Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_K15
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z86062-1|CAI19454.1| 2193|Homo sapiens RP1-121G13.4 protein. 312 7e-85
AY013288-1|AAG45474.1| 1917|Homo sapiens ASC-1 complex subunit P... 312 7e-85
AL591585-1|CAH73862.1| 2193|Homo sapiens RP1-121G13.4 protein. 312 7e-85
AL356122-1|CAI16190.1| 2193|Homo sapiens RP1-121G13.4 protein. 312 7e-85
AL133338-2|CAI21439.1| 2193|Homo sapiens RP1-121G13.4 protein. 312 7e-85
AL121965-1|CAI19627.1| 2193|Homo sapiens RP1-121G13.4 protein. 312 7e-85
AJ223948-1|CAA11679.1| 1257|Homo sapiens RNA helicase protein. 312 7e-85
BC131784-1|AAI31785.1| 595|Homo sapiens ASCC3L1 protein protein. 218 1e-56
BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein. 218 1e-56
BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein. 218 1e-56
BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein. 218 1e-56
BC001417-1|AAH01417.4| 494|Homo sapiens ASCC3L1 protein protein. 218 1e-56
AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specif... 218 1e-56
AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens ... 218 1e-56
AF085356-1|AAD40191.1| 595|Homo sapiens putative RNA helicase p... 218 1e-56
AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein. 218 1e-56
Z70200-1|CAA94089.1| 1701|Homo sapiens U5 snRNP-specific 200kD p... 216 5e-56
AK023840-1|BAB14698.1| 774|Homo sapiens protein ( Homo sapiens ... 146 8e-35
AB204867-1|BAF45466.1| 1435|Homo sapiens helicase-like protein H... 124 4e-28
BX323048-2|CAO03501.1| 1435|Homo sapiens HFM1, ATP-dependent DNA... 123 6e-28
D29641-1|BAA06124.2| 1046|Homo sapiens KIAA0052 protein protein. 44 4e-04
BC113509-1|AAI13510.1| 1042|Homo sapiens superkiller viralicidic... 44 4e-04
BC104996-1|AAI04997.1| 1042|Homo sapiens superkiller viralicidic... 44 4e-04
BC065258-1|AAH65258.1| 1043|Homo sapiens SKIV2L2 protein protein. 44 4e-04
BC031779-1|AAH31779.1| 596|Homo sapiens SKIV2L2 protein protein. 44 4e-04
BC028604-1|AAH28604.3| 1042|Homo sapiens superkiller viralicidic... 44 4e-04
BC014669-1|AAH14669.2| 706|Homo sapiens SKIV2L2 protein protein. 44 4e-04
Z48796-1|CAA88733.1| 1246|Homo sapiens helicase protein. 37 0.055
X98378-1|CAA67024.1| 1246|Homo sapiens SKI2W protein protein. 37 0.055
U09877-1|AAB52523.1| 1245|Homo sapiens helicase-like protein pro... 37 0.055
CR753822-4|CAM26058.1| 1246|Homo sapiens superkiller viralicidic... 37 0.055
BX005143-14|CAM25870.1| 1246|Homo sapiens superkiller viralicidi... 37 0.055
BC015758-1|AAH15758.1| 1246|Homo sapiens superkiller viralicidic... 37 0.055
AY338826-1|AAR08421.2| 2590|Homo sapiens DNA polymerase theta pr... 37 0.055
AL844853-15|CAI41863.1| 1246|Homo sapiens superkiller viralicidi... 37 0.055
AL662849-12|CAI17460.1| 1246|Homo sapiens superkiller viralicidi... 37 0.055
AL645922-13|CAI41730.1| 1246|Homo sapiens superkiller viralicidi... 37 0.055
AL049547-13|CAB89307.1| 1245|Homo sapiens dJ34F7.7 (superkiller ... 37 0.055
AF059675-1|AAC78607.1| 1246|Homo sapiens putative RNA helicase S... 37 0.055
AF019413-6|AAB67978.1| 1246|Homo sapiens helicase protein. 37 0.055
AB209867-1|BAD93104.1| 2214|Homo sapiens DNA polymerase theta va... 37 0.055
AB209605-1|BAD92842.1| 607|Homo sapiens DJ34F7.7 (Superkiller v... 37 0.055
AY032677-1|AAK39635.1| 2724|Homo sapiens DNA polymerase theta pr... 34 0.39
AF436845-1|AAL85274.1| 1101|Homo sapiens DNA helicase HEL308 pro... 34 0.39
BX323048-1|CAI15306.2| 624|Homo sapiens HFM1, ATP-dependent DNA... 33 0.89
AK094079-1|BAC04281.1| 551|Homo sapiens protein ( Homo sapiens ... 33 0.89
AL157766-1|CAI13922.2| 4432|Homo sapiens spastic ataxia of Charl... 30 8.3
AF193556-1|AAF31262.1| 3829|Homo sapiens sacsin protein. 30 8.3
AB018273-1|BAA34450.1| 1004|Homo sapiens KIAA0730 protein protein. 30 8.3
>Z86062-1|CAI19454.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 312 bits (766), Expect = 7e-85
Identities = 141/218 (64%), Positives = 169/218 (77%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVNFPAHLV+IKGTEYYDGK +RYVD PITDVLQMMGRAGRPQFD++G AV+LVHD K
Sbjct: 1642 WGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK 1701
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+FY KFLYEPFPVESSLL VL+DHLNAEI GT+ +KQD L Y+TWTYFFRRL+ NPSYY
Sbjct: 1702 DFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYY 1761
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL + VN FLS L++ SL L ++C+EI +D R++ GRI SYYYL H+T+
Sbjct: 1762 NLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVK 1821
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLLN 654
F L + ++LL +LSD+EEY LPVRHNED +N
