Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K16
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 209 5e-53
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 208 7e-53
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 207 2e-52
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 203 2e-51
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 203 2e-51
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 203 2e-51
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 202 4e-51
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 202 6e-51
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 201 1e-50
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 198 1e-49
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 192 8e-48
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 185 7e-46
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 184 2e-45
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 178 8e-44
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 174 1e-42
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 173 2e-42
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 173 4e-42
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 167 2e-40
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 166 4e-40
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 166 4e-40
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 161 1e-38
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 161 1e-38
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 157 2e-37
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 155 7e-37
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 153 3e-36
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 150 3e-35
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 144 2e-33
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 142 7e-33
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 137 2e-31
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 136 3e-31
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 136 4e-31
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 134 2e-30
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 130 2e-29
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 128 9e-29
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 126 5e-28
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 120 4e-26
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 118 1e-25
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 115 9e-25
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 111 1e-23
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 111 1e-23
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 109 7e-23
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 109 7e-23
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 107 2e-22
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 105 1e-21
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 105 1e-21
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 104 2e-21
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 104 2e-21
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 103 3e-21
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 103 5e-21
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 101 1e-20
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 99 1e-19
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 98 1e-19
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 98 2e-19
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 97 3e-19
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 95 1e-18
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 95 1e-18
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 93 5e-18
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 93 7e-18
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 92 1e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 92 1e-17
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 92 1e-17
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 90 5e-17
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 89 1e-16
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 88 2e-16
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 87 3e-16
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 87 5e-16
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 87 5e-16
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 86 6e-16
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 85 1e-15
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 85 2e-15
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 84 3e-15
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 83 6e-15
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 83 6e-15
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 83 6e-15
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 81 2e-14
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 81 2e-14
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 81 3e-14
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 80 4e-14
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 80 4e-14
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 79 9e-14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 77 3e-13
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 76 8e-13
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 73 5e-12
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 72 1e-11
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 72 1e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 70 6e-11
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 69 1e-10
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 69 1e-10
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 59 1e-07
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 58 1e-07
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 56 6e-07
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 56 1e-06
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 54 3e-06
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 53 7e-06
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 52 1e-05
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 50 4e-05
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 49 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 1e-04
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 48 2e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 6e-04
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 43 0.007
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 42 0.010
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.039
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 40 0.052
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.1
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 35 1.5
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.9
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 34 2.6
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 33 7.8
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 7.8
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 209 bits (510), Expect = 5e-53
Identities = 106/165 (64%), Positives = 114/165 (69%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL+LGAPD+AFPR+NN+ F IV NGAGTG TVYPPLSSNIAH G S
Sbjct: 56 IPLMLGAPDMAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSS 115
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHLAGISS SFDQ+PLF+ AVGITA
Sbjct: 116 VDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVL 175
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 585
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 176 AGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 208 bits (509), Expect = 7e-53
Identities = 108/186 (58%), Positives = 122/186 (65%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL++GAPD+AFPR+NN+ F V GAGTG TVYPPL+ N+AH G S
Sbjct: 84 VPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGAS 143
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHLAGISS S Q PLFV +V ITA
Sbjct: 144 VDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVL 203
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP FG+ISH+++
Sbjct: 204 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYA 263
Query: 631 GKKETF 648
GKKE F
Sbjct: 264 GKKEPF 269
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 207 bits (506), Expect = 2e-52
