Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K20
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical pr...   186   1e-47
AC024810-5|AAF60763.1|  507|Caenorhabditis elegans Hypothetical ...    75   6e-14
Z48045-1|CAA88103.2|  630|Caenorhabditis elegans Hypothetical pr...    31   0.94 

>Z50044-8|CAA90360.1|  591|Caenorhabditis elegans Hypothetical
           protein F22B5.9 protein.
          Length = 591

 Score =  186 bits (453), Expect = 1e-47
 Identities = 96/187 (51%), Positives = 119/187 (63%), Gaps = 2/187 (1%)
 Frame = +2

Query: 98  KNFNDLCFKFGLXLDEVTTEKQMLIKEQGDQADAELSDEILYRIDIPANXYXXXXXXXXX 277
           K F++LCF++GL LDE+T+EK  + KEQG +A ++L+D+ +Y+IDIPAN Y         
Sbjct: 22  KEFDELCFEYGLELDEITSEKAAVEKEQGTRAASDLNDQEVYKIDIPANRYDLLSVEGLA 81

Query: 278 XXXXXFQGXXXXXXXXXXXXEDCN--SLHLTMATAQIRPYAVAAVLXGITFTKESYDSFI 451
                F+                    + +   TAQ+RP+ V AVL  I+F  +SY SFI
Sbjct: 82  RAIRIFKQEIPSPAYKYADVPKTGLQKIIVKKETAQVRPFVVGAVLRDISFDADSYASFI 141

Query: 452 DLQDKLHQNICRKRTLVAIGTHDLDTIHGPFIYDALPPNEIKFKALNQPKELTAPELMEL 631
           DLQDKLHQNICRKRTLVAIGTHDLDTI GPF Y A  P +IKFK LNQ KE TA ELM L
Sbjct: 142 DLQDKLHQNICRKRTLVAIGTHDLDTIQGPFEYRAEAPKDIKFKPLNQTKEYTAEELMTL 201

Query: 632 YSNHAQL 652
           YS  + L
Sbjct: 202 YSTDSHL 208


>AC024810-5|AAF60763.1|  507|Caenorhabditis elegans Hypothetical
           protein Y54E10A.6 protein.
          Length = 507

 Score = 74.5 bits (175), Expect = 6e-14
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
 Frame = +2

Query: 368 ATAQIRPYAVAAVLXGITFTK-ESYDSFIDLQDKLHQN-ICRKRTLVAIGTHDLDTIHGP 541
           + ++IRPY V  V+  +     +S+  FI LQ K+H + +C  RTL AIGTH LD+   P
Sbjct: 292 SVSEIRPYLVCCVINNVDLNGGDSFKKFIALQTKMHASALCENRTLSAIGTHRLDSFQLP 351

Query: 542 FIYDALPPNEIKFKALNQPKELTAPELMELYSNHAQL 652
             Y ALP +E+  +ALN+   ++A EL++     A+L
Sbjct: 352 LCYMALPKDELYIRALNKKSSVSASELLDSLLRDAEL 388


>Z48045-1|CAA88103.2|  630|Caenorhabditis elegans Hypothetical
           protein C41C4.3 protein.
          Length = 630

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
 Frame = -2

Query: 228 IL*RISSDNSASAWS---PC-SLINI------CFSVVTSSSXKPNLKHRSLKFFISVCRT 79
           I+ +ISS N AS      PC SL N        F + +     PN+  R    F+ V R 
Sbjct: 60  IMSKISSANDASGSKMLHPCYSLSNTNNYKNQLFDIFSVGEFAPNICERQCAHFVDVFRF 119

Query: 78  ECGEKR 61
           ECG++R
Sbjct: 120 ECGDRR 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,979,476
Number of Sequences: 27780
Number of extensions: 273746
Number of successful extensions: 579
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)