Sbjct: 1822 MFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMN 1859
Score = 146 bits (353), Expect = 8e-35
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y K+ +VD+ I DV+Q+ GRAGRPQFD G +++
Sbjct: 805 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 864
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+ Y L + P+ES LE LAD+LNAEI GTV ++ + ++++TY + R+ NP Y
Sbjct: 865 SHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAY 924
Query: 361 NLE----SLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSH 528
+ ++P H +++ L A + E+ ST +GR S+YY+ +
Sbjct: 925 GISHKAYQIDPTLRKHREQLVIEVG-RKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKY 983
Query: 529 RTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
T+ F+ + + D+ ++S +EE+ + VR E
Sbjct: 984 NTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEE 1021
>AY013288-1|AAG45474.1| 1917|Homo sapiens ASC-1 complex subunit P200
protein.
Length = 1917
Score = 312 bits (766), Expect = 7e-85
Identities = 141/218 (64%), Positives = 169/218 (77%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVNFPAHLV+IKGTEYYDGK +RYVD PITDVLQMMGRAGRPQFD++G AV+LVHD K
Sbjct: 1375 WGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK 1434
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+FY KFLYEPFPVESSLL VL+DHLNAEI GT+ +KQD L Y+TWTYFFRRL+ NPSYY
Sbjct: 1435 DFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYY 1494
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL + VN FLS L++ SL L ++C+EI +D R++ GRI SYYYL H+T+
Sbjct: 1495 NLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVK 1554
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLLN 654
F L + ++LL +LSD+EEY LPVRHNED +N
Sbjct: 1555 MFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMN 1592
Score = 146 bits (353), Expect = 8e-35
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y K+ +VD+ I DV+Q+ GRAGRPQFD G +++
Sbjct: 538 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 597
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+ Y L + P+ES LE LAD+LNAEI GTV ++ + ++++TY + R+ NP Y
Sbjct: 598 SHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAY 657
Query: 361 NLE----SLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSH 528
+ ++P H +++ L A + E+ ST +GR S+YY+ +
Sbjct: 658 GISHKAYQIDPTLRKHREQLVIEVG-RKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKY 716
Query: 529 RTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
T+ F+ + + D+ ++S +EE+ + VR E
Sbjct: 717 NTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEE 754
>AL591585-1|CAH73862.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 312 bits (766), Expect = 7e-85
Identities = 141/218 (64%), Positives = 169/218 (77%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVNFPAHLV+IKGTEYYDGK +RYVD PITDVLQMMGRAGRPQFD++G AV+LVHD K
Sbjct: 1642 WGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK 1701
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+FY KFLYEPFPVESSLL VL+DHLNAEI GT+ +KQD L Y+TWTYFFRRL+ NPSYY
Sbjct: 1702 DFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYY 1761
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL + VN FLS L++ SL L ++C+EI +D R++ GRI SYYYL H+T+
Sbjct: 1762 NLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVK 1821
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLLN 654
F L + ++LL +LSD+EEY LPVRHNED +N
Sbjct: 1822 MFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMN 1859
Score = 146 bits (353), Expect = 8e-35
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y K+ +VD+ I DV+Q+ GRAGRPQFD G +++
Sbjct: 805 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 864
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+ Y L + P+ES LE LAD+LNAEI GTV ++ + ++++TY + R+ NP Y
Sbjct: 865 SHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAY 924
Query: 361 NLE----SLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSH 528
+ ++P H +++ L A + E+ ST +GR S+YY+ +
Sbjct: 925 GISHKAYQIDPTLRKHREQLVIEVG-RKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKY 983
Query: 529 RTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
T+ F+ + + D+ ++S +EE+ + VR E
Sbjct: 984 NTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEE 1021
>AL356122-1|CAI16190.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 312 bits (766), Expect = 7e-85
Identities = 141/218 (64%), Positives = 169/218 (77%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVNFPAHLV+IKGTEYYDGK +RYVD PITDVLQMMGRAGRPQFD++G AV+LVHD K
Sbjct: 1642 WGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK 1701
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+FY KFLYEPFPVESSLL VL+DHLNAEI GT+ +KQD L Y+TWTYFFRRL+ NPSYY