Identities = 106/186 (56%), Positives = 120/186 (64%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL++GAPD+AFPR+NN+ F V GAGTG TVYPPL+ N+AH G S
Sbjct: 83 VPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGAS 142
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V L IFSLHLAG+SS S Q PLFV AV +TA
Sbjct: 143 VDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVL 202
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP FGIISH+++
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYA 262
Query: 631 GKKETF 648
GKKE F
Sbjct: 263 GKKEPF 268
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 203 bits (496), Expect = 2e-51
Identities = 103/186 (55%), Positives = 120/186 (64%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL++GAPD+AFPR+NN+ F V GAGTG TVYPPL+ N+AH G S
Sbjct: 83 VPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGAS 142
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V L IFSLHLAG+SS + Q PLFV +V +TA
Sbjct: 143 VDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVL 202
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP FG+ISH+++
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYA 262
Query: 631 GKKETF 648
GKKE F
Sbjct: 263 GKKEPF 268
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 203 bits (496), Expect = 2e-51
Identities = 104/186 (55%), Positives = 120/186 (64%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL++GAPD+AFPR+NN+ F +V GAGTG TVYPPL+ N +H G S
Sbjct: 83 VPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGAS 142
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V L IFSLHLAG+SS + Q PLFV +V ITA
Sbjct: 143 VDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVL 202
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILP FG+ISHI++
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYS 262
Query: 631 GKKETF 648
GKKE F
Sbjct: 263 GKKEPF 268
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 203 bits (496), Expect = 2e-51
Identities = 102/182 (56%), Positives = 120/182 (65%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VP+++GAPD+AFPR+NNI F +V G+GTG TVYPPLS +H G +
Sbjct: 86 VPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGA 145
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHL+G+SS + +LPLFV +V +TAF
Sbjct: 146 VDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVL 205
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILP FGIISHI+S
Sbjct: 206 AGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFS 265
Query: 631 GK 636
GK
Sbjct: 266 GK 267
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 202 bits (494), Expect = 4e-51
Identities = 102/186 (54%), Positives = 119/186 (63%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL+LG+PD++FPR+NN+ F + G GTG TVYPPLS + H G S
Sbjct: 67 IPLMLGSPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMS 126
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V L IFSLHLAG SS + D++ LF +V ITA
Sbjct: 127 VDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVL 186
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILP FGIISH+I E
Sbjct: 187 AGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNES 246
Query: 631 GKKETF 648
GKKETF
Sbjct: 247 GKKETF 252
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 202 bits (493), Expect = 6e-51
Identities = 103/161 (63%), Positives = 111/161 (68%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL+LGAPD+AFPR+NN+ F IV NGAGTG TVYPPLSSNIAH G S
Sbjct: 80 VPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSS 139
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHLAGISS SFDQ+PLFV AVGITAF
Sbjct: 140 VDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVL 199
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 573
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 200 AGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 201 bits (491), Expect = 1e-50
Identities = 101/182 (55%), Positives = 118/182 (64%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VP+++GAPD+AFPR+NNI F V GAGTG TVYPPLS +H G S
Sbjct: 83 VPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGS 142
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 143 VDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVL 202
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+P FG++SHI+S
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFS 262
Query: 631 GK 636
GK
Sbjct: 263 GK 264
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 198 bits (482), Expect = 1e-49
Identities = 101/174 (58%), Positives = 121/174 (69%)
Frame = -1
Query: 548 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 369
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 368 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARXTDLPLCAILDESGG*TVHPVPAPFXTIL 189
+R I+E PAKC+EKI TD P CAI SGG TVHPVP P TI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIP 119
Query: 188 LEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPIIIGITXKKSYNKS 27
L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPPI+IG+T KK K+
Sbjct: 120 LNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKA 173
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 192 bits (467), Expect = 8e-48
Identities = 96/177 (54%), Positives = 116/177 (65%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VP+++G+PD+AFPR+NNI F +V G GTG TVYPPLSS +H G +
Sbjct: 91 VPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGA 150
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLH++G SS S ++PLFV ++ +TAF
Sbjct: 151 VDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVL 210
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILP FG+ISHI+S
Sbjct: 211 AGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS 267
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 185 bits (451), Expect = 7e-46
Identities = 97/186 (52%), Positives = 115/186 (61%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GA D AFPRINNI F +V +GAGTG TVYPPLSS AH G S
Sbjct: 84 LPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPS 143
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 144 VDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVL 203
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+P FGIISH++S
Sbjct: 204 SAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TY 262
Query: 631 GKKETF 648
KK F
Sbjct: 263 SKKPVF 268
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 184 bits (448), Expect = 2e-45
Identities = 97/186 (52%), Positives = 114/186 (61%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GA D++FPRIN+I F +V +GAGTG TVYPPLSS AH G S
Sbjct: 84 LPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPS 143
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHL ISS S ++PLFV A+ ITAF
Sbjct: 144 VDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVL 203
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
+ IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+P FGI+SHI+S
Sbjct: 204 SAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TY 262
Query: 631 GKKETF 648
KK F
Sbjct: 263 SKKPVF 268
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 178 bits (434), Expect = 8e-44
Identities = 92/186 (49%), Positives = 108/186 (58%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VP+++GAPD++FPR+NN F G GTG TVYPPLSS +H G S
Sbjct: 87 VPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGAS 146
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V L IFS HL GI S LPLFV +V +T+F
Sbjct: 147 VDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVL 206
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILP FG++SHII+
Sbjct: 207 AAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TF 265
Query: 631 GKKETF 648
KK F
Sbjct: 266 SKKRVF 271
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 174 bits (424), Expect = 1e-42
Identities = 93/182 (51%), Positives = 106/182 (58%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL LG PD+ FPR+NNI + + NG GTG T+YPPLS +H G S
Sbjct: 84 LPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPS 143
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIF LHL+GISS +L LF AV ITA
Sbjct: 144 VDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVL 203
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+P FGIIS IS
Sbjct: 204 AGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTISANS 263
Query: 631 GK 636
K
Sbjct: 264 NK 265
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 173 bits (422), Expect = 2e-42
