Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K17
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.13 
Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical pr...    32   0.31 
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.41 
Z72517-5|CAA96693.1|  545|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical p...    27   8.7  
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
 Frame = +2

Query: 59  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP----------LQSLRSGKHVGHTFALVQPC 208
           L LC LLA  SA   YY  S + PY++Y P           Q  ++G      +A  QP 
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYPTAAVAGTTGVAQQTQAGGASQQAYAQQQPQ 64

Query: 209 QRNATLGQHDEGAVVEVPXHYKRRT-RGRRQVSXIY 313
           Q      Q+ +G   +   +Y ++T +G++Q +  Y
Sbjct: 65  QNQ----QYAQGTQQQQQQYYPQQTQQGQQQQTLQY 96


>Z75711-5|CAB00036.1|  423|Caenorhabditis elegans Hypothetical
           protein K02B12.7 protein.
          Length = 423

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +3

Query: 381 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAXPTXTTSTN 557
           + + FN +LK  NLP    +EG      + LK T P++ +K+ E S +PV      T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368

Query: 558 VSREEMEFT 584
           V  ++   T
Sbjct: 369 VEDDDSSST 377


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -2

Query: 501 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 397
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>Z72517-5|CAA96693.1|  545|Caenorhabditis elegans Hypothetical
           protein T28F4.2 protein.
          Length = 545

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -1

Query: 598 TLLSVVNSISSRLTF---VEVVSVGXATGLLLSSGCFCFSGKVI 476
           T+ +V+N +  +      + V+SV   TGL+L  G FC +G  I
Sbjct: 445 TVSNVINDLGGQAGLWLGLSVISVVEMTGLMLVMGAFCVTGGAI 488


>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
           protein R155.3 protein.
          Length = 1165

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +3

Query: 447 SWVY--EKD-VLKITFPLKQKQPEDSKRPVAXPTXTTSTNVSREEMEFTTXSNVRDV 608
           SW Y  +KD   +  F +++   E+ K+PV     +   N    E+E T   +++DV
Sbjct: 686 SWFYLHQKDPAARKCFAIRELPMEEVKKPVKKKDVSKMDNKPERELEKTQDESIKDV 742


>Z27079-12|CAD44154.1|   92|Caenorhabditis elegans Hypothetical
           protein T05G5.12 protein.
          Length = 92

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +3

Query: 387 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAXPTXTTSTNVS 563
           S F  Y K+++   D   + ++ Y+K     T P+ QK  + S    A    T ST  S
Sbjct: 5   SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSS 63


>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
           protein F35A5.1 protein.
          Length = 1274

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 489 LKQKQPEDSKRPVAXPTXTTSTNVSRE 569
           LK+K+P  S +PV+ P+ T    V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,112,807
Number of Sequences: 27780
Number of extensions: 272222
Number of successful extensions: 739
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)