Sbjct: 1702 DFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYY 1761
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL + VN FLS L++ SL L ++C+EI +D R++ GRI SYYYL H+T+
Sbjct: 1762 NLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVK 1821
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLLN 654
F L + ++LL +LSD+EEY LPVRHNED +N
Sbjct: 1822 MFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMN 1859
Score = 146 bits (353), Expect = 8e-35
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y K+ +VD+ I DV+Q+ GRAGRPQFD G +++
Sbjct: 805 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 864
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+ Y L + P+ES LE LAD+LNAEI GTV ++ + ++++TY + R+ NP Y
Sbjct: 865 SHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAY 924
Query: 361 NLE----SLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSH 528
+ ++P H +++ L A + E+ ST +GR S+YY+ +
Sbjct: 925 GISHKAYQIDPTLRKHREQLVIEVG-RKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKY 983
Query: 529 RTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
T+ F+ + + D+ ++S +EE+ + VR E
Sbjct: 984 NTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEE 1021
>AL133338-2|CAI21439.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 312 bits (766), Expect = 7e-85
Identities = 141/218 (64%), Positives = 169/218 (77%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVNFPAHLV+IKGTEYYDGK +RYVD PITDVLQMMGRAGRPQFD++G AV+LVHD K
Sbjct: 1642 WGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK 1701
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+FY KFLYEPFPVESSLL VL+DHLNAEI GT+ +KQD L Y+TWTYFFRRL+ NPSYY
Sbjct: 1702 DFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYY 1761
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL + VN FLS L++ SL L ++C+EI +D R++ GRI SYYYL H+T+
Sbjct: 1762 NLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVK 1821
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLLN 654
F L + ++LL +LSD+EEY LPVRHNED +N
Sbjct: 1822 MFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMN 1859
Score = 146 bits (353), Expect = 8e-35
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y K+ +VD+ I DV+Q+ GRAGRPQFD G +++
Sbjct: 805 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 864
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+ Y L + P+ES LE LAD+LNAEI GTV ++ + ++++TY + R+ NP Y
Sbjct: 865 SHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAY 924
Query: 361 NLE----SLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSH 528
+ ++P H +++ L A + E+ ST +GR S+YY+ +
Sbjct: 925 GISHKAYQIDPTLRKHREQLVIEVG-RKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKY 983
Query: 529 RTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
T+ F+ + + D+ ++S +EE+ + VR E
Sbjct: 984 NTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEE 1021
>AL121965-1|CAI19627.1| 2193|Homo sapiens RP1-121G13.4 protein.
Length = 2193
Score = 312 bits (766), Expect = 7e-85
Identities = 141/218 (64%), Positives = 169/218 (77%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVNFPAHLV+IKGTEYYDGK +RYVD PITDVLQMMGRAGRPQFD++G AV+LVHD K
Sbjct: 1642 WGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK 1701
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+FY KFLYEPFPVESSLL VL+DHLNAEI GT+ +KQD L Y+TWTYFFRRL+ NPSYY
Sbjct: 1702 DFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYY 1761
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL + VN FLS L++ SL L ++C+EI +D R++ GRI SYYYL H+T+
Sbjct: 1762 NLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVK 1821
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLLN 654
F L + ++LL +LSD+EEY LPVRHNED +N
Sbjct: 1822 MFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMN 1859
Score = 146 bits (353), Expect = 8e-35
Identities = 75/218 (34%), Positives = 120/218 (55%), Gaps = 4/218 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y K+ +VD+ I DV+Q+ GRAGRPQFD G +++
Sbjct: 805 WGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKL 864
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+ Y L + P+ES LE LAD+LNAEI GTV ++ + ++++TY + R+ NP Y
Sbjct: 865 SHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAY 924
Query: 361 NLE----SLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSH 528
+ ++P H +++ L A + E+ ST +GR S+YY+ +
Sbjct: 925 GISHKAYQIDPTLRKHREQLVIEVG-RKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKY 983
Query: 529 RTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
T+ F+ + + D+ ++S +EE+ + VR E
Sbjct: 984 NTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREEE 1021
>AJ223948-1|CAA11679.1| 1257|Homo sapiens RNA helicase protein.