Identities = 81/177 (45%), Positives = 111/177 (62%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GAPD+AFPR+NN+ + ++ GAG G T YPP+S+ R+
Sbjct: 189 MPLMIGAPDMAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRA 248
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V AIF++H++G SS + ++PLF +V +TA+
Sbjct: 249 VDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVL 308
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++
Sbjct: 309 AGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA 365
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 173 bits (420), Expect = 4e-42
Identities = 89/182 (48%), Positives = 107/182 (58%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P+++G PD+AFPR+NN+ + I+ NG GTG T+YPPLS +H
Sbjct: 110 LPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMG 169
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V L IF LHL+GISS +L LF AV ITA
Sbjct: 170 VDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVL 229
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+P FGIIS +IS
Sbjct: 230 AAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVISANS 289
Query: 631 GK 636
K
Sbjct: 290 NK 291
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 167 bits (407), Expect = 2e-40
Identities = 90/181 (49%), Positives = 110/181 (60%), Gaps = 4/181 (2%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV----XNGAGTG*TVYPPLSSNIAH 258
VP+++GAPD+AFPR+NNI F V NGAGTG TVY PLS++
Sbjct: 123 VPIMIGAPDMAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GS 181
Query: 259 RGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 438
G +V +AI SLH+AG SS + ++PLFV +V +TAF
Sbjct: 182 AGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLA 241
Query: 439 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILP FGIIS I+
Sbjct: 242 LPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIV 301
Query: 619 S 621
S
Sbjct: 302 S 302
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 166 bits (404), Expect = 4e-40
Identities = 84/186 (45%), Positives = 111/186 (59%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +G+ D AFPRINN+ F ++ G G+G T+YPPL+S +H G S
Sbjct: 101 VPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSS 160
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ +AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 161 IDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVL 220
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVY 279
Query: 631 GKKETF 648
KK F
Sbjct: 280 AKKPIF 285
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 166 bits (404), Expect = 4e-40
Identities = 84/186 (45%), Positives = 111/186 (59%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +G+ D AFPRINN+ F ++ G G+G T+YPPL+S +H G S
Sbjct: 101 VPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSS 160
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ +AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 161 IDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVL 220
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVY 279
Query: 631 GKKETF 648
KK F
Sbjct: 280 AKKPIF 285
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 161 bits (392), Expect = 1e-38
Identities = 84/157 (53%), Positives = 98/157 (62%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL++GAPD+AFPR+NNI F +V GAGTG TVYPPL+S AH G S
Sbjct: 84 VPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGS 143
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V +AIFSLHLAG+SS + ++PLFV +V ITA
Sbjct: 144 VDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVL 203
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 561
AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 204 AGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 161 bits (391), Expect = 1e-38
Identities = 84/153 (54%), Positives = 94/153 (61%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL+LGAPD+AFPR+NN+ F V +GAGTG TVYPPLS N AH G S
Sbjct: 66 VPLMLGAPDMAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPS 125
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHLAG+SS + + LFV +V ITA
Sbjct: 126 VDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVL 185
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 549
AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 186 AGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 157 bits (381), Expect = 2e-37
Identities = 81/153 (52%), Positives = 94/153 (61%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VP+++GAPD+AFPR+NNI F V GAGTG TVYPPLS +H G S
Sbjct: 83 VPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGS 142
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 143 VDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVL 202
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 549
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 155 bits (377), Expect = 7e-37
Identities = 85/156 (54%), Positives = 94/156 (60%)
Frame = +1
Query: 97 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRSVX 276
L LGAPD FPR N+ F V GAGTG TV PPLS+NIAH G SV
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 277 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 456
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 457 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 564
AIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 124 AITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 153 bits (371), Expect = 3e-36
Identities = 85/186 (45%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TV----YPPLSSNIAH 258
+PL++G PD+AFPR+NNI F I+ G GTG T+ YPPLS +H
Sbjct: 112 MPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSH 171
Query: 259 RGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 438
G SV LAIF+LHL+G+SS +L LF +
Sbjct: 172 SGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALF-------GWATWSS 224
Query: 439 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+P FGIIS I
Sbjct: 225 RSRYFLGITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTI 284
Query: 619 SQERGK 636
S K
Sbjct: 285 SSSSNK 290
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 150 bits (363), Expect = 3e-35
Identities = 80/166 (48%), Positives = 97/166 (58%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GA D AFPRINNI F +V +GAGTG TVYPPLSS AH G S
Sbjct: 84 LPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPS 143
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIF+LHL ISS + +LPLFV ++ ITAF
Sbjct: 144 VDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVL 203
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 588
+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 204 SAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 144 bits (348), Expect = 2e-33
Identities = 76/157 (48%), Positives = 92/157 (58%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GA D AFPRINNI F +V +GAGTG TVYPPL+S AH G S
Sbjct: 84 LPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPS 143
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIF+LH+ ISS + +LPLFV A+ ITA
Sbjct: 144 VDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVL 203
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 561
+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 204 SAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 142 bits (344), Expect = 7e-33
Identities = 73/187 (39%), Positives = 101/187 (54%), Gaps = 1/187 (0%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++ D++ PR+NN+ + G G G T+YPPLS++ G
Sbjct: 85 IPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLP 144
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*AVGITAFXXXXXXXX 447
+ LA+FSLH+AG+SS F L P+ + + T+
Sbjct: 145 IDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPV 204
Query: 448 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQE 627
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 205 LAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRS 264
Query: 628 RGKKETF 648
K F
Sbjct: 265 SAKLHVF 271
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 137 bits (332), Expect = 2e-31
Identities = 70/176 (39%), Positives = 92/176 (52%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL+LGAP++AFPR+N + F + G G+ T YPPLS S
Sbjct: 94 LPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELS 152
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ I LH GI S + DQ+ +FV +T+F
Sbjct: 153 LDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVL 212
