Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K17
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.6  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.0  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 56  ALVLCGLLAAVSAAPQYY 109
           A++LC  L AVSAA   Y
Sbjct: 6   AVILCAFLVAVSAAENKY 23


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 417 NLPWDVNSEGSWV 455
           N  WDV+S GSW+
Sbjct: 187 NAWWDVHSTGSWL 199


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +2

Query: 50  MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPLQSLRSGKHVGHTFA 193
           MI L+    + AVSAAP  ++ S    Y H D ++S+ + + + + +A
Sbjct: 1   MIPLIAIAGILAVSAAPAEFYESR---YDHLD-VESILNNRRMVNYYA 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +1

Query: 610  TSAWRQPTRP 639
            TS+W++PT+P
Sbjct: 1163 TSSWQKPTKP 1172


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = +2

Query: 119 SHWPYHHYDPLQSLRSG-KHVGHTFALVQPCQRNATLGQHDEG 244
           +HW     DP Q L  G    GH F LV   Q +  LG    G
Sbjct: 238 THWILSGADP-QKLAIGIAFYGHAFTLVDASQHD--LGSPSSG 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,249
Number of Sequences: 336
Number of extensions: 2900
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)