Length = 1257
Score = 312 bits (766), Expect = 7e-85
Identities = 141/218 (64%), Positives = 169/218 (77%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVNFPAHLV+IKGTEYYDGK +RYVD PITDVLQMMGRAGRPQFD++G AV+LVHD K
Sbjct: 715 WGVNFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKK 774
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+FY KFLYEPFPVESSLL VL+DHLNAEI GT+ +KQD L Y+TWTYFFRRL+ NPSYY
Sbjct: 775 DFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYY 834
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL + VN FLS L++ SL L ++C+EI +D R++ GRI SYYYL H+T+
Sbjct: 835 NLGDVSHDSVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVK 894
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLLN 654
F L + ++LL +LSD+EEY LPVRHNED +N
Sbjct: 895 MFKDRLKPECSTEELLSILSDAEEYTDLPVRHNEDHMN 932
Score = 39.9 bits (89), Expect = 0.008
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 457 IEQDERTVH--STWMGRIXSYYYLSHRTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPV 630
I +ERT + ST +GR S+YY+ + T+ F+ + + D+ ++S +EE+ + V
Sbjct: 31 IRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKV 90
Query: 631 RHNE 642
R E
Sbjct: 91 REEE 94
>BC131784-1|AAI31785.1| 595|Homo sapiens ASCC3L1 protein protein.
Length = 595
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 111 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 170
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 171 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 230
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 231 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 289
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 290 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 326
>BC112891-1|AAI12892.1| 1887|Homo sapiens ASCC3L1 protein protein.
Length = 1887
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 1403 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 1462
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 1463 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 1522
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 1523 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 1581
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 1582 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 1618
Score = 146 bits (355), Expect = 5e-35
Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y ++ R+ ++ D+LQM+GRAGRPQ+D +G +++
Sbjct: 568 WGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGEL 627
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+Y L + P+ES ++ L D LNAEIV G VQ +D +++L + Y + R+L++P+ Y
Sbjct: 628 QYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLY 687
Query: 361 NL--ESLEPQD-VNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHR 531
+ + L+ ++ LV T+ L V+ ++ T +GRI S+YY+++
Sbjct: 688 GISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITND 747
Query: 532 TMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDL 648
T+ ++ L ++ +L RV S S E+ + VR E L
Sbjct: 748 TVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKL 786
>BC065924-1|AAH65924.1| 1821|Homo sapiens ASCC3L1 protein protein.
Length = 1821
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 1337 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 1396
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 1397 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 1456
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 1457 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 1515
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 1516 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 1552
Score = 146 bits (355), Expect = 5e-35
Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y ++ R+ ++ D+LQM+GRAGRPQ+D +G +++
Sbjct: 502 WGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGEL 561
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+Y L + P+ES ++ L D LNAEIV G VQ +D +++L + Y + R+L++P+ Y
Sbjct: 562 QYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLY 621
Query: 361 NL--ESLEPQD-VNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHR 531
+ + L+ ++ LV T+ L V+ ++ T +GRI S+YY+++
Sbjct: 622 GISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITND 681
Query: 532 TMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDL 648
T+ ++ L ++ +L RV S S E+ + VR E L
Sbjct: 682 TVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKL 720
>BC007577-1|AAH07577.1| 1308|Homo sapiens ASCC3L1 protein protein.
Length = 1308
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 824 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 883
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 884 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 943
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 944 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 1002
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 1003 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 1039
Score = 124 bits (299), Expect = 3e-28
Identities = 66/207 (31%), Positives = 116/207 (56%), Gaps = 3/207 (1%)
Frame = +1
Query: 37 KGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXKNFYXKFLYEPFP 216
KGT+ Y ++ R+ ++ D+LQM+GRAGRPQ+D +G +++ +Y L + P
Sbjct: 1 KGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLP 60
Query: 217 VESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYYNL--ESLEPQD- 387
+ES ++ L D LNAEIV G VQ +D +++L + Y + R+L++P+ Y + + L+
Sbjct: 61 IESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPL 120
Query: 388 VNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMAHFSXNLNGN 567
++ LV T+ L V+ ++ T +GRI S+YY+++ T+ ++ L
Sbjct: 121 LDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPT 180
Query: 568 MNVDDLLRVLSDSEEYATLPVRHNEDL 648
++ +L RV S S E+ + VR E L
Sbjct: 181 LSEIELFRVFSLSSEFKNITVREEEKL 207
>BC001417-1|AAH01417.4| 494|Homo sapiens ASCC3L1 protein protein.
Length = 494
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 10 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 69
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 70 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 129
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 130 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 188
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 189 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 225
>AY572488-1|AAS78571.1| 2136|Homo sapiens 200 kDa U5 snRNP-specific
spliceosomal protein protein.
