + +S +W+G Sbjct: 6 WNSLQLCFATYHHFDNCPEPNLSISGCLIQHENI--SQLSTGWWVG 49 >11_04_0365 - 16818468-16818514,16818619-16821706,16822860-16822919, 16823595-16823954 Length = 1184 Score = 27.9 bits (59), Expect = 7.4 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = +2 Query: 416 ITFTKESYD--SFIDLQDKLHQNICRKRTLVAI 508 ++ TKES + +DLQDKL Q I KR L+ + Sbjct: 289 VSITKESNNLSELVDLQDKLGQEIRGKRFLLVL 321 >03_01_0325 + 2529875-2529922,2530181-2530279,2530958-2531055, 2531945-2532031,2532652-2532684,2532813-2532890, 2533059-2533183,2533267-2533349,2533436-2533527, 2533611-2533680,2533760-2533829,2533919-2534073 Length = 345 Score = 27.5 bits (58), Expect = 9.8 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -3 Query: 371 WPSLGVKSYSLHIFSLCTEVEVSSPGTXIDHQ 276 WP+ K Y + FS C E E S+ + IDH+ Sbjct: 4 WPTSCTKVYEIIQFSRCKE-EASATSSIIDHR 34 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,795,316 Number of Sequences: 37544 Number of extensions: 292301 Number of successful extensions: 563 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 554 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 562 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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