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS +
Sbjct: 213 AGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAV 268
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 136 bits (330), Expect = 3e-31
Identities = 70/176 (39%), Positives = 93/176 (52%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P++ G PD+ FPR+NN+ F + G G G T+YP L H +
Sbjct: 86 IPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLA 145
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+F++HL GISS SF LF+ A ITA
Sbjct: 146 CDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVL 205
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+
Sbjct: 206 AGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV 261
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 136 bits (329), Expect = 4e-31
Identities = 73/183 (39%), Positives = 104/183 (56%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +G+ D AFPRINN+ F ++ G G+G T+YPPL+S +H G S
Sbjct: 101 VPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSS 160
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ +AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 161 IDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVL 220
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG +++ +I+ II++ I +
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG--QIWPIIIIIIIIINYAICGKD 278
Query: 631 GKK 639
KK
Sbjct: 279 FKK 281
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 134 bits (323), Expect = 2e-30
Identities = 72/166 (43%), Positives = 92/166 (55%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL+LGA D+AF R+NNI F +V GAGTG TVY PL+ +H G +
Sbjct: 89 MPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPA 148
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHL+G SS ++ +PLF AV TA
Sbjct: 149 VDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVL 208
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 588
A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 209 AAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 130 bits (315), Expect = 2e-29
Identities = 68/178 (38%), Positives = 97/178 (54%), Gaps = 1/178 (0%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGR- 267
+P++ G+P++A+PRIN+I G GTG T+YPPLS+++
Sbjct: 88 LPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPV 147
Query: 268 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 447
+V + IF L ++G++S + L + ++ IT+
Sbjct: 148 AVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPV 207
Query: 448 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 208 LTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 128 bits (310), Expect = 9e-29
Identities = 71/171 (41%), Positives = 96/171 (56%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +G+ D AFPRINN+ F ++ G G+G T+YPPL+S +H G S
Sbjct: 101 VPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSS 160
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ +AIF+LHL+G+SS + +LPLFV +V ITA
Sbjct: 161 IDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVL 220
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGI 603
A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 126 bits (304), Expect = 5e-28
Identities = 69/140 (49%), Positives = 80/140 (57%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GAPD+AFPR+NN+ F + GAGTG TVYPPL+ N+AH G S
Sbjct: 72 IPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGAS 131
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V L IFSLHLAGISS S Q PLFV AV ITA
Sbjct: 132 VDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVL 191
Query: 451 AGAITILLTDRNLNTSFFDP 510
A IT+LLTDRNLNT+FFDP
Sbjct: 192 AAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 120 bits (288), Expect = 4e-26
Identities = 71/175 (40%), Positives = 90/175 (51%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P+ L D+ PR+N++ + G G G T+YPPLS G
Sbjct: 181 LPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELS--LYYGCGIGWTLYPPLSI-WEGSGFG 237
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V +FSLHLAG+SS S + V A T+
Sbjct: 238 VDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVWAYLFTSVLLLLSLPVL 292
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHI 615
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILP FGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 118 bits (284), Expect = 1e-25
Identities = 61/176 (34%), Positives = 91/176 (51%)
Frame = +1
Query: 94 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRSV 273
P++LG D+ +PR+N + G+GTG T+YPPLS+++++ G +
Sbjct: 92 PVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--I 149
Query: 274 XLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 453
IF L AGI+S D++ ++ +T+F
Sbjct: 150 DFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVT 209
Query: 454 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILP FGIIS ++S
Sbjct: 210 AVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLS 265
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 115 bits (277), Expect = 9e-25
Identities = 64/183 (34%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNG-AGTG*TVYPPLSSNIAHRGR 267
+PL++GA D+AFPR+N F G AG G T Y PLS+N+ G
Sbjct: 115 IPLMIGARDMAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGM 174
Query: 268 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 447
L + ++ + G+SS ++ +LPL + + +TA
Sbjct: 175 GQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIWGLWLTAILNALFVPV 234
Query: 448 XAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPXFGIISH 612
A +LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+
Sbjct: 235 LGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGILGD 294
Query: 613 IIS 621
++S
Sbjct: 295 VLS 297
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 111 bits (268), Expect = 1e-23
Identities = 66/176 (37%), Positives = 90/176 (51%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P PD+ FPR+N + F ++ + A G T YPPLSS S
Sbjct: 78 IPYHCNLPDLLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPS 128
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V ++FSLHLAGI+S + L LF ++ + +
Sbjct: 129 VEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCWSIVLVSLLLVLSLPVL 186
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 111 bits (267), Expect = 1e-23
Identities = 63/176 (35%), Positives = 84/176 (47%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL++GA D+AFPR+N+ F + + G Y PLSS +
Sbjct: 102 VPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQG 161
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V I L + GI S S ++PLFV + + A
Sbjct: 162 VDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPAL 221
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILP FG+IS +I
Sbjct: 222 NSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 109 bits (261), Expect = 7e-23
Identities = 61/176 (34%), Positives = 86/176 (48%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GA D+AFPR+N + + I N T T YPP S N +
Sbjct: 41 LPLMIGAKDVAFPRLNALSWWAFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGV 98
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
L +F +HL G SS +F + LFV +
Sbjct: 99 TALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSL 158
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 109 bits (261), Expect = 7e-23
Identities = 65/176 (36%), Positives = 83/176 (47%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++G D+AFPR+N + F V G T YPPLS G
Sbjct: 97 IPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGEE 155
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
L I SL L G SS +PLF A+ T+
Sbjct: 156 --LWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVL 213
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI 269
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 107 bits (257), Expect = 2e-22
Identities = 58/179 (32%), Positives = 96/179 (53%), Gaps = 2/179 (1%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGA-GTG*TVYPPLSSNIAHR-G 264
+P+++G +++ PR+N I F ++ + +G T+YPPLS+ A G
Sbjct: 93 IPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIG 152
Query: 265 RSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 444
++ L++ +H+ GISS +F + ++ ++ +T+
Sbjct: 153 VNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLP 212
Query: 445 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 213 ILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 105 bits (251), Expect = 1e-21