Length = 2136
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 1652 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 1711
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 1712 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 1771
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 1772 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 1830
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 1831 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 1867
Score = 146 bits (355), Expect = 5e-35
Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y ++ R+ ++ D+LQM+GRAGRPQ+D +G +++
Sbjct: 817 WGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGEL 876
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+Y L + P+ES ++ L D LNAEIV G VQ +D +++L + Y + R+L++P+ Y
Sbjct: 877 QYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLY 936
Query: 361 NL--ESLEPQD-VNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHR 531
+ + L+ ++ LV T+ L V+ ++ T +GRI S+YY+++
Sbjct: 937 GISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITND 996
Query: 532 TMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDL 648
T+ ++ L ++ +L RV S S E+ + VR E L
Sbjct: 997 TVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKL 1035
>AK024391-1|BAB14906.1| 1811|Homo sapiens protein ( Homo sapiens cDNA
FLJ14329 fis, clone PLACE4000259, highly similar to
H.sapiens gene for U5 snRNP-specific 200kD protein. ).
Length = 1811
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 1327 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 1386
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 1387 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 1446
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 1447 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 1505
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 1506 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 1542
Score = 144 bits (350), Expect = 2e-34
Identities = 74/219 (33%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y ++ + ++ D+LQM+GRAGRPQ+D +G +++
Sbjct: 492 WGVNLPAHTVIIKGTQVYSPEKGHWTELGALDILQMLGRAGRPQYDTKGEGILITSHGEL 551
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+Y L + P+ES ++ L D LNAEIV G VQ +D +++L + Y + R+L++P+ Y
Sbjct: 552 QYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLY 611
Query: 361 NL--ESLEPQD-VNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHR 531
+ + L+ ++ LV T+ L V+ ++ T +GRI S+YY+++
Sbjct: 612 GISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITND 671
Query: 532 TMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDL 648
T+ ++ L ++ +L RV S S E+ + VR E L
Sbjct: 672 TVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKL 710
>AF085356-1|AAD40191.1| 595|Homo sapiens putative RNA helicase
protein.
Length = 595
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 111 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 170
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 171 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 230
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 231 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 289
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 290 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 326
>AB018331-1|BAA34508.2| 2026|Homo sapiens KIAA0788 protein protein.
Length = 2026
Score = 218 bits (533), Expect = 1e-56
Identities = 101/217 (46%), Positives = 144/217 (66%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T+YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 1542 WGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 1601
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 1602 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 1661
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 1662 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 1720
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 1721 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 1757
Score = 146 bits (355), Expect = 5e-35
Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y ++ R+ ++ D+LQM+GRAGRPQ+D +G +++
Sbjct: 707 WGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGEL 766
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+Y L + P+ES ++ L D LNAEIV G VQ +D +++L + Y + R+L++P+ Y
Sbjct: 767 QYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLY 826
Query: 361 NL--ESLEPQD-VNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHR 531
+ + L+ ++ LV T+ L V+ ++ T +GRI S+YY+++
Sbjct: 827 GISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITND 886
Query: 532 TMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDL 648
T+ ++ L ++ +L RV S S E+ + VR E L
Sbjct: 887 TVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKL 925
>Z70200-1|CAA94089.1| 1701|Homo sapiens U5 snRNP-specific 200kD
protein protein.
Length = 1701
Score = 216 bits (528), Expect = 5e-56
Identities = 101/217 (46%), Positives = 143/217 (65%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WG+N AHLV+I T YY+GK YVD PI DVLQM+G A RP D+EG V++ K
Sbjct: 1217 WGMNVAAHLVIIMDTLYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKK 1276
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+F+ KFLYEP PVES L + DH NAEIV T++ KQD + YLTWT+ +RR+ +NP+YY
Sbjct: 1277 DFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYY 1336
Query: 361 NLESLEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
NL+ + + ++ LS LV+ +L L + C+ IE DE V +G I +YYY+++ T+
Sbjct: 1337 NLQGISHRHLSDHLSELVEQTLSDLEQSKCISIE-DEMDVAPLNLGMIAAYYYINYTTIE 1395
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDLL 651
FS +LN V L+ ++S++ EY +P+RH+ED L
Sbjct: 1396 LFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNL 1432
Score = 146 bits (355), Expect = 5e-35
Identities = 75/219 (34%), Positives = 126/219 (57%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y ++ R+ ++ D+LQM+GRAGRPQ+D +G +++
Sbjct: 382 WGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGEL 441
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+Y L + P+ES ++ L D LNAEIV G VQ +D +++L + Y + R+L++P+ Y
Sbjct: 442 QYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLY 501
Query: 361 NL--ESLEPQD-VNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHR 531
+ + L+ ++ LV T+ L V+ ++ T +GRI S+YY+++
Sbjct: 502 GISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITND 561
Query: 532 TMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDL 648
T+ ++ L ++ +L RV S S E+ + VR E L
Sbjct: 562 TVQTYNQLLKPTLSEIELFRVFSLSSEFKNITVREEEKL 600
>AK023840-1|BAB14698.1| 774|Homo sapiens protein ( Homo sapiens cDNA
FLJ13778 fis, clone PLACE4000431, highly similar to
H.sapiens gene for U5 snRNP-specific 200kD protein. ).
