Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K17
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0659 - 5021159-5021266,5021364-5021494,5021619-5021785,502...    32   0.34 
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152...    32   0.46 
08_02_0985 + 23299996-23300208,23300355-23300520,23300790-233010...    30   1.8  
04_04_0347 + 24564589-24565296                                         29   3.2  
05_03_0626 - 16335816-16335917,16336331-16336558,16336694-163369...    29   4.2  
09_04_0579 + 18676165-18676524,18676846-18677058,18677136-186772...    28   5.6  
10_08_0933 + 21661209-21662813                                         28   7.4  
02_02_0338 + 9105725-9106581,9106950-9107091                           27   9.8  

>01_01_0659 -
           5021159-5021266,5021364-5021494,5021619-5021785,
           5021950-5022065,5022226-5022381,5022570-5022678,
           5023153-5023262,5023807-5023992,5024077-5024667
          Length = 557

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +3

Query: 267 IINEGRVEGDKYXISIHLPGYEQKDINVK 353
           ++ E +VEGD Y + +H PG+  K ++V+
Sbjct: 220 VVKEEKVEGDGYSLGLHAPGFFDKVLHVE 248


>11_06_0645 -
           25814302-25814759,25814853-25815005,25815032-25815214,
           25815342-25815531,25815624-25815784,25816136-25816623,
           25817035-25817075
          Length = 557

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
 Frame = +3

Query: 93  PRHSTTMARHIGRITITTP--FSPYVRESMLDTHSLWSNLANEMQHLDNMMKELSLKFPX 266
           P+ S+T    +G   I  P  F P   +  L  H  WS L+  + H+        L F  
Sbjct: 303 PQISSTYDGSVGLSDIGVPYRFQPDTLDKNLMHHGSWSFLS--IAHI--------LCF-- 350

Query: 267 IINEGRVEGDKYXISIHLPGYEQKDINVKAKNGVLMVQANSAFNHYLKIQNLP 425
           I ++G++EG +  I  H+P  E  D+ V + +   +   +S   H  K  N P
Sbjct: 351 ISSKGQLEGIQVVIDPHVPSVESVDMPVSSMDNSTLEVFSSQQQHSFKCNNTP 403


>08_02_0985 +
           23299996-23300208,23300355-23300520,23300790-23301043,
           23301128-23301340,23301414-23301506,23301609-23301710,
           23302852-23303229
          Length = 472

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
 Frame = +3

Query: 66  CADCWRRS--RPRHSTTMARHIG----RITITTPFSPYVRESMLDTHSLWSNLANEMQHL 227
           CAD W++   + R++   A   G     I  T+P S    E  L+  + WSN  N     
Sbjct: 227 CADVWQKGIRQTRYNLKKAYFNGVPANEIRTTSPISSMTDEQWLELVAKWSNPKNMQISE 286

Query: 228 DNMMKELSLKF 260
            N    L+++F
Sbjct: 287 QNKQNRLNVRF 297


>04_04_0347 + 24564589-24565296
          Length = 235

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 50  MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDP 148
           M  L+   LLAA SAA   +H  ++ PY HH+ P
Sbjct: 5   MSMLLASSLLAAASAARADHHSPAYAPYPHHHAP 38


>05_03_0626 -
           16335816-16335917,16336331-16336558,16336694-16336973,
           16337596-16338560
          Length = 524

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 571 RWSSPPXATCGTLTSAWRQPTRPMR 645
           RW+ PP   C T  S +  P RP R
Sbjct: 120 RWAPPPAPRCSTPLSPYSPPFRPAR 144


>09_04_0579 +
           18676165-18676524,18676846-18677058,18677136-18677288,
           18677503-18677622,18677696-18677782,18677876-18678313
          Length = 456

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +1

Query: 514 ARGQLXSPLXRPLRM*VVKRWSSPPXATCGTLTSAWRQPTRPMR 645
           A G+   P   P     V   SS P   C  LTS +R+P  P R
Sbjct: 5   AVGEATPPPGGPPSRVSVSSSSSTPRRRCAALTSRFREPASPRR 48


>10_08_0933 + 21661209-21662813
          Length = 534

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
 Frame = +2

Query: 107 YHGSSHWPYHHYDPLQS------LRSGKHV--GHTFALVQPCQRNATLGQHDEGAVVEVP 262
           YH    W     DPL        LR G  V   +T     P   +A   QH +   + +P
Sbjct: 142 YHSEGGWD-GLLDPLDQNLRREVLRYGDFVQAAYTAFHSMPSSSSAAASQHSQHRTLVLP 200

Query: 263 XHYKRRTRGRRQVSXIYSPAWLR 331
               R TR     S +  PAW R
Sbjct: 201 DRSYRPTRSLFATSSLSIPAWAR 223


>02_02_0338 + 9105725-9106581,9106950-9107091
          Length = 332

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +2

Query: 41  STRMIALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPLQSLR 163
           +T  + L LC  LAA   A  YYH     P  H  PL + R
Sbjct: 92  ATGFVLLALCLALAAACLAYLYYHPRP--PSFHLQPLAATR 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,242,130
Number of Sequences: 37544
Number of extensions: 337808
Number of successful extensions: 1063
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)