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 3/178 (1%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNG-AGTG*TVYPPLS--SNIAHR 261
+P ++GAPD+AFP++N F G A +G YPP+S + + H
Sbjct: 106 IPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHF 165
Query: 262 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 441
L I ++ L+GISS F ++P+FV
Sbjct: 166 INGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGL 225
Query: 442 XXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHI 615
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 226 PALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSEL 283
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 105 bits (251), Expect = 1e-21
Identities = 71/191 (37%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNG---AGTG*TVYPPLS-----S 246
+PL++GA D+AFPRIN I F A TG T+Y PLS
Sbjct: 164 IPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMG 223
Query: 247 NIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFX 426
N A+ G V L + LHL+G+S+ S+ L +F + +
Sbjct: 224 NQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGL 281
Query: 427 XXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGII 606
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GII
Sbjct: 282 ILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGII 339
Query: 607 SHIISQERGKK 639
S+I+ + G++
Sbjct: 340 SYILPRFSGRR 350
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 104 bits (249), Expect = 2e-21
Identities = 59/177 (33%), Positives = 84/177 (47%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL++G IAFPR+N + V G G Y PLS G+
Sbjct: 99 VPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKR 158
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + +S+ S D++PLFV ++ +T+F
Sbjct: 159 ADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAI 218
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++
Sbjct: 219 MIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVA 275
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 104 bits (249), Expect = 2e-21
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXN--GAGTG*TVYPPLSSNIAHRG 264
+PL++ A D+AFPRIN I F ++ A T T+Y PLS ++
Sbjct: 138 IPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--S 195
Query: 265 RSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 444
+V + + LHL G+S+ + L +F + +
Sbjct: 196 PAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSWTMLTQSGLILFAFP 255
Query: 445 XXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQ 624
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ +
Sbjct: 256 LFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPK 314
Query: 625 ERGKK 639
G+K
Sbjct: 315 FSGRK 319
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 103 bits (248), Expect = 3e-21
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL+LGA D+AFPR+N + ++ G TG T Y P S AH +
Sbjct: 113 LPLMLGAKDVAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYTPYS---AHTTTT 168
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V +F + G SS ++ ++PLFV A+ T+
Sbjct: 169 VAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVWAIYATSCIQVLATPVI 228
Query: 451 AGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++
Sbjct: 229 -GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA 285
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 103 bits (246), Expect = 5e-21
Identities = 61/176 (34%), Positives = 80/176 (45%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL++GA D+AFPR+N + V G Y PL+
Sbjct: 101 VPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAG 160
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V I + L G++S + +++PLFV + AF
Sbjct: 161 VDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQLVVAFILIFAFPVL 220
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++
Sbjct: 221 TVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL 276
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 101 bits (242), Expect = 1e-20
Identities = 60/177 (33%), Positives = 81/177 (45%), Gaps = 1/177 (0%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGT-G*TVYPPLSSNIAHRGR 267
+PL +GAPD+AFPR+N F + GA G T+Y PLS I G
Sbjct: 108 LPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGL 167
Query: 268 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 447
+ I + GI S + ++P+F + + +
Sbjct: 168 GSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWNIFVVSVLALLIFPL 227
Query: 448 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A +L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II
Sbjct: 228 LLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 98.7 bits (235), Expect = 1e-19
Identities = 60/184 (32%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-XNGAGTG*TVYPPLSSNIAHRGR 267
VP ++GAPD+ +PRIN + F + +G G T+YPPLS+ +
Sbjct: 89 VPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--ISKSI 146
Query: 268 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 447
V L + + +AG SS + LF +V +
Sbjct: 147 GVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAWSVLAASMLMVTALPP 206
Query: 448 XAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISH 612
A +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S
Sbjct: 207 LAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSE 266
Query: 613 IISQ 624
+I +
Sbjct: 267 VIQR 270
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 98.3 bits (234), Expect = 1e-19
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGA-GTG*TVYPPLSSNIAHRGR 267
VPL +GA D+AFPR+N + + +GA G T+Y PL++ I G
Sbjct: 91 VPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGI 150
Query: 268 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 447
+ LA ++ L +S + ++P+F ++ T
Sbjct: 151 GLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTWSILFTVILMLWAFPP 210
Query: 448 XAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQ 624
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS
Sbjct: 211 LMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVIST 268
Query: 625 ERGK 636
GK
Sbjct: 269 FSGK 272
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 97.9 bits (233), Expect = 2e-19
Identities = 57/177 (32%), Positives = 78/177 (44%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +GA D+AFP +NN+ F ++ G T Y PL+SN G
Sbjct: 123 VPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPG 182
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ L +AGI + + ++P+F IT
Sbjct: 183 ENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVL 242
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS
Sbjct: 243 TVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS 299
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 97.1 bits (231), Expect = 3e-19
Identities = 53/176 (30%), Positives = 82/176 (46%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P+++GA D+AFP++N + F +V GA TG T Y P S+ +
Sbjct: 106 LPIMIGAKDVAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITKVVP 164
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V L F L G SS + +LPLFV ++ T+
Sbjct: 165 VLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVWSIYATSVIQILATPVL 221
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++
Sbjct: 222 GMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV 277
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 95.5 bits (227), Expect = 1e-18
Identities = 57/183 (31%), Positives = 82/183 (44%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +GA D+AFP +N++ F V N A TG YPPL+
Sbjct: 128 VPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTGWVAYPPLAELGFSPDVG 187
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V I++L ++GI + +P+F
Sbjct: 188 VDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTCTWANVLIATSFPIL 247
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S
Sbjct: 248 TGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFA 307
Query: 631 GKK 639
GK+
Sbjct: 308 GKR 310
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 95.5 bits (227), Expect = 1e-18
Identities = 53/122 (43%), Positives = 64/122 (52%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VP+++GAPD+AFPR+NNI F V GAGTG TVYPPLS +H G S
Sbjct: 83 VPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGS 142
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V LAIFSLHL+GISS + +LPLFV A+ +TA
Sbjct: 143 VDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVL 202
Query: 451 AG 456
AG
Sbjct: 203 AG 204
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 93.1 bits (221), Expect = 5e-18