Length = 774
Score = 146 bits (353), Expect = 8e-35
Identities = 75/219 (34%), Positives = 127/219 (57%), Gaps = 3/219 (1%)
Frame = +1
Query: 1 WGVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXK 180
WGVN PAH V+IKGT+ Y ++ R+ ++ D+LQM+GRAGRPQ+D +G +++
Sbjct: 492 WGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGEL 551
Query: 181 NFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYY 360
+Y L + P+ES ++ L D LNAEIV G VQ +D +++L + Y + R+L++P+ Y
Sbjct: 552 QYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLY 611
Query: 361 NL--ESLEPQD-VNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHR 531
+ + L+ ++ LV T+ L V+ ++ T +GRI S+YY+++
Sbjct: 612 GISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITND 671
Query: 532 TMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNEDL 648
T+ ++ L +++ +L RV S S E+ + VR E L
Sbjct: 672 TVQTYNQLLKPSLSEIELFRVFSLSSEFKNITVREVEKL 710
>AB204867-1|BAF45466.1| 1435|Homo sapiens helicase-like protein HFM1
protein.
Length = 1435
Score = 124 bits (298), Expect = 4e-28
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 1/214 (0%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXKN 183
GVN PAHLVVIK T +Y G + + TD+LQM+GRAGRPQFD AV++ ++
Sbjct: 619 GVNLPAHLVVIKSTMHYAGGL--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRD 676
Query: 184 FYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYYN 363
Y + L VESSL L +HLNAEIV T+ + ++ T + R LKNPS+Y
Sbjct: 677 KYIQMLAYRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYG 736
Query: 364 LES-LEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
S L + L L +L+ L + +++++ T GR+ ++YY++ T+
Sbjct: 737 FASGLNKDGIEAKLQELCLKNLNDLSSLDLIKMDEGV-NFKPTEAGRLMAWYYITFETVK 795
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
F ++G + DL+ +++ +E+ + +R NE
Sbjct: 796 KF-YTISGKETLSDLVTLIAGCKEFLDIQLRINE 828
>BX323048-2|CAO03501.1| 1435|Homo sapiens HFM1, ATP-dependent DNA
helicase homolog (S. cerevisiae) protein.
Length = 1435
Score = 123 bits (296), Expect = 6e-28
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 1/214 (0%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXKN 183
GVN PAHLVVIK T +Y G + + TD+LQM+GRAGRPQFD AV++ ++
Sbjct: 619 GVNLPAHLVVIKSTMHYAGGL--FEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRD 676
Query: 184 FYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRRLLKNPSYYN 363
Y + L VESSL L +HLNAEIV T+ + ++ T + R LKNPS+Y
Sbjct: 677 KYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYG 736
Query: 364 LES-LEPQDVNHFLSGLVQTSLDALCAAFCVEIEQDERTVHSTWMGRIXSYYYLSHRTMA 540
S L + L L +L+ L + +++++ T GR+ ++YY++ T+
Sbjct: 737 FASGLNKDGIEAKLQELCLKNLNDLSSLDLIKMDEGV-NFKPTEAGRLMAWYYITFETVK 795
Query: 541 HFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
F ++G + DL+ +++ +E+ + +R NE
Sbjct: 796 KF-YTISGKETLSDLVTLIAGCKEFLDIQLRINE 828
>D29641-1|BAA06124.2| 1046|Homo sapiens KIAA0052 protein protein.
Length = 1046
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQ 174
G+N PA V+ +DGK R++ + +QM GRAGR D+ G+ +++V ++
Sbjct: 492 GINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDEK 546
>BC113509-1|AAI13510.1| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQ 174
G+N PA V+ +DGK R++ + +QM GRAGR D+ G+ +++V ++
Sbjct: 488 GINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDEK 542
>BC104996-1|AAI04997.1| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQ 174
G+N PA V+ +DGK R++ + +QM GRAGR D+ G+ +++V ++
Sbjct: 488 GINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDEK 542
>BC065258-1|AAH65258.1| 1043|Homo sapiens SKIV2L2 protein protein.
Length = 1043
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQ 174
G+N PA V+ +DGK R++ + +QM GRAGR D+ G+ +++V ++
Sbjct: 489 GINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDEK 543
>BC031779-1|AAH31779.1| 596|Homo sapiens SKIV2L2 protein protein.
Length = 596
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQ 174
G+N PA V+ +DGK R++ + +QM GRAGR D+ G+ +++V ++
Sbjct: 42 GINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDEK 96
>BC028604-1|AAH28604.3| 1042|Homo sapiens superkiller viralicidic
activity 2-like 2 (S. cerevisiae) protein.
