Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_K15
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   1.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.6  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   6.0  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   6.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.9  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 415 GRDPTGNGSRLAAPSSPNCNTR 350
           GR    NGS   +P SP  N+R
Sbjct: 310 GRGSVHNGSNNGSPRSPESNSR 331


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 297 HPTLFDVDLFLPEVTKKSLVLQFGELGAARR 389
           +P +FD D FLPE T       F    A  R
Sbjct: 456 NPDVFDPDNFLPEKTANRHYYAFVPFSAGPR 486


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 298 ILHYLTWTYFFRRLLKNPSYYNLESLEPQD 387
           IL  LTWTY          Y N++ +   D
Sbjct: 10  ILSLLTWTYAEELYSDKYDYVNIDEILAND 39


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 298 ILHYLTWTYFFRRLLKNPSYYNLESLEPQD 387
           IL  LTWTY          Y N++ +   D
Sbjct: 10  ILSLLTWTYAEELYSDKYDYVNIDEILAND 39


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 517 YLSHRTMAHFSXNLNGNMNVDDL 585
           YL     +H+  N NGN+  ++L
Sbjct: 236 YLVSIMFSHYDRNNNGNLEREEL 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,731
Number of Sequences: 438
Number of extensions: 3636
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)