Identities = 50/176 (28%), Positives = 81/176 (46%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +GA D++FP +N + F + G T Y LS + +G
Sbjct: 94 VPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHG 151
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + L ++G+ + ++ +LPLF + +
Sbjct: 152 IDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPL 211
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I
Sbjct: 212 TVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI 267
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 92.7 bits (220), Expect = 7e-18
Identities = 56/183 (30%), Positives = 80/183 (43%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +GA D+AFP +N++ F V A TG YPPL+ G
Sbjct: 127 VPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVG 186
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V I++L L+G+ + +P+F
Sbjct: 187 VDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPIL 246
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S
Sbjct: 247 TAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFA 306
Query: 631 GKK 639
GK+
Sbjct: 307 GKR 309
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 91.9 bits (218), Expect = 1e-17
Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVX-NGAGTG*TVYPPLS---SNIAH 258
+PL++GA D+AFP +N + + +GA G T YPPLS ++
Sbjct: 117 IPLMIGADDMAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLSDMTTSAPS 176
Query: 259 RGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 438
G + L + + G+SS + +LPL + A+ ITA
Sbjct: 177 SGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGMTMFRLPLTIWAMFITALLQAFA 236
Query: 439 XXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILI 585
A ++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+I
Sbjct: 237 LPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMI 296
Query: 586 LPXFGIISHIIS 621
LP G++S I++
Sbjct: 297 LPAMGMVSDILA 308
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 91.9 bits (218), Expect = 1e-17
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = +1
Query: 484 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETF 648
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILP FG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPF 245
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 91.9 bits (218), Expect = 1e-17
Identities = 65/196 (33%), Positives = 88/196 (44%), Gaps = 14/196 (7%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNG-AGTG*TVYPP--LSSNIAHR 261
+PL++GA D+ FP +N + + V G G G T+YPP + S +
Sbjct: 110 IPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPPQAILSGTPGQ 169
Query: 262 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV-GITAFXXXXX 438
+ L + SL L I + +LPL V + T
Sbjct: 170 DWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLPLTVWGIFTATVMALLAF 229
Query: 439 XXXXAGAITILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILIL 588
G++ +LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ L
Sbjct: 230 PALFVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVAL 288
Query: 589 PXFGIISHIISQERGK 636
P FGI+S +IS K
Sbjct: 289 PAFGIVSDLISTHARK 304
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 89.8 bits (213), Expect = 5e-17
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGA-GTG*TVYPPLSSNIAHRGR 267
VPL+LGA D+A PR+N + GA G T Y P S+ + G
Sbjct: 95 VPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFSAQ-SESGV 153
Query: 268 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 447
LA ++ L G SS S ++P++V +V +
Sbjct: 154 DFYLA--AILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWSVFAASVLNLFSLAG 211
Query: 448 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S
Sbjct: 212 LTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS 269
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 88.6 bits (210), Expect = 1e-16
Identities = 54/176 (30%), Positives = 77/176 (43%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 106 IPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLG 165
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + IS+ S +++P+FV AV + +F
Sbjct: 166 LDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPL 225
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II
Sbjct: 226 VIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 87.8 bits (208), Expect = 2e-16
Identities = 52/182 (28%), Positives = 80/182 (43%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GA D+ FPR+ + + G +Y PLS++ G S
Sbjct: 125 IPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLS 184
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + LA I+S S ++P+ + + TAF
Sbjct: 185 ADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPL 244
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++
Sbjct: 245 IIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFV 304
Query: 631 GK 636
GK
Sbjct: 305 GK 306
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 87.4 bits (207), Expect = 3e-16
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = +3
Query: 483 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTXIWYNFSYYFTRKRKKRNFW 650
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLW 62
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 86.6 bits (205), Expect = 5e-16
Identities = 52/172 (30%), Positives = 75/172 (43%)
Frame = +1
Query: 94 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRSV 273
PL+LG+ D+AFPR+ + + G Y PL+S G ++
Sbjct: 120 PLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANI 179
Query: 274 XLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 453
+ + L GIS+ S D+LP+ V + +
Sbjct: 180 DIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGTLTASVSNLVAVPSVS 239
Query: 454 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIIS 609
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 240 LAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 86.6 bits (205), Expect = 5e-16
Identities = 57/187 (30%), Positives = 84/187 (44%), Gaps = 1/187 (0%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLS-SNIAHRGR 267
VP ++GA D+ +P+IN + F ++ G +Y PLS + G
Sbjct: 83 VPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGWYMYAPLSVETTVNYGL 141
Query: 268 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 447
L +L L+G+SS + ++PLFV TA
Sbjct: 142 GTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVWGFFTTAILMIIAMPS 199
Query: 448 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQE 627
+ +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ +
Sbjct: 200 LTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PK 258
Query: 628 RGKKETF 648
++E F
Sbjct: 259 MARREIF 265
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 86.2 bits (204), Expect = 6e-16
Identities = 57/182 (31%), Positives = 76/182 (41%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +GA D+AFP +N+I +V + G YPP + + + G
Sbjct: 147 VPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNPGIG 206
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V I+SL LA + S +PLF TA
Sbjct: 207 VDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTALCTAIMMIFAMPPL 266
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQER 630
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S
Sbjct: 267 TVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFS 326
Query: 631 GK 636
GK
Sbjct: 327 GK 328
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 85.4 bits (202), Expect = 1e-15
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL++GA D+AFPR+N + + + T YPP S I H +
Sbjct: 86 IPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHG--N 142
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
FS+ L G +S +++L +FV A + AF
Sbjct: 143 TAFYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVWAT-LAAFVLQLIFVPV 201
Query: 451 AG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 202 LGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 84.6 bits (200), Expect = 2e-15
Identities = 51/176 (28%), Positives = 75/176 (42%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P +LG+ D+AFPR+ F + +G +YPPLSS + G +
Sbjct: 99 LPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGIN 158
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + IS+ S ++P+F +TA
Sbjct: 159 SDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPL 218
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 219 ILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 83.8 bits (198), Expect = 3e-15