Length = 1042
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQ 174
G+N PA V+ +DGK R++ + +QM GRAGR D+ G+ +++V ++
Sbjct: 488 GINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDEK 542
>BC014669-1|AAH14669.2| 706|Homo sapiens SKIV2L2 protein protein.
Length = 706
Score = 44.4 bits (100), Expect = 4e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQ 174
G+N PA V+ +DGK R++ + +QM GRAGR D+ G+ +++V ++
Sbjct: 152 GINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRAGRRGMDDRGIVILMVDEK 206
>Z48796-1|CAA88733.1| 1246|Homo sapiens helicase protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>X98378-1|CAA67024.1| 1246|Homo sapiens SKI2W protein protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>U09877-1|AAB52523.1| 1245|Homo sapiens helicase-like protein
protein.
Length = 1245
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 667 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 717
>CR753822-4|CAM26058.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>BX005143-14|CAM25870.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>BC015758-1|AAH15758.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>AY338826-1|AAR08421.2| 2590|Homo sapiens DNA polymerase theta
protein.
Length = 2590
Score = 37.1 bits (82), Expect = 0.055
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXKN 183
GVN PA V+I+ T + G+ + I QM+GRAGR D G ++++ + K+
Sbjct: 449 GVNLPARRVIIR-TPIFGGRP-----LDILTYKQMVGRAGRKGVDTVGESILICKNSEKS 502
Query: 184 FYXKFLYEPF-PVESSLL-----EVLADHLNA---EIVAGTVQTKQDILHYLTWTY 324
L PV S L EV + A IV G T QD+ Y T+
Sbjct: 503 KGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTF 558
>AL844853-15|CAI41863.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>AL662849-12|CAI17460.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>AL645922-13|CAI41730.1| 1246|Homo sapiens superkiller viralicidic
activity 2-like (S. cerevisiae) protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>AL049547-13|CAB89307.1| 1245|Homo sapiens dJ34F7.7 (superkiller
viralicidic activity 2 (S. cerevisiae homolog)-like
(SKI2 protein.
Length = 1245
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 667 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 717
>AF059675-1|AAC78607.1| 1246|Homo sapiens putative RNA helicase
Ski2w protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>AF019413-6|AAB67978.1| 1246|Homo sapiens helicase protein.
Length = 1246
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 668 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 718
>AB209867-1|BAD93104.1| 2214|Homo sapiens DNA polymerase theta
variant protein.
Length = 2214
Score = 37.1 bits (82), Expect = 0.055
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXKN 183
GVN PA V+I+ T + G+ + I QM+GRAGR D G ++++ + K+
Sbjct: 73 GVNLPARRVIIR-TPIFGGRP-----LDILTYKQMVGRAGRKGVDTVGESILICKNSEKS 126
Query: 184 FYXKFLYEPF-PVESSLL-----EVLADHLNA---EIVAGTVQTKQDILHYLTWTY 324
L PV S L EV + A IV G T QD+ Y T+
Sbjct: 127 KGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTF 182
>AB209605-1|BAD92842.1| 607|Homo sapiens DJ34F7.7 (Superkiller
viralicidic activity 2 -like variant protein.
Length = 607
Score = 37.1 bits (82), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVL 162
GVN PA VV +DG R D+ + +QM GRAGR D G ++L
Sbjct: 244 GVNMPARTVVFDSMRKHDGSTFR--DLLPGEYVQMAGRAGRRGLDPTGTVILL 294
>AY032677-1|AAK39635.1| 2724|Homo sapiens DNA polymerase theta
protein.
Length = 2724
Score = 34.3 bits (75), Expect = 0.39
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 8/115 (6%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXKN 183
GVN PA V+I+ T + G+ + I QM+GRAGR D G ++ + +
Sbjct: 584 GVNLPARRVIIR-TPIFGGRP-----LDILTYKQMVGRAGRKGVDTVGSILICKNSEKSK 637
Query: 184 FYXKFLYEPFPVESSLL-----EVLADHLNA---EIVAGTVQTKQDILHYLTWTY 324
PV S L EV + A IV G T QD+ Y T+
Sbjct: 638 GIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTF 692
>AF436845-1|AAL85274.1| 1101|Homo sapiens DNA helicase HEL308
protein.
Length = 1101
Score = 34.3 bits (75), Expect = 0.39
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = +1
Query: 4 GVNFPAHLVVIKGTEYYDGKQKRYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDQXKN 183
GVN PA V+++ KR QM+GRAGR D G +++++ ++ K
Sbjct: 676 GVNLPARRVILRAPYVAKEFLKR------NQYKQMIGRAGRAGIDTIGESILILQEKDKQ 729
Query: 184 FYXKFLYEPFP-VESSLLEVLADHLNA---EIVAGTVQTK-QDILHYLTWTYF 327
+ + +P S L++ + ++ + T DI H++ T+F
Sbjct: 730 QVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGLKIATNLDDIYHFMNGTFF 782
>BX323048-1|CAI15306.2| 624|Homo sapiens HFM1, ATP-dependent DNA
helicase homolog (S. cerevisiae) protein.
