Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K20
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052086-1|AAK93510.1|  589|Drosophila melanogaster SD03863p pro...   227   1e-59
AE014297-3508|AAF56268.1|  589|Drosophila melanogaster CG5706-PA...   227   1e-59
AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,...    29   7.2  
AE014296-2655|AAZ66063.1|  175|Drosophila melanogaster CG33688-P...    28   9.6  

>AY052086-1|AAK93510.1|  589|Drosophila melanogaster SD03863p
           protein.
          Length = 589

 Score =  227 bits (555), Expect = 1e-59
 Identities = 115/184 (62%), Positives = 128/184 (69%), Gaps = 1/184 (0%)
 Frame = +2

Query: 104 FNDLCFKFGLXLDEVTTEKQMLIKEQGD-QADAELSDEILYRIDIPANXYXXXXXXXXXX 280
           F DLCF FGL LDEVTTEKQML KEQGD  A A  S+EI+YRIDIPAN Y          
Sbjct: 24  FQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASEEIIYRIDIPANRYDLLCLEGLVT 83

Query: 281 XXXXFQGXXXXXXXXXXXXEDCNSLHLTMATAQIRPYAVAAVLXGITFTKESYDSFIDLQ 460
               FQG                 L +  +TAQIRPYAVAAVL  +TFT+ SY+SFIDLQ
Sbjct: 84  GLLVFQGKLKPPKFQFVELAKRQVLKIDPSTAQIRPYAVAAVLRNVTFTQASYNSFIDLQ 143

Query: 461 DKLHQNICRKRTLVAIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELMELYSN 640
           DKLHQNICRKRTLVAIGTHDLDT+ GPF Y+AL P++IKFK LNQ KE+T  ELM+ YS 
Sbjct: 144 DKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEMTGSELMDFYST 203

Query: 641 HAQL 652
           HAQL
Sbjct: 204 HAQL 207



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 37  PQLSLKRDALFAALGSTYTDEEFQ 108
           P + +KRD LF ALG TYTD+EFQ
Sbjct: 2   PTIGVKRDLLFEALGKTYTDDEFQ 25


>AE014297-3508|AAF56268.1|  589|Drosophila melanogaster CG5706-PA
           protein.
          Length = 589

 Score =  227 bits (555), Expect = 1e-59
 Identities = 115/184 (62%), Positives = 128/184 (69%), Gaps = 1/184 (0%)
 Frame = +2

Query: 104 FNDLCFKFGLXLDEVTTEKQMLIKEQGD-QADAELSDEILYRIDIPANXYXXXXXXXXXX 280
           F DLCF FGL LDEVTTEKQML KEQGD  A A  S+EI+YRIDIPAN Y          
Sbjct: 24  FQDLCFAFGLELDEVTTEKQMLTKEQGDVAAAANASEEIIYRIDIPANRYDLLCLEGLVT 83

Query: 281 XXXXFQGXXXXXXXXXXXXEDCNSLHLTMATAQIRPYAVAAVLXGITFTKESYDSFIDLQ 460
               FQG                 L +  +TAQIRPYAVAAVL  +TFT+ SY+SFIDLQ
Sbjct: 84  GLLVFQGKLKPPKFQFVELAKRQVLKIDPSTAQIRPYAVAAVLRNVTFTQASYNSFIDLQ 143

Query: 461 DKLHQNICRKRTLVAIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELMELYSN 640
           DKLHQNICRKRTLVAIGTHDLDT+ GPF Y+AL P++IKFK LNQ KE+T  ELM+ YS 
Sbjct: 144 DKLHQNICRKRTLVAIGTHDLDTLQGPFSYEALAPDQIKFKPLNQTKEMTGSELMDFYST 203

Query: 641 HAQL 652
           HAQL
Sbjct: 204 HAQL 207



 Score = 39.5 bits (88), Expect = 0.004
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 37  PQLSLKRDALFAALGSTYTDEEFQ 108
           P + +KRD LF ALG TYTD+EFQ
Sbjct: 2   PTIGVKRDLLFEALGKTYTDDEFQ 25


>AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,
            isoform A protein.
          Length = 1893

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 213  SSDNSASAWSPCSLINICFSVVTSSS 136
            SS +S+S+WS C+  + C S  T SS
Sbjct: 923  SSSSSSSSWSSCTTCSTCSSCSTCSS 948


>AE014296-2655|AAZ66063.1|  175|Drosophila melanogaster CG33688-PA
           protein.
          Length = 175

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 17/69 (24%), Positives = 35/69 (50%)
 Frame = +2

Query: 446 FIDLQDKLHQNICRKRTLVAIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELM 625
           +ID+   LHQ +    T++ +  H  +  + PF  D +  +  KF  L  P++    +L 
Sbjct: 52  YIDIYVNLHQQVVNNVTVIKLMRH--NNGYKPFFVD-VTIDVCKF--LKDPRQSIIKKLY 106

Query: 626 ELYSNHAQL 652
           ++Y N++ +
Sbjct: 107 DIYKNNSNI 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,890,920
Number of Sequences: 53049
Number of extensions: 520243
Number of successful extensions: 990
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)