Identities = 61/196 (31%), Positives = 89/196 (45%), Gaps = 14/196 (7%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*-TVYPPLSS---NIAH 258
+PL +GA D+A +N + + + G +G +YPPLS+ ++
Sbjct: 131 IPLQIGARDMASGFMNMLSYWFFFGSSVIMFASIFLETGPASGSWVIYPPLSALPQAMSG 190
Query: 259 RGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 438
G + + + S+ L IS SF +LPL + A ITA
Sbjct: 191 SGAGMTMWLISMALFIISVLLGGINYITTVINLRVKGMSFTRLPLTIWAFFITAIIGLLS 250
Query: 439 XXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILIL 588
A +L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++
Sbjct: 251 FPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLI 310
Query: 589 PXFGIISHIISQERGK 636
P GI S +I+ K
Sbjct: 311 PALGITSEVIATNARK 326
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 83.0 bits (196), Expect = 6e-15
Identities = 54/180 (30%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAG----TG*TVYPPLSSNIAH 258
+PL++GA D+AFPR+N + ++ G G Y L+S
Sbjct: 99 LPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVPDIGWFGYANLTSVQFT 158
Query: 259 RGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXX 438
G L L GI + + ++P+FV +T+
Sbjct: 159 SGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTTLVTSAIIIFA 218
Query: 439 XXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I
Sbjct: 219 FPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI 278
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 83.0 bits (196), Expect = 6e-15
Identities = 52/177 (29%), Positives = 77/177 (43%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 122 IPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSPWVG 181
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V +S+ ++GI + F+++ +F+ +
Sbjct: 182 VDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISFPIL 241
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
+ + DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 242 TILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 83.0 bits (196), Expect = 6e-15
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Frame = +1
Query: 217 G*TVYPPLSSNIAHRG-RSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 387
G T P SSNI + G S + I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 388 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 567
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 568 EVYILILPXFGIISHIISQERGKK 639
EVY+LI+P FG I+ I+ ++
Sbjct: 403 EVYVLIIPTFGFINMIVPHNNTRR 426
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 81.4 bits (192), Expect = 2e-14
Identities = 49/176 (27%), Positives = 76/176 (43%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P +LG+ D+A+PR++ F + +G +YPPL+S + G +
Sbjct: 99 LPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGIN 158
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + IS+ S D++P++ +TA
Sbjct: 159 SDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPL 218
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 219 ILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 81.4 bits (192), Expect = 2e-14
Identities = 60/192 (31%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAG-TG*TVYPPLSS--NIAHR 261
+P+ +GA D+AFPR N + F + +G +G T Y LS+ A
Sbjct: 115 LPIQIGAEDMAFPRFNMMSFWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGP 174
Query: 262 GRSVXLAIFSLHLA--GISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXX 435
G + ++ + +A I+S S ++P+ A IT+
Sbjct: 175 GMAYGQTLWGISIAIFCIASLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALL 234
Query: 436 XXXXXAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYIL 582
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI
Sbjct: 235 AFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIA 294
Query: 583 ILPXFGIISHII 618
ILP GI+SHI+
Sbjct: 295 ILPAMGIVSHIL 306
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 80.6 bits (190), Expect = 3e-14
Identities = 54/176 (30%), Positives = 81/176 (46%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VP+++ D+A+P++N I F + T PP S I+ G +
Sbjct: 91 VPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT-----PPYSV-ISAPGPA 144
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ IF L + GISS S Q+PL + ++
Sbjct: 145 ADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYLSSSLIVLVALPTF 204
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 80.2 bits (189), Expect = 4e-14
Identities = 49/176 (27%), Positives = 76/176 (43%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P +LGA D+ FPR++ F V G + PPL++ G +
Sbjct: 168 LPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGYN 227
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + IS+ + ++P+F A+ + A
Sbjct: 228 ADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPAV 287
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 288 ILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 80.2 bits (189), Expect = 4e-14
Identities = 55/154 (35%), Positives = 66/154 (42%)
Frame = +1
Query: 94 PLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRSV 273
PL +GAP +A PR+ N+ F + G G VYPP SS +AH +V
Sbjct: 74 PLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAV 133
Query: 274 XLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXA 453
L IF LHLAGISS ++ LF A
Sbjct: 134 DLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLA 193
Query: 454 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 555
AIT+L R N SFF P G P + F F
Sbjct: 194 AAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 79.0 bits (186), Expect = 9e-14
Identities = 49/176 (27%), Positives = 73/176 (41%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P +L A D+ FPR++ G +YPPL+ G +
Sbjct: 109 LPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGGWFMYPPLTLKEYSPGDN 168
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + IS+ S ++P+F A+ I A
Sbjct: 169 ADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWAMLIFAAMIMIAFPAV 228
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 229 ILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 77.4 bits (182), Expect = 3e-13
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 14/191 (7%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYP---PLSSNIAHR 261
+PL++GA D+AFP++N + + G G T YP L+
Sbjct: 121 IPLMIGADDMAFPKLNMLSYWFMWPAIACFGMSFKYAGGPAAGWTSYPVLADLAQAAPGS 180
Query: 262 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 441
G + + + G SS +F +LP+ + + ITA
Sbjct: 181 GTAQTYWLLGVTFVGFSSMMGSINYMTTIINMRAPGMTFFRLPMTIWGLFITAILQAFAL 240
Query: 442 XXXAGAITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILIL 588
+ + DR T FF P+G GG P+L+QHLF F+ HP VYI++L
Sbjct: 241 PVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQPLLWQHLFWFYSHPAVYIMLL 300
Query: 589 PXFGIISHIIS 621
P G++S ++S
Sbjct: 301 PIMGMVSDMLS 311
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 75.8 bits (178), Expect = 8e-13
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1
Query: 97 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRSVX 276
L+LGAPD+AFPR+NN+ F +V NGAGTG TVYPPLSS AH G SV
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 277 LAIFS 291
LAI+S
Sbjct: 61 LAIYS 65
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 396 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 563
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 73.3 bits (172), Expect = 5e-12
Identities = 48/176 (27%), Positives = 73/176 (41%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL +GA D+AFP +N + V + + G PL+ G
Sbjct: 146 VPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSPGVG 205
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V ++++ + + + ++ +LP V T
Sbjct: 206 VDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAFPIL 265
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 266 GVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 72.1 bits (169), Expect = 1e-11
Identities = 45/176 (25%), Positives = 72/176 (40%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+P +LGA D+ FPR++ + + +G +YPPL++ G
Sbjct: 127 LPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFMYPPLATQDEGLGSD 186
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ L L ++S + +PL+ V +
Sbjct: 187 IWL--LGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWYVLVVGGMILFAFPPL 244
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
+ +R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 245 IAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 71.7 bits (168), Expect = 1e-11