Length = 624
Score = 33.1 bits (72), Expect = 0.89
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 487 TWMGRIXSYYYLSHRTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
T GR+ ++YY++ T+ F ++G + DL+ +++ +E+ + +R NE
Sbjct: 33 TEAGRLMAWYYITFETVKKF-YTISGKETLSDLVTLIAGCKEFLDIQLRINE 83
>AK094079-1|BAC04281.1| 551|Homo sapiens protein ( Homo sapiens
cDNA FLJ36760 fis, clone UTERU2018867. ).
Length = 551
Score = 33.1 bits (72), Expect = 0.89
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 487 TWMGRIXSYYYLSHRTMAHFSXNLNGNMNVDDLLRVLSDSEEYATLPVRHNE 642
T GR+ ++YY++ T+ F ++G + DL+ +++ +E+ + +R NE
Sbjct: 10 TEAGRLMAWYYITFETVKKF-YTISGKETLSDLVTLIAGCKEFLDIQLRINE 60
>AL157766-1|CAI13922.2| 4432|Homo sapiens spastic ataxia of
Charlevoix-Saguenay (sacsin) protein.
Length = 4432
Score = 29.9 bits (64), Expect = 8.3
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Frame = +1
Query: 157 VLVHDQXKNFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRR 336
V+++ + ++ + +LY+ P+E L HL E + + TKQ + R
Sbjct: 3664 VVINLEYESDFKPYLYK-LPLELGTFHQLFKHLGTEDI---ISTKQ-------YVEVLSR 3712
Query: 337 LLKNPSYYNLESLEPQDVNHFLSGLVQT-SLDALCAAFCVEIEQDERTVHSTWMGRIXSY 513
+ KN L+ E + V +SGL ++ D++ +E +D + GR+
Sbjct: 3713 IFKNSEGKQLDPNEMRTVKRVVSGLFRSLQNDSVKVRSDLENVRDLALYLPSQDGRLVKS 3772
Query: 514 YYLSHRTMAHFSXNLNGNMNVDDLL 588
L H+ + GN+ V L+
Sbjct: 3773 SILVFDDAPHYKSRIQGNIGVQMLV 3797
>AF193556-1|AAF31262.1| 3829|Homo sapiens sacsin protein.
Length = 3829
Score = 29.9 bits (64), Expect = 8.3
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Frame = +1
Query: 157 VLVHDQXKNFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRR 336
V+++ + ++ + +LY+ P+E L HL E + + TKQ + R
Sbjct: 3061 VVINLEYESDFKPYLYK-LPLELGTFHQLFKHLGTEDI---ISTKQ-------YVEVLSR 3109
Query: 337 LLKNPSYYNLESLEPQDVNHFLSGLVQT-SLDALCAAFCVEIEQDERTVHSTWMGRIXSY 513
+ KN L+ E + V +SGL ++ D++ +E +D + GR+
Sbjct: 3110 IFKNSEGKQLDPNEMRTVKRVVSGLFRSLQNDSVKVRSDLENVRDLALYLPSQDGRLVKS 3169
Query: 514 YYLSHRTMAHFSXNLNGNMNVDDLL 588
L H+ + GN+ V L+
Sbjct: 3170 SILVFDDAPHYKSRIQGNIGVQMLV 3194
>AB018273-1|BAA34450.1| 1004|Homo sapiens KIAA0730 protein protein.
Length = 1004
Score = 29.9 bits (64), Expect = 8.3
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Frame = +1
Query: 157 VLVHDQXKNFYXKFLYEPFPVESSLLEVLADHLNAEIVAGTVQTKQDILHYLTWTYFFRR 336
V+++ + ++ + +LY+ P+E L HL E + + TKQ + R
Sbjct: 236 VVINLEYESDFKPYLYK-LPLELGTFHQLFKHLGTEDI---ISTKQ-------YVEVLSR 284
Query: 337 LLKNPSYYNLESLEPQDVNHFLSGLVQT-SLDALCAAFCVEIEQDERTVHSTWMGRIXSY 513
+ KN L+ E + V +SGL ++ D++ +E +D + GR+
Sbjct: 285 IFKNSEGKQLDPNEMRTVKRVVSGLFRSLQNDSVKVRSDLENVRDLALYLPSQDGRLVKS 344
Query: 514 YYLSHRTMAHFSXNLNGNMNVDDLL 588
L H+ + GN+ V L+
Sbjct: 345 SILVFDDAPHYKSRIQGNIGVQMLV 369
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,950,538
Number of Sequences: 237096
Number of extensions: 1770742
Number of successful extensions: 4324
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 4041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4287
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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