Identities = 45/177 (25%), Positives = 69/177 (38%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL LG D+A PR+N G T Y PL+ + G S
Sbjct: 103 LPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVS 162
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
V + L+ G+ S ++P+F ++ T+
Sbjct: 163 VFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSIFATSILQLLTLGGL 220
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
A + + L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S
Sbjct: 221 TAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS 277
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +1
Query: 235 PLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 414
PL+S+IAH G SV +AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 415 TAFXXXXXXXXXAGAITILLTDR 483
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/55 (45%), Positives = 26/55 (47%)
Frame = +3
Query: 30 FIITFFXSYTYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 194
F FF TYYNW IWKL P NK YKILT PL Y K+N
Sbjct: 15 FCYDFFHGNTYYNWWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 68.9 bits (161), Expect = 1e-10
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 13/196 (6%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSN--IAHRG 264
VPL +GA D+AFPR+N + + G T+Y PL++ I G
Sbjct: 92 VPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNTPAYIPGEG 151
Query: 265 RSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXX 444
+ +L + + +P+F ++ +T +
Sbjct: 152 LGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSLSINLTVWMMLFAFA 211
Query: 445 XXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILP 591
A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+ P
Sbjct: 212 ALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFP 271
Query: 592 XFGIISHIISQERGKK 639
G+++ G++
Sbjct: 272 ALGVMAECFQTFTGRR 287
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 68.5 bits (160), Expect = 1e-10
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNG-AGTG*TVYPPLSSNIAHRGR 267
+PL +G+ D+ +PR+N + + + G TG TVY PLSS
Sbjct: 112 IPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPYL 171
Query: 268 SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 447
A ++ L GI + LPLFV AV A
Sbjct: 172 GADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVWAVFWVAAISWFVFPE 231
Query: 448 XAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIIS 621
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LP G + +S
Sbjct: 232 ITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1
Query: 379 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 558
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 559 GHPEVYILIL 588
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 58.4 bits (135), Expect = 1e-07
Identities = 43/151 (28%), Positives = 50/151 (33%)
Frame = +3
Query: 42 FFXSYTYYNWRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCXKWCRNRM 221
F S TYYN I KL P NK +KIL TPL Y N C K C + +
Sbjct: 51 FLYSNTYYNSGIRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSV 110
Query: 222 NSLPPTFI*YRT*RKIRXSCYFFTTFSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCM 401
NSLP Y T R +F T CM
Sbjct: 111 NSLPAPCCKYLTLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCM 170
Query: 402 SCRDYSXXXXXXTTCFSWSYYNIINRSKLKY 494
+YS + S+YNI K KY
Sbjct: 171 KSNNYSCTSTSFSPSIGSSHYNITYWPKPKY 201
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 56.4 bits (130), Expect = 6e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 553 FFGHPEVYILILPXFGIISHIISQERGKKETF 648
FFGHPEVYILILP FG+ISHI++ GKKE F
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPF 33
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLS 243
VPL++GAPD+AFPR+NN+ F V GAGTG TVYPPL+
Sbjct: 84 VPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = +1
Query: 193 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISS 315
+V G G G TVYPPL+S + H G SV AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 52.8 bits (121), Expect = 7e-06
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +3
Query: 540 TFILIFWTS*SLYFNFTXIWYNFSYYFTRKRKKRNFW 650
+ ++IFW+S SLYFN IWYNF YY+T K K W
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLW 38
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 52.0 bits (119), Expect = 1e-05
Identities = 32/75 (42%), Positives = 39/75 (52%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
VPL+LGAPD+AFPR+NN+ F + G + PL G S
Sbjct: 67 VPLMLGAPDMAFPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPS 124
Query: 271 VXLAIFSLHLAGISS 315
V LAIF LHLAG+SS
Sbjct: 125 VDLAIFPLHLAGVSS 139
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 568 EVYILILPXFGIISHIISQERGKKETF 648
EVYILILP FG+ISHIISQE GKKE F
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAF 181
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 48.8 bits (111), Expect = 1e-04
Identities = 40/176 (22%), Positives = 64/176 (36%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNIAHRGRS 270
+PL+LG ++ FP++ + + G TG YPPL+ N G
Sbjct: 181 IPLMLGTRNVVFPKLLGLSWWLLPPATFAVFMSP-TTGGFQTGWWGYPPLAQN---SGSG 236
Query: 271 VXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXX 450
+ + ++S S ++P+FV + A
Sbjct: 237 IVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPAT 296
Query: 451 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHII 618
+ L+D + F+ G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 297 YTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 399 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 551
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/54 (46%), Positives = 30/54 (55%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNI 252
VP+++GAPD+AFPR+NNI F V GAGTG TV LS I
Sbjct: 83 VPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 46.4 bits (105), Expect = 6e-04
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +1
Query: 553 FFGHPEVYILILPXFGIISHI 615
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TV 228
VP+++G+PD+AFPR+NNI F +V G G+G TV
Sbjct: 87 VPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TVYPPLSSNI 252
+PL+LGA D+AF R+NNI F +V GAGTG TV SS +
Sbjct: 89 MPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.039
Identities = 28/78 (35%), Positives = 36/78 (46%)
Frame = +1
Query: 262 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 441
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 442 XXXAGAITILLTDRNLNT 495
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 39.9 bits (89), Expect = 0.052
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +1
Query: 91 VPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVXNGAGTG*TV 228
+PL++GA D++F R+NNI F +V +GAGTG TV
Sbjct: 84 LPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 517 GGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQERG 633
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 529 ILYQHLF*FFGHPEVYILILPXFGIISHIISQERGK 636
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 523 DPILYQHLF*FFGHPEVYILILPXFGIISHI---ISQERGK 636
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 34.3 bits (75), Expect = 2.6
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 411 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 590
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 591 XI 596
I
Sbjct: 154 SI 155
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 482 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 360
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1;
Bohadschia argus|Rep: Cytochrome oxidase subunit I -
Bohadschia argus
Length = 247
Score = 32.7 bits (71), Expect = 7.8
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +3
Query: 75 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCXKWCRNRMNSLPPTFI*YR 254
+W L P N+ ++L L + + K CRNRMN+LP
Sbjct: 28 LWNLTYTFNDSSPWYGIPPNEQNELLVSPSLFHSTPSISSSGKSCRNRMNNLPTLIQNNS 87
Query: 255 T*RKIRXSCYFFTTFS 302
R + YFF+T S
Sbjct: 88 PRRSVSSPRYFFSTSS 103
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -1
Query: 536 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 399
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,649,256
Number of Sequences: 1657284
Number of extensions: 8257757
Number of successful extensions: 19714
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 18084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19482
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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